RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
SIN3A-208ENST00000567289 DNAH2Q9P225 4427 aa5.84□□□□□ -1.47
SIN3A-208ENST00000567289 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
SIN3A-208ENST00000567289 DNAH6Q9C0G6 4158 aa5.82□□□□□ -1.48
SIN3A-208ENST00000567289 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
SIN3A-208ENST00000567289 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
SIN3A-208ENST00000567289 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
SIN3A-208ENST00000567289 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
SIN3A-208ENST00000567289 TNP1P09430 55 aa5.77□□□□□ -1.49
SIN3A-208ENST00000567289 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
SIN3A-208ENST00000567289 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
SIN3A-208ENST00000567289 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
SIN3A-208ENST00000567289 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
SIN3A-208ENST00000567289 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
SIN3A-208ENST00000567289 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
SIN3A-208ENST00000567289 DNHD1Q96M86 4753 aa5.63□□□□□ -1.51
SIN3A-208ENST00000567289 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
SIN3A-208ENST00000567289 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
SIN3A-208ENST00000567289 FAT1Q14517 4588 aa5.59□□□□□ -1.51
SIN3A-208ENST00000567289 MYCBP2O75592 4640 aa5.55□□□□□ -1.52
SIN3A-208ENST00000567289 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
SIN3A-208ENST00000567289 FAT2Q9NYQ8 4349 aa5.5□□□□□ -1.53
SIN3A-208ENST00000567289 PKD1P98161 4303 aa5.48□□□□□ -1.53
SIN3A-208ENST00000567289 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
SIN3A-208ENST00000567289 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
SIN3A-208ENST00000567289 SACSQ9NZJ4 4579 aa5.43□□□□□ -1.54
SIN3A-208ENST00000567289 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
SIN3A-208ENST00000567289 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-208ENST00000567289 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
SIN3A-208ENST00000567289 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
SIN3A-208ENST00000567289 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
SIN3A-208ENST00000567289 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
SIN3A-208ENST00000567289 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
SIN3A-208ENST00000567289 HSPG2P98160 4391 aa5.23□□□□□ -1.57
SIN3A-208ENST00000567289 RYR1P21817 5038 aa5.2□□□□□ -1.58
SIN3A-208ENST00000567289 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
SIN3A-208ENST00000567289 KIAA1109Q2LD37 5005 aa5.14□□□□□ -1.59
SIN3A-208ENST00000567289 LRP2P98164 4655 aa5.12□□□□□ -1.59
SIN3A-208ENST00000567289 KMT2CQ8NEZ4 4911 aaKnown RBP5.11□□□□□ -1.59
SIN3A-208ENST00000567289 RYR2Q92736 4967 aa5.08□□□□□ -1.6
SIN3A-208ENST00000567289 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
SIN3A-208ENST00000567289 TNXBP22105 4242 aa5.05□□□□□ -1.6
SIN3A-208ENST00000567289 LPAP08519 4548 aa5.04□□□□□ -1.6
SIN3A-208ENST00000567289 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
SIN3A-208ENST00000567289 RYR3Q15413 4870 aa5.02□□□□□ -1.61
SIN3A-208ENST00000567289 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
SIN3A-208ENST00000567289 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
SIN3A-208ENST00000567289 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
SIN3A-208ENST00000567289 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
SIN3A-208ENST00000567289 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
SIN3A-208ENST00000567289 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
SIN3A-208ENST00000567289 INE1O15225 51 aa4.83□□□□□ -1.64
SIN3A-208ENST00000567289 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
SIN3A-208ENST00000567289 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SIN3A-208ENST00000567289 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
SIN3A-208ENST00000567289 MUC2Q02817 5179 aa4.7□□□□□ -1.66
SIN3A-208ENST00000567289 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
SIN3A-208ENST00000567289 HERC2O95714 4834 aa4.61□□□□□ -1.67
SIN3A-208ENST00000567289 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
SIN3A-208ENST00000567289 MT2AP02795 61 aa4.58□□□□□ -1.68
SIN3A-208ENST00000567289 MT1FP04733 61 aa4.58□□□□□ -1.68
SIN3A-208ENST00000567289 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
SIN3A-208ENST00000567289 MT1HP80294 61 aa4.55□□□□□ -1.68
SIN3A-208ENST00000567289 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
SIN3A-208ENST00000567289 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SIN3A-208ENST00000567289 PCLOQ9Y6V0 5065 aa4.48□□□□□ -1.69
SIN3A-208ENST00000567289 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
SIN3A-208ENST00000567289 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
SIN3A-208ENST00000567289 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
SIN3A-208ENST00000567289 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SIN3A-208ENST00000567289 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
SIN3A-208ENST00000567289 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
SIN3A-208ENST00000567289 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SIN3A-208ENST00000567289 LCE2BO14633 110 aa4.39□□□□□ -1.71
SIN3A-208ENST00000567289 BIRC6Q9NR09 4857 aa4.39□□□□□ -1.71
SIN3A-208ENST00000567289 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
SIN3A-208ENST00000567289 HERC1Q15751 4861 aa4.38□□□□□ -1.71
SIN3A-208ENST00000567289 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
SIN3A-208ENST00000567289 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
SIN3A-208ENST00000567289 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SIN3A-208ENST00000567289 LCE2CQ5TA81 110 aa4.34□□□□□ -1.71
SIN3A-208ENST00000567289 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
SIN3A-208ENST00000567289 MT1XP80297 61 aa4.33□□□□□ -1.72
SIN3A-208ENST00000567289 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
SIN3A-208ENST00000567289 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
SIN3A-208ENST00000567289 MT1BP07438 61 aa4.27□□□□□ -1.73
SIN3A-208ENST00000567289 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
SIN3A-208ENST00000567289 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
SIN3A-208ENST00000567289 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
SIN3A-208ENST00000567289 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
SIN3A-208ENST00000567289 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SIN3A-208ENST00000567289 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
SIN3A-208ENST00000567289 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
SIN3A-208ENST00000567289 MT1GP13640 62 aa4.04□□□□□ -1.76
SIN3A-208ENST00000567289 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
SIN3A-208ENST00000567289 KMT2DO14686 5537 aa4.01□□□□□ -1.77
SIN3A-208ENST00000567289 LCE3BQ5TA77 95 aa4□□□□□ -1.77
SIN3A-208ENST00000567289 USH2AO75445 5202 aa4□□□□□ -1.77
SIN3A-208ENST00000567289 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
SIN3A-208ENST00000567289 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms