RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 KRTAP25-1Q3LHN0 102 aa10.54□□□□□ -0.72
SCRT1-201ENST00000569446 C10orf95Q9H7T3 257 aa10.53□□□□□ -0.72
SCRT1-201ENST00000569446 FAT2Q9NYQ8 4349 aa10.53□□□□□ -0.72
SCRT1-201ENST00000569446 ROMO1P60602 79 aa10.51□□□□□ -0.73
SCRT1-201ENST00000569446 H3BS24 57 aa10.51□□□□□ -0.73
SCRT1-201ENST00000569446 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
SCRT1-201ENST00000569446 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
SCRT1-201ENST00000569446 M0QZ58 72 aa10.39□□□□□ -0.75
SCRT1-201ENST00000569446 R4GN34 69 aa10.39□□□□□ -0.75
SCRT1-201ENST00000569446 SACSQ9NZJ4 4579 aa10.37□□□□□ -0.75
SCRT1-201ENST00000569446 PKD1P98161 4303 aa10.37□□□□□ -0.75
SCRT1-201ENST00000569446 KRTAP13-4Q3LI77 160 aa10.36□□□□□ -0.75
SCRT1-201ENST00000569446 APOBP04114 4563 aaKnown RBP10.36□□□□□ -0.75
SCRT1-201ENST00000569446 KIAA1109Q2LD37 5005 aa10.33□□□□□ -0.76
SCRT1-201ENST00000569446 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
SCRT1-201ENST00000569446 KRTAP10-6P60371 365 aaPredicted RBP10.23□□□□□ -0.77
SCRT1-201ENST00000569446 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
SCRT1-201ENST00000569446 RYR1P21817 5038 aa10.19□□□□□ -0.78
SCRT1-201ENST00000569446 KRTAP12-2P59991 146 aa10.17□□□□□ -0.78
SCRT1-201ENST00000569446 CAMK2N1Q7Z7J9 78 aa10.17□□□□□ -0.78
SCRT1-201ENST00000569446 RYR3Q15413 4870 aa10.09□□□□□ -0.79
SCRT1-201ENST00000569446 SEC61BP60468 96 aaKnown RBP10.08□□□□□ -0.8
SCRT1-201ENST00000569446 RYR2Q92736 4967 aa10.07□□□□□ -0.8
SCRT1-201ENST00000569446 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
SCRT1-201ENST00000569446 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
SCRT1-201ENST00000569446 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
SCRT1-201ENST00000569446 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
SCRT1-201ENST00000569446 KRTAP17-1Q9BYP8 105 aa10.01□□□□□ -0.81
SCRT1-201ENST00000569446 LRP2P98164 4655 aa10.01□□□□□ -0.81
SCRT1-201ENST00000569446 NDUFAF8A1L188 74 aa10□□□□□ -0.81
SCRT1-201ENST00000569446 HSPG2P98160 4391 aa9.94□□□□□ -0.82
SCRT1-201ENST00000569446 KRTAP12-1P59990 96 aa9.93□□□□□ -0.82
SCRT1-201ENST00000569446 M0R2T5 61 aa9.9□□□□□ -0.83
SCRT1-201ENST00000569446 LPAP08519 4548 aa9.77□□□□□ -0.84
SCRT1-201ENST00000569446 PKHD1L1Q86WI1 4243 aa9.72□□□□□ -0.85
SCRT1-201ENST00000569446 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
SCRT1-201ENST00000569446 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
SCRT1-201ENST00000569446 LUZP6Q538Z0 58 aa9.58□□□□□ -0.88
SCRT1-201ENST00000569446 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
SCRT1-201ENST00000569446 MUC2Q02817 5179 aa9.51□□□□□ -0.89
SCRT1-201ENST00000569446 KRTAP4-1Q9BYQ7 146 aa9.49□□□□□ -0.89
SCRT1-201ENST00000569446 TNXBP22105 4242 aa9.47□□□□□ -0.89
SCRT1-201ENST00000569446 PLAC4Q8WY50 150 aa9.46□□□□□ -0.89
SCRT1-201ENST00000569446 HERC2O95714 4834 aa9.37□□□□□ -0.91
SCRT1-201ENST00000569446 TNP1P09430 55 aa9.29□□□□□ -0.92
SCRT1-201ENST00000569446 KRTAP15-1Q3LI76 137 aa9.26□□□□□ -0.93
SCRT1-201ENST00000569446 KRTAP10-10P60014 251 aa9.17□□□□□ -0.94
SCRT1-201ENST00000569446 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
SCRT1-201ENST00000569446 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
SCRT1-201ENST00000569446 HERC1Q15751 4861 aa9.03□□□□□ -0.96
SCRT1-201ENST00000569446 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
SCRT1-201ENST00000569446 A0A0A0MQY5 61 aa8.97□□□□□ -0.97
SCRT1-201ENST00000569446 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SCRT1-201ENST00000569446 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
SCRT1-201ENST00000569446 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
SCRT1-201ENST00000569446 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
SCRT1-201ENST00000569446 KRTAP19-2Q3LHN2 52 aa8.58□□□□□ -1.04
SCRT1-201ENST00000569446 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
SCRT1-201ENST00000569446 HMCN2Q8NDA2 5059 aa8.49□□□□□ -1.05
SCRT1-201ENST00000569446 MT1HP80294 61 aa8.48□□□□□ -1.05
SCRT1-201ENST00000569446 MT1FP04733 61 aa8.45□□□□□ -1.06
SCRT1-201ENST00000569446 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
SCRT1-201ENST00000569446 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
SCRT1-201ENST00000569446 MT2AP02795 61 aa8.4□□□□□ -1.06
SCRT1-201ENST00000569446 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
SCRT1-201ENST00000569446 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
SCRT1-201ENST00000569446 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
SCRT1-201ENST00000569446 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
SCRT1-201ENST00000569446 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.09
SCRT1-201ENST00000569446 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
SCRT1-201ENST00000569446 USH2AO75445 5202 aa8.13□□□□□ -1.11
SCRT1-201ENST00000569446 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
SCRT1-201ENST00000569446 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
SCRT1-201ENST00000569446 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
SCRT1-201ENST00000569446 MT1BP07438 61 aa7.95□□□□□ -1.14
SCRT1-201ENST00000569446 MT1XP80297 61 aa7.94□□□□□ -1.14
SCRT1-201ENST00000569446 KMT2DO14686 5537 aa7.93□□□□□ -1.14
SCRT1-201ENST00000569446 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
SCRT1-201ENST00000569446 KRTAP8-1Q8IUC2 63 aa7.84□□□□□ -1.15
SCRT1-201ENST00000569446 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
SCRT1-201ENST00000569446 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.16
SCRT1-201ENST00000569446 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
SCRT1-201ENST00000569446 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
SCRT1-201ENST00000569446 SPRR5A0A1B0GTR4 108 aa7.71□□□□□ -1.17
SCRT1-201ENST00000569446 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
SCRT1-201ENST00000569446 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
SCRT1-201ENST00000569446 LCE2BO14633 110 aa7.6□□□□□ -1.19
SCRT1-201ENST00000569446 OBSCNQ5VST9 7968 aa7.57□□□□□ -1.2
SCRT1-201ENST00000569446 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
SCRT1-201ENST00000569446 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
SCRT1-201ENST00000569446 LCE3CQ5T5A8 94 aa7.46□□□□□ -1.22
SCRT1-201ENST00000569446 SYNE1Q8NF91 8797 aaKnown RBP7.39□□□□□ -1.23
SCRT1-201ENST00000569446 INE1O15225 51 aa7.37□□□□□ -1.23
SCRT1-201ENST00000569446 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
SCRT1-201ENST00000569446 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
SCRT1-201ENST00000569446 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
SCRT1-201ENST00000569446 KRTAP9-6A8MVA2 160 aa7.06□□□□□ -1.28
SCRT1-201ENST00000569446 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
SCRT1-201ENST00000569446 MT1GP13640 62 aa7□□□□□ -1.29
SCRT1-201ENST00000569446 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms