RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 DYNC2H1Q8NCM8 4307 aaKnown RBP5.31□□□□□ -1.56
FANCA-230ENST00000568369 FAT2Q9NYQ8 4349 aa5.28□□□□□ -1.56
FANCA-230ENST00000568369 MEGF8Q7Z7M0 2845 aa5.27□□□□□ -1.57
FANCA-230ENST00000568369 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
FANCA-230ENST00000568369 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
FANCA-230ENST00000568369 PRKDCP78527 4128 aaKnown RBP5.24□□□□□ -1.57
FANCA-230ENST00000568369 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
FANCA-230ENST00000568369 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
FANCA-230ENST00000568369 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
FANCA-230ENST00000568369 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
FANCA-230ENST00000568369 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
FANCA-230ENST00000568369 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
FANCA-230ENST00000568369 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
FANCA-230ENST00000568369 PRO2289Q9P1D8 64 aa5.11□□□□□ -1.59
FANCA-230ENST00000568369 PKD1P98161 4303 aa5.06□□□□□ -1.6
FANCA-230ENST00000568369 HYDINQ4G0P3 5121 aa5.05□□□□□ -1.6
FANCA-230ENST00000568369 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
FANCA-230ENST00000568369 PKHD1P08F94 4074 aa5.05□□□□□ -1.6
FANCA-230ENST00000568369 VPS13BQ7Z7G8 4022 aa5.04□□□□□ -1.6
FANCA-230ENST00000568369 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
FANCA-230ENST00000568369 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
FANCA-230ENST00000568369 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
FANCA-230ENST00000568369 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
FANCA-230ENST00000568369 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
FANCA-230ENST00000568369 SACSQ9NZJ4 4579 aa4.84□□□□□ -1.63
FANCA-230ENST00000568369 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
FANCA-230ENST00000568369 LPAP08519 4548 aa4.78□□□□□ -1.64
FANCA-230ENST00000568369 HSPG2P98160 4391 aa4.77□□□□□ -1.65
FANCA-230ENST00000568369 PKHD1L1Q86WI1 4243 aa4.77□□□□□ -1.65
FANCA-230ENST00000568369 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
FANCA-230ENST00000568369 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
FANCA-230ENST00000568369 FAT1Q14517 4588 aa4.68□□□□□ -1.66
FANCA-230ENST00000568369 INE1O15225 51 aa4.66□□□□□ -1.66
FANCA-230ENST00000568369 DYNC1H1Q14204 4646 aaKnown RBP4.66□□□□□ -1.66
FANCA-230ENST00000568369 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
FANCA-230ENST00000568369 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
FANCA-230ENST00000568369 TNXBP22105 4242 aa4.63□□□□□ -1.67
FANCA-230ENST00000568369 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
FANCA-230ENST00000568369 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
FANCA-230ENST00000568369 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
FANCA-230ENST00000568369 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
FANCA-230ENST00000568369 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
FANCA-230ENST00000568369 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
FANCA-230ENST00000568369 KMT2CQ8NEZ4 4911 aaKnown RBP4.5□□□□□ -1.69
FANCA-230ENST00000568369 RYR1P21817 5038 aa4.45□□□□□ -1.7
FANCA-230ENST00000568369 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
FANCA-230ENST00000568369 ABCA13Q86UQ4 5058 aa4.37□□□□□ -1.71
FANCA-230ENST00000568369 LRP2P98164 4655 aa4.35□□□□□ -1.71
FANCA-230ENST00000568369 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
FANCA-230ENST00000568369 RYR2Q92736 4967 aa4.3□□□□□ -1.72
FANCA-230ENST00000568369 RYR3Q15413 4870 aa4.28□□□□□ -1.72
FANCA-230ENST00000568369 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
FANCA-230ENST00000568369 MUC2Q02817 5179 aa4.24□□□□□ -1.73
FANCA-230ENST00000568369 MT1HP80294 61 aa4.22□□□□□ -1.73
FANCA-230ENST00000568369 MT2AP02795 61 aa4.21□□□□□ -1.74
FANCA-230ENST00000568369 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
FANCA-230ENST00000568369 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
FANCA-230ENST00000568369 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
FANCA-230ENST00000568369 MT1FP04733 61 aa4.13□□□□□ -1.75
FANCA-230ENST00000568369 PCLOQ9Y6V0 5065 aa4.11□□□□□ -1.75
FANCA-230ENST00000568369 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
FANCA-230ENST00000568369 EPPK1P58107 5090 aaKnown RBP4.11□□□□□ -1.75
FANCA-230ENST00000568369 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.75
FANCA-230ENST00000568369 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
FANCA-230ENST00000568369 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
FANCA-230ENST00000568369 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
FANCA-230ENST00000568369 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
FANCA-230ENST00000568369 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
FANCA-230ENST00000568369 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
FANCA-230ENST00000568369 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
FANCA-230ENST00000568369 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.78
FANCA-230ENST00000568369 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
FANCA-230ENST00000568369 MT1XP80297 61 aa3.86□□□□□ -1.79
FANCA-230ENST00000568369 MT1BP07438 61 aa3.83□□□□□ -1.8
FANCA-230ENST00000568369 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
FANCA-230ENST00000568369 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
FANCA-230ENST00000568369 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
FANCA-230ENST00000568369 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
FANCA-230ENST00000568369 HERC2O95714 4834 aa3.78□□□□□ -1.8
FANCA-230ENST00000568369 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
FANCA-230ENST00000568369 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
FANCA-230ENST00000568369 HERC1Q15751 4861 aa3.74□□□□□ -1.81
FANCA-230ENST00000568369 RNF213Q63HN8 5207 aa3.71□□□□□ -1.82
FANCA-230ENST00000568369 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
FANCA-230ENST00000568369 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
FANCA-230ENST00000568369 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
FANCA-230ENST00000568369 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
FANCA-230ENST00000568369 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
FANCA-230ENST00000568369 MT1GP13640 62 aa3.62□□□□□ -1.83
FANCA-230ENST00000568369 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
FANCA-230ENST00000568369 KMT2DO14686 5537 aa3.57□□□□□ -1.84
FANCA-230ENST00000568369 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
FANCA-230ENST00000568369 SPRR2EP22531 72 aa3.52□□□□□ -1.85
FANCA-230ENST00000568369 SPRR2BP35325 72 aa3.52□□□□□ -1.85
FANCA-230ENST00000568369 SPRR2AP35326 72 aa3.52□□□□□ -1.85
FANCA-230ENST00000568369 LCE2BO14633 110 aa3.51□□□□□ -1.85
FANCA-230ENST00000568369 MT1LQ93083 61 aa3.5□□□□□ -1.85
FANCA-230ENST00000568369 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
FANCA-230ENST00000568369 USH2AO75445 5202 aa3.48□□□□□ -1.85
FANCA-230ENST00000568369 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms