RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 CSMD2Q7Z408 3487 aa1.84□□□□□ -2.11
CDH1-207ENST00000564745 DEFB4AO15263 64 aa1.84□□□□□ -2.11
CDH1-207ENST00000564745 PRLHP81277 87 aa1.84□□□□□ -2.11
CDH1-207ENST00000564745 DEFB135Q30KP9 77 aa1.84□□□□□ -2.11
CDH1-207ENST00000564745 HERC2O95714 4834 aa1.84□□□□□ -2.12
CDH1-207ENST00000564745 BSNQ9UPA5 3926 aa1.84□□□□□ -2.12
CDH1-207ENST00000564745 LY6G6CO95867 125 aa1.83□□□□□ -2.12
CDH1-207ENST00000564745 VWFP04275 2813 aa1.83□□□□□ -2.12
CDH1-207ENST00000564745 AKAP6Q13023 2319 aa1.83□□□□□ -2.12
CDH1-207ENST00000564745 ATMQ13315 3056 aa1.82□□□□□ -2.12
CDH1-207ENST00000564745 ALMS1Q8TCU4 4167 aa1.82□□□□□ -2.12
CDH1-207ENST00000564745 SPACA4Q8TDM5 124 aa1.82□□□□□ -2.12
CDH1-207ENST00000564745 AKAP9Q99996 3911 aa1.82□□□□□ -2.12
CDH1-207ENST00000564745 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
CDH1-207ENST00000564745 NUPR2A6NF83 97 aa1.81□□□□□ -2.12
CDH1-207ENST00000564745 K7EIL1 84 aa1.81□□□□□ -2.12
CDH1-207ENST00000564745 PDZD2O15018 2839 aa1.81□□□□□ -2.12
CDH1-207ENST00000564745 A0A096LNI7 61 aa1.8□□□□□ -2.12
CDH1-207ENST00000564745 CRYBG3Q68DQ2 2970 aa1.8□□□□□ -2.12
CDH1-207ENST00000564745 H0YAA0 97 aa1.79□□□□□ -2.12
CDH1-207ENST00000564745 Q6ZSA8 131 aa1.79□□□□□ -2.12
CDH1-207ENST00000564745 NIPBLQ6KC79 2804 aaeCLIP1.79□□□□□ -2.12
CDH1-207ENST00000564745 CUBNO60494 3623 aa1.79□□□□□ -2.12
CDH1-207ENST00000564745 MUC2Q02817 5179 aa1.79□□□□□ -2.12
CDH1-207ENST00000564745 ACANP16112 2415 aa1.78□□□□□ -2.12
CDH1-207ENST00000564745 A0A087WTM6 91 aa1.78□□□□□ -2.12
CDH1-207ENST00000564745 DEFB113Q30KQ7 82 aa1.78□□□□□ -2.12
CDH1-207ENST00000564745 TENM1Q9UKZ4 2725 aa1.78□□□□□ -2.12
CDH1-207ENST00000564745 Q6ZRN7 208 aaPredicted RBP1.77□□□□□ -2.13
CDH1-207ENST00000564745 CELSR2Q9HCU4 2923 aa1.77□□□□□ -2.13
CDH1-207ENST00000564745 H1FX-AS1Q4G0G2 97 aa1.76□□□□□ -2.13
CDH1-207ENST00000564745 TGP01266 2768 aa1.76□□□□□ -2.13
CDH1-207ENST00000564745 VPS13CQ709C8 3753 aa1.75□□□□□ -2.13
CDH1-207ENST00000564745 DNAH1Q9P2D7 4330 aa1.75□□□□□ -2.13
CDH1-207ENST00000564745 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
CDH1-207ENST00000564745 MXRA5Q9NR99 2828 aa1.75□□□□□ -2.13
CDH1-207ENST00000564745 APCP25054 2843 aa1.74□□□□□ -2.13
CDH1-207ENST00000564745 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
CDH1-207ENST00000564745 SMR3AQ99954 134 aa1.74□□□□□ -2.13
CDH1-207ENST00000564745 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
CDH1-207ENST00000564745 SPINK6Q6UWN8 80 aa1.73□□□□□ -2.13
CDH1-207ENST00000564745 SONP18583 2426 aaKnown RBP1.73□□□□□ -2.13
CDH1-207ENST00000564745 ANK3Q12955 4377 aaKnown RBP1.73□□□□□ -2.13
CDH1-207ENST00000564745 TENM2Q9NT68 2774 aa1.72□□□□□ -2.13
CDH1-207ENST00000564745 ZANQ9Y493 2812 aa1.72□□□□□ -2.13
CDH1-207ENST00000564745 SPINK1P00995 79 aa1.71□□□□□ -2.14
CDH1-207ENST00000564745 RPL37P61927 97 aaKnown RBP1.71□□□□□ -2.14
CDH1-207ENST00000564745 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
CDH1-207ENST00000564745 HERC1Q15751 4861 aa1.71□□□□□ -2.14
CDH1-207ENST00000564745 NSD1Q96L73 2696 aaPredicted RBP1.7□□□□□ -2.14
CDH1-207ENST00000564745 NBDYA0A0U1RRE5 68 aa1.7□□□□□ -2.14
CDH1-207ENST00000564745 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CDH1-207ENST00000564745 ANK2Q01484 3957 aa1.69□□□□□ -2.14
CDH1-207ENST00000564745 MEGF8Q7Z7M0 2845 aa1.69□□□□□ -2.14
CDH1-207ENST00000564745 ZNF469Q96JG9 3925 aaPredicted RBP1.69□□□□□ -2.14
CDH1-207ENST00000564745 TENM3Q9P273 2699 aa1.67□□□□□ -2.14
CDH1-207ENST00000564745 SRRM2Q9UQ35 2752 aaKnown RBP1.67□□□□□ -2.14
CDH1-207ENST00000564745 PRKDCP78527 4128 aaKnown RBP1.66□□□□□ -2.14
CDH1-207ENST00000564745 DNAH8Q96JB1 4490 aa1.66□□□□□ -2.14
CDH1-207ENST00000564745 CRCT1Q9UGL9 99 aa1.65□□□□□ -2.15
CDH1-207ENST00000564745 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
CDH1-207ENST00000564745 UBE2DNLQ8IWF7 75 aa1.64□□□□□ -2.15
CDH1-207ENST00000564745 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
CDH1-207ENST00000564745 DNAH10Q8IVF4 4471 aa1.63□□□□□ -2.15
CDH1-207ENST00000564745 APLNQ9ULZ1 77 aa1.63□□□□□ -2.15
CDH1-207ENST00000564745 TRRAPQ9Y4A5 3859 aa1.63□□□□□ -2.15
CDH1-207ENST00000564745 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
CDH1-207ENST00000564745 RPS29P62273 56 aaKnown RBP1.62□□□□□ -2.15
CDH1-207ENST00000564745 S4R3F8 94 aa1.62□□□□□ -2.15
CDH1-207ENST00000564745 VPS13DQ5THJ4 4388 aa1.62□□□□□ -2.15
CDH1-207ENST00000564745 LYSTQ99698 3801 aa1.62□□□□□ -2.15
CDH1-207ENST00000564745 DNAH17Q9UFH2 4485 aa1.61□□□□□ -2.15
CDH1-207ENST00000564745 CSMD3Q7Z407 3707 aa1.6□□□□□ -2.15
CDH1-207ENST00000564745 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
CDH1-207ENST00000564745 A0A0D9SG42 100 aa1.6□□□□□ -2.15
CDH1-207ENST00000564745 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
CDH1-207ENST00000564745 DNAH9Q9NYC9 4486 aa1.6□□□□□ -2.15
CDH1-207ENST00000564745 FLG2Q5D862 2391 aaPredicted RBP1.59□□□□□ -2.15
CDH1-207ENST00000564745 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.16
CDH1-207ENST00000564745 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
CDH1-207ENST00000564745 DMBT1Q9UGM3 2413 aaPredicted RBP1.57□□□□□ -2.16
CDH1-207ENST00000564745 DNAH3Q8TD57 4116 aa1.57□□□□□ -2.16
CDH1-207ENST00000564745 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
CDH1-207ENST00000564745 SACSQ9NZJ4 4579 aa1.56□□□□□ -2.16
CDH1-207ENST00000564745 M0QZ58 72 aa1.56□□□□□ -2.16
CDH1-207ENST00000564745 HUWE1Q7Z6Z7 4374 aaKnown RBP1.55□□□□□ -2.16
CDH1-207ENST00000564745 COL7A1Q02388 2944 aa1.55□□□□□ -2.16
CDH1-207ENST00000564745 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
CDH1-207ENST00000564745 DNAH2Q9P225 4427 aa1.54□□□□□ -2.16
CDH1-207ENST00000564745 PLECQ15149 4684 aaKnown RBP1.54□□□□□ -2.16
CDH1-207ENST00000564745 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
CDH1-207ENST00000564745 NEBP20929 6669 aa1.53□□□□□ -2.16
CDH1-207ENST00000564745 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
CDH1-207ENST00000564745 HECTD4Q9Y4D8 3996 aa1.52□□□□□ -2.17
CDH1-207ENST00000564745 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
CDH1-207ENST00000564745 STAB2Q8WWQ8 2551 aa1.52□□□□□ -2.17
CDH1-207ENST00000564745 C9orf92A6NGG3 77 aa1.51□□□□□ -2.17
CDH1-207ENST00000564745 INE1O15225 51 aa1.5□□□□□ -2.17
CDH1-207ENST00000564745 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
CDH1-207ENST00000564745 CMYA5Q8N3K9 4069 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms