RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 A0A087WVE0 104 aa3.76□□□□□ -1.81
CTDNEP1-203ENST00000570385 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
CTDNEP1-203ENST00000570385 KMT2DO14686 5537 aa3.76□□□□□ -1.81
CTDNEP1-203ENST00000570385 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
CTDNEP1-203ENST00000570385 TP53AIP1Q9HCN2 124 aa3.72□□□□□ -1.81
CTDNEP1-203ENST00000570385 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
CTDNEP1-203ENST00000570385 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
CTDNEP1-203ENST00000570385 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
CTDNEP1-203ENST00000570385 K7EP34 96 aa3.69□□□□□ -1.82
CTDNEP1-203ENST00000570385 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
CTDNEP1-203ENST00000570385 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
CTDNEP1-203ENST00000570385 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
CTDNEP1-203ENST00000570385 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
CTDNEP1-203ENST00000570385 H3BS24 57 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 SPRR2EP22531 72 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 SPRR2BP35325 72 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 SPRR2AP35326 72 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
CTDNEP1-203ENST00000570385 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
CTDNEP1-203ENST00000570385 LOC101927531A0A1B0GV80 90 aa3.64□□□□□ -1.83
CTDNEP1-203ENST00000570385 LOC105371267A0A1B0GV96 52 aa3.64□□□□□ -1.83
CTDNEP1-203ENST00000570385 NDUFC1O43677 76 aa3.64□□□□□ -1.83
CTDNEP1-203ENST00000570385 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
CTDNEP1-203ENST00000570385 COL5A1-AS1Q5SY13 56 aa3.63□□□□□ -1.83
CTDNEP1-203ENST00000570385 A8MUN3 132 aa3.62□□□□□ -1.83
CTDNEP1-203ENST00000570385 MT1XP80297 61 aa3.62□□□□□ -1.83
CTDNEP1-203ENST00000570385 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
CTDNEP1-203ENST00000570385 H0YAA0 97 aa3.6□□□□□ -1.83
CTDNEP1-203ENST00000570385 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
CTDNEP1-203ENST00000570385 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
CTDNEP1-203ENST00000570385 H0Y9P7 68 aa3.59□□□□□ -1.83
CTDNEP1-203ENST00000570385 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
CTDNEP1-203ENST00000570385 ACYP1P07311 99 aa3.58□□□□□ -1.84
CTDNEP1-203ENST00000570385 GTF2H5Q6ZYL4 71 aa3.58□□□□□ -1.84
CTDNEP1-203ENST00000570385 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
CTDNEP1-203ENST00000570385 F8W1H4 67 aa3.57□□□□□ -1.84
CTDNEP1-203ENST00000570385 UQCRQO14949 82 aa3.57□□□□□ -1.84
CTDNEP1-203ENST00000570385 HIST1H4AP62805 103 aaKnown RBP3.57□□□□□ -1.84
CTDNEP1-203ENST00000570385 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
CTDNEP1-203ENST00000570385 ATOX1O00244 68 aa3.55□□□□□ -1.84
CTDNEP1-203ENST00000570385 P0C880 135 aa3.54□□□□□ -1.84
CTDNEP1-203ENST00000570385 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
CTDNEP1-203ENST00000570385 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
CTDNEP1-203ENST00000570385 SPRR2DP22532 72 aa3.53□□□□□ -1.84
CTDNEP1-203ENST00000570385 LINC00208Q96KT6 92 aa3.53□□□□□ -1.84
CTDNEP1-203ENST00000570385 R4GN34 69 aa3.53□□□□□ -1.84
CTDNEP1-203ENST00000570385 M0QZ58 72 aa3.52□□□□□ -1.85
CTDNEP1-203ENST00000570385 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
CTDNEP1-203ENST00000570385 LINC01554Q52M75 96 aa3.51□□□□□ -1.85
CTDNEP1-203ENST00000570385 PCP4P48539 62 aa3.5□□□□□ -1.85
CTDNEP1-203ENST00000570385 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CTDNEP1-203ENST00000570385 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
CTDNEP1-203ENST00000570385 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
CTDNEP1-203ENST00000570385 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
CTDNEP1-203ENST00000570385 C20orf197Q8N268 126 aa3.47□□□□□ -1.85
CTDNEP1-203ENST00000570385 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
CTDNEP1-203ENST00000570385 MP68P56378 58 aa3.46□□□□□ -1.86
CTDNEP1-203ENST00000570385 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
CTDNEP1-203ENST00000570385 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
CTDNEP1-203ENST00000570385 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
CTDNEP1-203ENST00000570385 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
CTDNEP1-203ENST00000570385 DMAC1Q96GE9 116 aa3.4□□□□□ -1.87
CTDNEP1-203ENST00000570385 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
CTDNEP1-203ENST00000570385 MT-ATP8P03928 68 aa3.38□□□□□ -1.87
CTDNEP1-203ENST00000570385 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
CTDNEP1-203ENST00000570385 H3BPC8 53 aa3.35□□□□□ -1.87
CTDNEP1-203ENST00000570385 SCGB1A1P11684 91 aa3.34□□□□□ -1.87
CTDNEP1-203ENST00000570385 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
CTDNEP1-203ENST00000570385 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
CTDNEP1-203ENST00000570385 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CTDNEP1-203ENST00000570385 ACYP2P14621 99 aa3.3□□□□□ -1.88
CTDNEP1-203ENST00000570385 SEC61GP60059 68 aa3.3□□□□□ -1.88
CTDNEP1-203ENST00000570385 SPTSSBQ8NFR3 76 aa3.27□□□□□ -1.89
CTDNEP1-203ENST00000570385 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CTDNEP1-203ENST00000570385 A0A1B0GV90 55 aa3.26□□□□□ -1.89
CTDNEP1-203ENST00000570385 CHKB-CPT1BH3BT56 60 aa3.26□□□□□ -1.89
CTDNEP1-203ENST00000570385 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
CTDNEP1-203ENST00000570385 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
CTDNEP1-203ENST00000570385 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
CTDNEP1-203ENST00000570385 J3QR89 54 aa3.21□□□□□ -1.9
CTDNEP1-203ENST00000570385 MT1EP04732 61 aa3.21□□□□□ -1.9
CTDNEP1-203ENST00000570385 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
CTDNEP1-203ENST00000570385 SNURFQ9Y675 71 aa3.19□□□□□ -1.9
CTDNEP1-203ENST00000570385 A0A0D9SG42 100 aa3.16□□□□□ -1.9
CTDNEP1-203ENST00000570385 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
CTDNEP1-203ENST00000570385 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CTDNEP1-203ENST00000570385 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
CTDNEP1-203ENST00000570385 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
CTDNEP1-203ENST00000570385 MT4P47944 62 aa3.13□□□□□ -1.91
CTDNEP1-203ENST00000570385 V9GYY9 64 aa3.13□□□□□ -1.91
CTDNEP1-203ENST00000570385 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
CTDNEP1-203ENST00000570385 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
CTDNEP1-203ENST00000570385 MT1GP13640 62 aa3.1□□□□□ -1.91
CTDNEP1-203ENST00000570385 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
CTDNEP1-203ENST00000570385 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
CTDNEP1-203ENST00000570385 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
CTDNEP1-203ENST00000570385 MT1MQ8N339 61 aa3.07□□□□□ -1.92
CTDNEP1-203ENST00000570385 COA5Q86WW8 74 aa3.06□□□□□ -1.92
CTDNEP1-203ENST00000570385 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms