RNA–Protein interactions for RNA: ENST00000567890.1

NR4A1-222, Transcript of nuclear receptor subfamily 4 group A member 1, human

TSL 5

Gene NR4A1, Length 612 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR4A1-222	ENST00000567890	C1orf64	Q8NEQ6	169 aa		5.61	□□□□□ -1.51
NR4A1-222	ENST00000567890	ETDB	Q3ZM63	59 aa		5.56	□□□□□ -1.52
NR4A1-222	ENST00000567890	SYNE2	Q8WXH0	6885 aa	Known RBP	5.55	□□□□□ -1.52
NR4A1-222	ENST00000567890	ACYP1	P07311	99 aa		5.55	□□□□□ -1.52
NR4A1-222	ENST00000567890	LCA10	Q71F78	164 aa		5.55	□□□□□ -1.52
NR4A1-222	ENST00000567890	LOC101927531	A0A1B0GV80	90 aa		5.53	□□□□□ -1.52
NR4A1-222	ENST00000567890	KRTAP23-1	A1A580	65 aa		5.53	□□□□□ -1.52
NR4A1-222	ENST00000567890	CYP4F30P	Q9H0H9	118 aa		5.53	□□□□□ -1.52
NR4A1-222	ENST00000567890	TRAV22	A0A0B4J277	110 aa		5.52	□□□□□ -1.53
NR4A1-222	ENST00000567890	KRTAP6-3	Q3LI67	103 aa		5.52	□□□□□ -1.53
NR4A1-222	ENST00000567890	ATP5EP2	Q5VTU8	51 aa		5.52	□□□□□ -1.53
NR4A1-222	ENST00000567890	SPRR2G	Q9BYE4	73 aa		5.52	□□□□□ -1.53
NR4A1-222	ENST00000567890		Q5VV11	94 aa		5.51	□□□□□ -1.53
NR4A1-222	ENST00000567890	FAM240A	A0A1B0GVK7	77 aa		5.5	□□□□□ -1.53
NR4A1-222	ENST00000567890	KLKP1	Q107X0	134 aa		5.49	□□□□□ -1.53
NR4A1-222	ENST00000567890	CRIPT	Q9P021	101 aa		5.49	□□□□□ -1.53
NR4A1-222	ENST00000567890	ATOX1	O00244	68 aa		5.48	□□□□□ -1.53
NR4A1-222	ENST00000567890	KRTAP19-8	Q3LI54	63 aa		5.48	□□□□□ -1.53
NR4A1-222	ENST00000567890		A6NN06	94 aa		5.47	□□□□□ -1.53
NR4A1-222	ENST00000567890	UQCRQ	O14949	82 aa		5.46	□□□□□ -1.54
NR4A1-222	ENST00000567890	PCP4L1	A6NKN8	68 aa		5.45	□□□□□ -1.54
NR4A1-222	ENST00000567890	MT1B	P07438	61 aa		5.45	□□□□□ -1.54
NR4A1-222	ENST00000567890	IMUP	Q9GZP8	106 aa		5.44	□□□□□ -1.54
NR4A1-222	ENST00000567890		A8MUN3	132 aa		5.41	□□□□□ -1.54
NR4A1-222	ENST00000567890	NDUFC1	O43677	76 aa		5.41	□□□□□ -1.54
NR4A1-222	ENST00000567890	HIST1H4A	P62805	103 aa	Known RBP	5.41	□□□□□ -1.54
NR4A1-222	ENST00000567890		H0YAA0	97 aa		5.4	□□□□□ -1.54
NR4A1-222	ENST00000567890		A0A087WVE0	104 aa		5.39	□□□□□ -1.55
NR4A1-222	ENST00000567890		H0Y9P7	68 aa		5.38	□□□□□ -1.55
NR4A1-222	ENST00000567890	KRTAP10-5	P60370	271 aa		5.38	□□□□□ -1.55
NR4A1-222	ENST00000567890	LINC00643	Q86TS7	51 aa		5.37	□□□□□ -1.55
NR4A1-222	ENST00000567890	MP68	P56378	58 aa		5.33	□□□□□ -1.56
NR4A1-222	ENST00000567890	MUC12	Q9UKN1	5478 aa		5.3	□□□□□ -1.56
NR4A1-222	ENST00000567890	KRTAP15-1	Q3LI76	137 aa		5.3	□□□□□ -1.56
NR4A1-222	ENST00000567890	LINC00208	Q96KT6	92 aa		5.29	□□□□□ -1.56
NR4A1-222	ENST00000567890		H3BPC8	53 aa		5.27	□□□□□ -1.57
NR4A1-222	ENST00000567890	OCR1	Q9BZK8	76 aa		5.26	□□□□□ -1.57
NR4A1-222	ENST00000567890	ADM2	Q7Z4H4	148 aa		5.25	□□□□□ -1.57
NR4A1-222	ENST00000567890	C20orf197	Q8N268	126 aa		5.25	□□□□□ -1.57
NR4A1-222	ENST00000567890	PRO2289	Q9P1D8	64 aa		5.25	□□□□□ -1.57
NR4A1-222	ENST00000567890	NEB	P20929	6669 aa		5.25	□□□□□ -1.57
NR4A1-222	ENST00000567890	KRTAP5-9	P26371	169 aa		5.24	□□□□□ -1.57
NR4A1-222	ENST00000567890		J3QR89	54 aa		5.23	□□□□□ -1.57
NR4A1-222	ENST00000567890	PLAC4	Q8WY50	150 aa		5.19	□□□□□ -1.58
NR4A1-222	ENST00000567890		R4GN34	69 aa		5.19	□□□□□ -1.58
NR4A1-222	ENST00000567890	SCGB1A1	P11684	91 aa		5.18	□□□□□ -1.58
NR4A1-222	ENST00000567890		A0A1B0GV90	55 aa		5.17	□□□□□ -1.58
NR4A1-222	ENST00000567890	DMAC1	Q96GE9	116 aa		5.17	□□□□□ -1.58
NR4A1-222	ENST00000567890	KMT2D	O14686	5537 aa		5.16	□□□□□ -1.58
NR4A1-222	ENST00000567890	KRTAP20-1	Q3LI63	56 aa		5.15	□□□□□ -1.59
NR4A1-222	ENST00000567890	MDN1	Q9NU22	5596 aa		5.15	□□□□□ -1.59
NR4A1-222	ENST00000567890	TRAV7	A0A075B6U4	112 aa		5.11	□□□□□ -1.59
NR4A1-222	ENST00000567890		M0QZ58	72 aa		5.1	□□□□□ -1.59
NR4A1-222	ENST00000567890		P0C880	135 aa		5.1	□□□□□ -1.59
NR4A1-222	ENST00000567890	MT1X	P80297	61 aa		5.1	□□□□□ -1.59
NR4A1-222	ENST00000567890	KRTAP5-3	Q6L8H2	238 aa		5.08	□□□□□ -1.6
NR4A1-222	ENST00000567890	SPTSSB	Q8NFR3	76 aa		5.08	□□□□□ -1.6
NR4A1-222	ENST00000567890	KRTAP12-2	P59991	146 aa		5.07	□□□□□ -1.6
NR4A1-222	ENST00000567890	SMIM20	Q8N5G0	67 aa		5.07	□□□□□ -1.6
NR4A1-222	ENST00000567890	SPRR2F	Q96RM1	72 aa		5.07	□□□□□ -1.6
NR4A1-222	ENST00000567890	ACYP2	P14621	99 aa		5.06	□□□□□ -1.6
NR4A1-222	ENST00000567890	LINC01554	Q52M75	96 aa		5.04	□□□□□ -1.6
NR4A1-222	ENST00000567890	KRTAP8-1	Q8IUC2	63 aa		5.02	□□□□□ -1.61
NR4A1-222	ENST00000567890	SPRR2E	P22531	72 aa		5.01	□□□□□ -1.61
NR4A1-222	ENST00000567890	SPRR2B	P35325	72 aa		5.01	□□□□□ -1.61
NR4A1-222	ENST00000567890	SPRR2A	P35326	72 aa		5.01	□□□□□ -1.61
NR4A1-222	ENST00000567890	KRTAP2-3	P0C7H8	128 aa		5	□□□□□ -1.61
NR4A1-222	ENST00000567890	KRTAP2-4	Q9BYR9	128 aa		5	□□□□□ -1.61
NR4A1-222	ENST00000567890		K7ERU9	68 aa		4.98	□□□□□ -1.61
NR4A1-222	ENST00000567890	CHKB-CPT1B	H3BT56	60 aa		4.96	□□□□□ -1.62
NR4A1-222	ENST00000567890	MT-ATP8	P03928	68 aa		4.95	□□□□□ -1.62
NR4A1-222	ENST00000567890	LCE1A	Q5T7P2	110 aa		4.9	□□□□□ -1.63
NR4A1-222	ENST00000567890	SPANXA2-OT1	Q8N9U9	137 aa		4.89	□□□□□ -1.63
NR4A1-222	ENST00000567890	KRTAP10-7	P60409	375 aa	Predicted RBP	4.88	□□□□□ -1.63
NR4A1-222	ENST00000567890	KRTAP10-12	P60413	245 aa		4.87	□□□□□ -1.63
NR4A1-222	ENST00000567890	SPRR2D	P22532	72 aa		4.85	□□□□□ -1.63
NR4A1-222	ENST00000567890	KRTAP2-2	Q9BYT5	123 aa		4.84	□□□□□ -1.63
NR4A1-222	ENST00000567890	KRTAP2-1	Q9BYU5	128 aa		4.84	□□□□□ -1.63
NR4A1-222	ENST00000567890	SNURF	Q9Y675	71 aa		4.84	□□□□□ -1.63
NR4A1-222	ENST00000567890	SERP2	Q8N6R1	65 aa		4.8	□□□□□ -1.64
NR4A1-222	ENST00000567890	CAMK2N1	Q7Z7J9	78 aa		4.75	□□□□□ -1.65
NR4A1-222	ENST00000567890	SEC61G	P60059	68 aa		4.74	□□□□□ -1.65
NR4A1-222	ENST00000567890	KRTAP13-4	Q3LI77	160 aa		4.72	□□□□□ -1.65
NR4A1-222	ENST00000567890	SERP1	Q9Y6X1	66 aa		4.71	□□□□□ -1.66
NR4A1-222	ENST00000567890	COA5	Q86WW8	74 aa		4.68	□□□□□ -1.66
NR4A1-222	ENST00000567890		A0A0D9SG42	100 aa		4.62	□□□□□ -1.67
NR4A1-222	ENST00000567890	COX7C	P15954	63 aa		4.61	□□□□□ -1.67
NR4A1-222	ENST00000567890		A0A1B0GU33	70 aa		4.6	□□□□□ -1.67
NR4A1-222	ENST00000567890	SPATA8	Q6RVD6	105 aa		4.57	□□□□□ -1.68
NR4A1-222	ENST00000567890	SPINT4	Q6UDR6	99 aa		4.56	□□□□□ -1.68
NR4A1-222	ENST00000567890	KRTAP19-7	Q3SYF9	63 aa		4.55	□□□□□ -1.68
NR4A1-222	ENST00000567890		H7BZZ5	65 aa		4.54	□□□□□ -1.68
NR4A1-222	ENST00000567890	MT1E	P04732	61 aa		4.53	□□□□□ -1.68
NR4A1-222	ENST00000567890	KRTAP19-3	Q7Z4W3	81 aa		4.53	□□□□□ -1.68
NR4A1-222	ENST00000567890	ANAPC13	Q9BS18	74 aa		4.53	□□□□□ -1.68
NR4A1-222	ENST00000567890	SMIM26	A0A096LP01	95 aa		4.52	□□□□□ -1.69
NR4A1-222	ENST00000567890	KRTAP12-1	P59990	96 aa		4.5	□□□□□ -1.69
NR4A1-222	ENST00000567890		A0A1B0GU69	56 aa		4.49	□□□□□ -1.69
NR4A1-222	ENST00000567890	PP632	Q6XCG6	107 aa		4.47	□□□□□ -1.69
NR4A1-222	ENST00000567890	GPR98	Q8WXG9	6306 aa		4.46	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms