RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
LINC01541-202ENST00000568095 ZNF861PO60384 105 aa3.14□□□□□ -1.91
LINC01541-202ENST00000568095 KRTAP10-2P60368 255 aa3.14□□□□□ -1.91
LINC01541-202ENST00000568095 FAT1Q14517 4588 aa3.14□□□□□ -1.91
LINC01541-202ENST00000568095 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
LINC01541-202ENST00000568095 IGKV2-30P06310 120 aa3.13□□□□□ -1.91
LINC01541-202ENST00000568095 TNXBP22105 4242 aa3.13□□□□□ -1.91
LINC01541-202ENST00000568095 CSAG1Q6PB30 78 aa3.13□□□□□ -1.91
LINC01541-202ENST00000568095 FAT3Q8TDW7 4589 aa3.12□□□□□ -1.91
LINC01541-202ENST00000568095 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
LINC01541-202ENST00000568095 RYR1P21817 5038 aa3.1□□□□□ -1.91
LINC01541-202ENST00000568095 EPPK1P58107 5090 aaKnown RBP3.1□□□□□ -1.91
LINC01541-202ENST00000568095 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
LINC01541-202ENST00000568095 PSORS1C2Q9UIG4 136 aa3.08□□□□□ -1.92
LINC01541-202ENST00000568095 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
LINC01541-202ENST00000568095 A8MUU9 505 aa3.07□□□□□ -1.92
LINC01541-202ENST00000568095 Q8N1X5 172 aa3.07□□□□□ -1.92
LINC01541-202ENST00000568095 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
LINC01541-202ENST00000568095 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
LINC01541-202ENST00000568095 KRTAP10-4P60372 401 aaPredicted RBP3.06□□□□□ -1.92
LINC01541-202ENST00000568095 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
LINC01541-202ENST00000568095 SSBP3-AS1Q7Z2R9 100 aa3.06□□□□□ -1.92
LINC01541-202ENST00000568095 CIRBP-AS1Q8TBR5 109 aa3.06□□□□□ -1.92
LINC01541-202ENST00000568095 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
LINC01541-202ENST00000568095 SPINK6Q6UWN8 80 aa3.06□□□□□ -1.92
LINC01541-202ENST00000568095 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
LINC01541-202ENST00000568095 H0YAA0 97 aa3.04□□□□□ -1.92
LINC01541-202ENST00000568095 ROMO1P60602 79 aa3.04□□□□□ -1.92
LINC01541-202ENST00000568095 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
LINC01541-202ENST00000568095 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
LINC01541-202ENST00000568095 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
LINC01541-202ENST00000568095 KRTAP1-4P0C5Y4 121 aa3□□□□□ -1.93
LINC01541-202ENST00000568095 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
LINC01541-202ENST00000568095 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
LINC01541-202ENST00000568095 BIRC6Q9NR09 4857 aa2.99□□□□□ -1.93
LINC01541-202ENST00000568095 P0C880 135 aa2.98□□□□□ -1.93
LINC01541-202ENST00000568095 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
LINC01541-202ENST00000568095 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
LINC01541-202ENST00000568095 HERC2O95714 4834 aa2.97□□□□□ -1.93
LINC01541-202ENST00000568095 H1FX-AS1Q4G0G2 97 aa2.96□□□□□ -1.94
LINC01541-202ENST00000568095 TYMSOSQ8TAI1 123 aa2.96□□□□□ -1.94
LINC01541-202ENST00000568095 A0A1B0GU33 70 aa2.95□□□□□ -1.94
LINC01541-202ENST00000568095 ABCA13Q86UQ4 5058 aa2.93□□□□□ -1.94
LINC01541-202ENST00000568095 SPINK1P00995 79 aa2.93□□□□□ -1.94
LINC01541-202ENST00000568095 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
LINC01541-202ENST00000568095 K7ERS5 55 aa2.92□□□□□ -1.94
LINC01541-202ENST00000568095 SMR3BP02814 79 aaPredicted RBP2.9□□□□□ -1.94
LINC01541-202ENST00000568095 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
LINC01541-202ENST00000568095 C20orf166-AS1Q96NR2 134 aa2.9□□□□□ -1.95
LINC01541-202ENST00000568095 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.95
LINC01541-202ENST00000568095 COX6B2Q6YFQ2 88 aa2.88□□□□□ -1.95
LINC01541-202ENST00000568095 Q5VSD8 79 aa2.88□□□□□ -1.95
LINC01541-202ENST00000568095 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
LINC01541-202ENST00000568095 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
LINC01541-202ENST00000568095 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
LINC01541-202ENST00000568095 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
LINC01541-202ENST00000568095 CRIPTQ9P021 101 aa2.85□□□□□ -1.95
LINC01541-202ENST00000568095 FLG2Q5D862 2391 aaPredicted RBP2.85□□□□□ -1.95
LINC01541-202ENST00000568095 MUC17Q685J3 4493 aa2.85□□□□□ -1.95
LINC01541-202ENST00000568095 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
LINC01541-202ENST00000568095 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.96
LINC01541-202ENST00000568095 PCLOQ9Y6V0 5065 aa2.83□□□□□ -1.96
LINC01541-202ENST00000568095 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
LINC01541-202ENST00000568095 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
LINC01541-202ENST00000568095 LPAP08519 4548 aa2.82□□□□□ -1.96
LINC01541-202ENST00000568095 LRP2P98164 4655 aa2.77□□□□□ -1.97
LINC01541-202ENST00000568095 C10orf95Q9H7T3 257 aa2.76□□□□□ -1.97
LINC01541-202ENST00000568095 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
LINC01541-202ENST00000568095 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
LINC01541-202ENST00000568095 HERC1Q15751 4861 aa2.75□□□□□ -1.97
LINC01541-202ENST00000568095 S4R3F8 94 aa2.75□□□□□ -1.97
LINC01541-202ENST00000568095 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
LINC01541-202ENST00000568095 A0A0D9SG42 100 aa2.72□□□□□ -1.97
LINC01541-202ENST00000568095 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
LINC01541-202ENST00000568095 DMBT1Q9UGM3 2413 aaPredicted RBP2.67□□□□□ -1.98
LINC01541-202ENST00000568095 FLGP20930 4061 aaPredicted RBP2.67□□□□□ -1.98
LINC01541-202ENST00000568095 M0QZ58 72 aa2.64□□□□□ -1.99
LINC01541-202ENST00000568095 KRTAP19-2Q3LHN2 52 aa2.6□□□□□ -1.99
LINC01541-202ENST00000568095 MUC2Q02817 5179 aa2.6□□□□□ -1.99
LINC01541-202ENST00000568095 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
LINC01541-202ENST00000568095 PLAC4Q8WY50 150 aa2.59□□□□□ -1.99
LINC01541-202ENST00000568095 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
LINC01541-202ENST00000568095 R4GN34 69 aa2.58□□□□□ -2
LINC01541-202ENST00000568095 RNF213Q63HN8 5207 aa2.56□□□□□ -2
LINC01541-202ENST00000568095 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
LINC01541-202ENST00000568095 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
LINC01541-202ENST00000568095 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
LINC01541-202ENST00000568095 FAT4Q6V0I7 4981 aa2.49□□□□□ -2.01
LINC01541-202ENST00000568095 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
LINC01541-202ENST00000568095 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
LINC01541-202ENST00000568095 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
LINC01541-202ENST00000568095 MT1HP80294 61 aa2.4□□□□□ -2.03
LINC01541-202ENST00000568095 MT3P25713 68 aa2.39□□□□□ -2.03
LINC01541-202ENST00000568095 TNP1P09430 55 aa2.33□□□□□ -2.04
LINC01541-202ENST00000568095 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
LINC01541-202ENST00000568095 MT2AP02795 61 aa2.3□□□□□ -2.04
LINC01541-202ENST00000568095 INE1O15225 51 aa2.29□□□□□ -2.04
LINC01541-202ENST00000568095 MT1FP04733 61 aa2.29□□□□□ -2.04
LINC01541-202ENST00000568095 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
LINC01541-202ENST00000568095 SPRR2GQ9BYE4 73 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms