RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 LRP1Q07954 4544 aaKnown RBP3.56□□□□□ -1.84
GINS3-206ENST00000567143 SPATA8Q6RVD6 105 aa3.55□□□□□ -1.84
GINS3-206ENST00000567143 Q5VSD8 79 aa3.53□□□□□ -1.84
GINS3-206ENST00000567143 KRTAP4-5Q9BYR2 181 aa3.52□□□□□ -1.85
GINS3-206ENST00000567143 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
GINS3-206ENST00000567143 LINC01554Q52M75 96 aa3.51□□□□□ -1.85
GINS3-206ENST00000567143 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
GINS3-206ENST00000567143 H0YAA0 97 aa3.49□□□□□ -1.85
GINS3-206ENST00000567143 A0A0D9SG42 100 aa3.48□□□□□ -1.85
GINS3-206ENST00000567143 A0A1B0GU33 70 aa3.48□□□□□ -1.85
GINS3-206ENST00000567143 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
GINS3-206ENST00000567143 KRTAP3-1Q9BYR8 98 aa3.48□□□□□ -1.85
GINS3-206ENST00000567143 TNXBP22105 4242 aa3.47□□□□□ -1.85
GINS3-206ENST00000567143 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
GINS3-206ENST00000567143 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
GINS3-206ENST00000567143 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.86
GINS3-206ENST00000567143 LPAP08519 4548 aa3.4□□□□□ -1.86
GINS3-206ENST00000567143 A8MUU9 505 aa3.4□□□□□ -1.87
GINS3-206ENST00000567143 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
GINS3-206ENST00000567143 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
GINS3-206ENST00000567143 H3BS24 57 aa3.38□□□□□ -1.87
GINS3-206ENST00000567143 LRP2P98164 4655 aa3.37□□□□□ -1.87
GINS3-206ENST00000567143 K7ERS5 55 aa3.37□□□□□ -1.87
GINS3-206ENST00000567143 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
GINS3-206ENST00000567143 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
GINS3-206ENST00000567143 KRTAP13-4Q3LI77 160 aa3.35□□□□□ -1.87
GINS3-206ENST00000567143 P0C880 135 aa3.33□□□□□ -1.88
GINS3-206ENST00000567143 HMCN2Q8NDA2 5059 aa3.33□□□□□ -1.88
GINS3-206ENST00000567143 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
GINS3-206ENST00000567143 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
GINS3-206ENST00000567143 J3QL48 77 aa3.3□□□□□ -1.88
GINS3-206ENST00000567143 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
GINS3-206ENST00000567143 ROMO1P60602 79 aa3.3□□□□□ -1.88
GINS3-206ENST00000567143 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
GINS3-206ENST00000567143 S4R3F8 94 aa3.3□□□□□ -1.88
GINS3-206ENST00000567143 XP32Q5T750 250 aa3.28□□□□□ -1.88
GINS3-206ENST00000567143 MUC2Q02817 5179 aa3.27□□□□□ -1.89
GINS3-206ENST00000567143 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
GINS3-206ENST00000567143 HERC1Q15751 4861 aa3.25□□□□□ -1.89
GINS3-206ENST00000567143 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
GINS3-206ENST00000567143 LCE2BO14633 110 aa3.21□□□□□ -1.9
GINS3-206ENST00000567143 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
GINS3-206ENST00000567143 M0QZ58 72 aa3.16□□□□□ -1.9
GINS3-206ENST00000567143 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
GINS3-206ENST00000567143 R4GN34 69 aa3.13□□□□□ -1.91
GINS3-206ENST00000567143 LORP23490 312 aaPredicted RBP3.1□□□□□ -1.91
GINS3-206ENST00000567143 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
GINS3-206ENST00000567143 FAT4Q6V0I7 4981 aa3.09□□□□□ -1.91
GINS3-206ENST00000567143 SEC61BP60468 96 aaKnown RBP3.07□□□□□ -1.92
GINS3-206ENST00000567143 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
GINS3-206ENST00000567143 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
GINS3-206ENST00000567143 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
GINS3-206ENST00000567143 UBR4Q5T4S7 5183 aa3.06□□□□□ -1.92
GINS3-206ENST00000567143 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
GINS3-206ENST00000567143 CAMK2N1Q7Z7J9 78 aa3.02□□□□□ -1.93
GINS3-206ENST00000567143 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
GINS3-206ENST00000567143 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
GINS3-206ENST00000567143 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
GINS3-206ENST00000567143 FLGP20930 4061 aaPredicted RBP2.94□□□□□ -1.94
GINS3-206ENST00000567143 MT1HP80294 61 aa2.92□□□□□ -1.94
GINS3-206ENST00000567143 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
GINS3-206ENST00000567143 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
GINS3-206ENST00000567143 M0R2T5 61 aa2.86□□□□□ -1.95
GINS3-206ENST00000567143 KRTAP9-8Q9BYQ0 159 aa2.82□□□□□ -1.96
GINS3-206ENST00000567143 TNP1P09430 55 aa2.81□□□□□ -1.96
GINS3-206ENST00000567143 USH2AO75445 5202 aa2.77□□□□□ -1.97
GINS3-206ENST00000567143 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
GINS3-206ENST00000567143 MT2AP02795 61 aa2.74□□□□□ -1.97
GINS3-206ENST00000567143 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
GINS3-206ENST00000567143 KMT2DO14686 5537 aa2.73□□□□□ -1.97
GINS3-206ENST00000567143 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
GINS3-206ENST00000567143 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
GINS3-206ENST00000567143 MT1FP04733 61 aa2.7□□□□□ -1.98
GINS3-206ENST00000567143 LCE3AQ5TA76 89 aa2.7□□□□□ -1.98
GINS3-206ENST00000567143 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
GINS3-206ENST00000567143 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
GINS3-206ENST00000567143 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
GINS3-206ENST00000567143 KRTAP4-6Q9BYQ5 205 aa2.69□□□□□ -1.98
GINS3-206ENST00000567143 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
GINS3-206ENST00000567143 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
GINS3-206ENST00000567143 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
GINS3-206ENST00000567143 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
GINS3-206ENST00000567143 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
GINS3-206ENST00000567143 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
GINS3-206ENST00000567143 KRTAP23-1A1A580 65 aa2.55□□□□□ -2
GINS3-206ENST00000567143 MT1BP07438 61 aa2.55□□□□□ -2
GINS3-206ENST00000567143 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
GINS3-206ENST00000567143 SSPOA2VEC9 5147 aa2.54□□□□□ -2
GINS3-206ENST00000567143 KRTAP12-3P60328 96 aa2.54□□□□□ -2
GINS3-206ENST00000567143 KRTAP10-12P60413 245 aa2.54□□□□□ -2
GINS3-206ENST00000567143 KRTAP10-5P60370 271 aa2.53□□□□□ -2
GINS3-206ENST00000567143 MT1XP80297 61 aa2.53□□□□□ -2
GINS3-206ENST00000567143 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
GINS3-206ENST00000567143 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
GINS3-206ENST00000567143 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
GINS3-206ENST00000567143 KRTAP4-8A0A0G2JLE6 195 aa2.46□□□□□ -2.02
GINS3-206ENST00000567143 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
GINS3-206ENST00000567143 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
GINS3-206ENST00000567143 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
GINS3-206ENST00000567143 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms