RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 A0A087WVE0 104 aa6.68□□□□□ -1.34
SMPD3-208ENST00000566723 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
SMPD3-208ENST00000566723 IMUPQ9GZP8 106 aa6.62□□□□□ -1.35
SMPD3-208ENST00000566723 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
SMPD3-208ENST00000566723 KMT2DO14686 5537 aa6.6□□□□□ -1.35
SMPD3-208ENST00000566723 ACYP1P07311 99 aa6.59□□□□□ -1.35
SMPD3-208ENST00000566723 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
SMPD3-208ENST00000566723 ATP5EP2Q5VTU8 51 aa6.59□□□□□ -1.35
SMPD3-208ENST00000566723 H0YAA0 97 aa6.58□□□□□ -1.36
SMPD3-208ENST00000566723 ATOX1O00244 68 aa6.58□□□□□ -1.36
SMPD3-208ENST00000566723 UQCRQO14949 82 aa6.58□□□□□ -1.36
SMPD3-208ENST00000566723 NDUFC1O43677 76 aa6.58□□□□□ -1.36
SMPD3-208ENST00000566723 H0Y9P7 68 aa6.57□□□□□ -1.36
SMPD3-208ENST00000566723 FAM240AA0A1B0GVK7 77 aa6.56□□□□□ -1.36
SMPD3-208ENST00000566723 HIST1H4AP62805 103 aaKnown RBP6.55□□□□□ -1.36
SMPD3-208ENST00000566723 PCP4L1A6NKN8 68 aa6.54□□□□□ -1.36
SMPD3-208ENST00000566723 H3BS24 57 aa6.52□□□□□ -1.37
SMPD3-208ENST00000566723 KRTAP20-1Q3LI63 56 aa6.52□□□□□ -1.37
SMPD3-208ENST00000566723 A8MUN3 132 aa6.51□□□□□ -1.37
SMPD3-208ENST00000566723 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
SMPD3-208ENST00000566723 LINC00208Q96KT6 92 aa6.44□□□□□ -1.38
SMPD3-208ENST00000566723 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
SMPD3-208ENST00000566723 LINC00643Q86TS7 51 aa6.41□□□□□ -1.38
SMPD3-208ENST00000566723 MT1XP80297 61 aa6.4□□□□□ -1.38
SMPD3-208ENST00000566723 MP68P56378 58 aa6.39□□□□□ -1.39
SMPD3-208ENST00000566723 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
SMPD3-208ENST00000566723 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
SMPD3-208ENST00000566723 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
SMPD3-208ENST00000566723 R4GN34 69 aa6.35□□□□□ -1.39
SMPD3-208ENST00000566723 C20orf197Q8N268 126 aa6.33□□□□□ -1.4
SMPD3-208ENST00000566723 P0C880 135 aa6.32□□□□□ -1.4
SMPD3-208ENST00000566723 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
SMPD3-208ENST00000566723 SPRR2EP22531 72 aa6.3□□□□□ -1.4
SMPD3-208ENST00000566723 SPRR2BP35325 72 aa6.3□□□□□ -1.4
SMPD3-208ENST00000566723 SPRR2AP35326 72 aa6.3□□□□□ -1.4
SMPD3-208ENST00000566723 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
SMPD3-208ENST00000566723 M0QZ58 72 aa6.29□□□□□ -1.4
SMPD3-208ENST00000566723 H3BPC8 53 aa6.28□□□□□ -1.4
SMPD3-208ENST00000566723 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
SMPD3-208ENST00000566723 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
SMPD3-208ENST00000566723 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
SMPD3-208ENST00000566723 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
SMPD3-208ENST00000566723 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
SMPD3-208ENST00000566723 A0A1B0GV90 55 aa6.17□□□□□ -1.42
SMPD3-208ENST00000566723 SCGB1A1P11684 91 aa6.17□□□□□ -1.42
SMPD3-208ENST00000566723 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
SMPD3-208ENST00000566723 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
SMPD3-208ENST00000566723 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
SMPD3-208ENST00000566723 J3QR89 54 aa6.14□□□□□ -1.43
SMPD3-208ENST00000566723 SPRR2DP22532 72 aa6.09□□□□□ -1.43
SMPD3-208ENST00000566723 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
SMPD3-208ENST00000566723 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.43
SMPD3-208ENST00000566723 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
SMPD3-208ENST00000566723 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
SMPD3-208ENST00000566723 ACYP2P14621 99 aa6.07□□□□□ -1.44
SMPD3-208ENST00000566723 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
SMPD3-208ENST00000566723 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
SMPD3-208ENST00000566723 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
SMPD3-208ENST00000566723 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
SMPD3-208ENST00000566723 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SMPD3-208ENST00000566723 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
SMPD3-208ENST00000566723 SNURFQ9Y675 71 aa5.87□□□□□ -1.47
SMPD3-208ENST00000566723 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
SMPD3-208ENST00000566723 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
SMPD3-208ENST00000566723 K7ERU9 68 aa5.82□□□□□ -1.48
SMPD3-208ENST00000566723 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
SMPD3-208ENST00000566723 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
SMPD3-208ENST00000566723 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
SMPD3-208ENST00000566723 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
SMPD3-208ENST00000566723 MT1EP04732 61 aa5.68□□□□□ -1.5
SMPD3-208ENST00000566723 COA5Q86WW8 74 aa5.68□□□□□ -1.5
SMPD3-208ENST00000566723 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
SMPD3-208ENST00000566723 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
SMPD3-208ENST00000566723 A0A0D9SG42 100 aa5.64□□□□□ -1.51
SMPD3-208ENST00000566723 SEC61GP60059 68 aa5.63□□□□□ -1.51
SMPD3-208ENST00000566723 SERP1Q9Y6X1 66 aa5.63□□□□□ -1.51
SMPD3-208ENST00000566723 SPATA8Q6RVD6 105 aa5.59□□□□□ -1.51
SMPD3-208ENST00000566723 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
SMPD3-208ENST00000566723 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
SMPD3-208ENST00000566723 A0A1B0GU33 70 aa5.55□□□□□ -1.52
SMPD3-208ENST00000566723 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SMPD3-208ENST00000566723 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
SMPD3-208ENST00000566723 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
SMPD3-208ENST00000566723 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
SMPD3-208ENST00000566723 MT1GP13640 62 aa5.5□□□□□ -1.53
SMPD3-208ENST00000566723 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
SMPD3-208ENST00000566723 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
SMPD3-208ENST00000566723 COX7CP15954 63 aa5.48□□□□□ -1.53
SMPD3-208ENST00000566723 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
SMPD3-208ENST00000566723 H7BZZ5 65 aa5.45□□□□□ -1.54
SMPD3-208ENST00000566723 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
SMPD3-208ENST00000566723 MT1MQ8N339 61 aa5.42□□□□□ -1.54
SMPD3-208ENST00000566723 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
SMPD3-208ENST00000566723 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
SMPD3-208ENST00000566723 MT1LQ93083 61 aa5.4□□□□□ -1.54
SMPD3-208ENST00000566723 A0A1B0GU69 56 aa5.39□□□□□ -1.55
SMPD3-208ENST00000566723 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
SMPD3-208ENST00000566723 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
SMPD3-208ENST00000566723 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
SMPD3-208ENST00000566723 A8MU10 97 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms