RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
CAPN3-212ENST00000564503 ANAPC11Q9NYG5 84 aa2.7□□□□□ -1.98
CAPN3-212ENST00000564503 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
CAPN3-212ENST00000564503 HYDINQ4G0P3 5121 aa2.69□□□□□ -1.98
CAPN3-212ENST00000564503 K7ERS5 55 aa2.69□□□□□ -1.98
CAPN3-212ENST00000564503 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
CAPN3-212ENST00000564503 ADM2Q7Z4H4 148 aa2.68□□□□□ -1.98
CAPN3-212ENST00000564503 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CAPN3-212ENST00000564503 PRKDCP78527 4128 aaKnown RBP2.67□□□□□ -1.98
CAPN3-212ENST00000564503 DNAH8Q96JB1 4490 aa2.67□□□□□ -1.98
CAPN3-212ENST00000564503 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
CAPN3-212ENST00000564503 DNAH17Q9UFH2 4485 aa2.66□□□□□ -1.98
CAPN3-212ENST00000564503 SRRM2Q9UQ35 2752 aaKnown RBP2.65□□□□□ -1.99
CAPN3-212ENST00000564503 CSAG1Q6PB30 78 aa2.64□□□□□ -1.99
CAPN3-212ENST00000564503 LY6G6CO95867 125 aa2.63□□□□□ -1.99
CAPN3-212ENST00000564503 RYR2Q92736 4967 aa2.62□□□□□ -1.99
CAPN3-212ENST00000564503 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
CAPN3-212ENST00000564503 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
CAPN3-212ENST00000564503 LYSTQ99698 3801 aa2.62□□□□□ -1.99
CAPN3-212ENST00000564503 VPS13DQ5THJ4 4388 aa2.62□□□□□ -1.99
CAPN3-212ENST00000564503 HERC2O95714 4834 aa2.61□□□□□ -1.99
CAPN3-212ENST00000564503 C1orf134Q5TEV5 83 aa2.61□□□□□ -1.99
CAPN3-212ENST00000564503 A8MUU9 505 aa2.59□□□□□ -1.99
CAPN3-212ENST00000564503 SPINK1P00995 79 aa2.59□□□□□ -1.99
CAPN3-212ENST00000564503 DNAH7Q8WXX0 4024 aa2.59□□□□□ -2
CAPN3-212ENST00000564503 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
CAPN3-212ENST00000564503 COL7A1Q02388 2944 aa2.58□□□□□ -2
CAPN3-212ENST00000564503 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
CAPN3-212ENST00000564503 H0YAA0 97 aa2.57□□□□□ -2
CAPN3-212ENST00000564503 Q6ZSA8 131 aa2.57□□□□□ -2
CAPN3-212ENST00000564503 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
CAPN3-212ENST00000564503 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 A0A1B0GU33 70 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 KRTAP1-4P0C5Y4 121 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
CAPN3-212ENST00000564503 H1FX-AS1Q4G0G2 97 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 LINC00304Q8N9R0 145 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 TYMSOSQ8TAI1 123 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 HECTD4Q9Y4D8 3996 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 DNAH2Q9P225 4427 aa2.56□□□□□ -2
CAPN3-212ENST00000564503 FRAS1Q86XX4 4008 aa2.55□□□□□ -2
CAPN3-212ENST00000564503 DNAH11Q96DT5 4516 aa2.55□□□□□ -2
CAPN3-212ENST00000564503 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
CAPN3-212ENST00000564503 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
CAPN3-212ENST00000564503 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
CAPN3-212ENST00000564503 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
CAPN3-212ENST00000564503 ROMO1P60602 79 aa2.52□□□□□ -2.01
CAPN3-212ENST00000564503 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
CAPN3-212ENST00000564503 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
CAPN3-212ENST00000564503 COX6B2Q6YFQ2 88 aa2.49□□□□□ -2.01
CAPN3-212ENST00000564503 STAB2Q8WWQ8 2551 aa2.49□□□□□ -2.01
CAPN3-212ENST00000564503 C9orf92A6NGG3 77 aa2.48□□□□□ -2.01
CAPN3-212ENST00000564503 STARD9Q9P2P6 4700 aa2.48□□□□□ -2.01
CAPN3-212ENST00000564503 DNAH5Q8TE73 4624 aa2.48□□□□□ -2.01
CAPN3-212ENST00000564503 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
CAPN3-212ENST00000564503 PKD1P98161 4303 aa2.47□□□□□ -2.01
CAPN3-212ENST00000564503 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
CAPN3-212ENST00000564503 HERC1Q15751 4861 aa2.46□□□□□ -2.02
CAPN3-212ENST00000564503 KRTAP12-2P59991 146 aa2.45□□□□□ -2.02
CAPN3-212ENST00000564503 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
CAPN3-212ENST00000564503 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
CAPN3-212ENST00000564503 KMT2AQ03164 3969 aa2.43□□□□□ -2.02
CAPN3-212ENST00000564503 P0C880 135 aa2.43□□□□□ -2.02
CAPN3-212ENST00000564503 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
CAPN3-212ENST00000564503 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
CAPN3-212ENST00000564503 SPINT4Q6UDR6 99 aa2.42□□□□□ -2.02
CAPN3-212ENST00000564503 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
CAPN3-212ENST00000564503 S4R3F8 94 aa2.4□□□□□ -2.03
CAPN3-212ENST00000564503 LRP1BQ9NZR2 4599 aa2.4□□□□□ -2.03
CAPN3-212ENST00000564503 A0A0D9SG42 100 aa2.39□□□□□ -2.03
CAPN3-212ENST00000564503 KRTAP13-4Q3LI77 160 aa2.39□□□□□ -2.03
CAPN3-212ENST00000564503 PKHD1L1Q86WI1 4243 aa2.37□□□□□ -2.03
CAPN3-212ENST00000564503 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
CAPN3-212ENST00000564503 SMR3BP02814 79 aaPredicted RBP2.37□□□□□ -2.03
CAPN3-212ENST00000564503 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
CAPN3-212ENST00000564503 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
CAPN3-212ENST00000564503 APOBP04114 4563 aaKnown RBP2.35□□□□□ -2.03
CAPN3-212ENST00000564503 VPS13BQ7Z7G8 4022 aa2.35□□□□□ -2.03
CAPN3-212ENST00000564503 PKHD1P08F94 4074 aa2.35□□□□□ -2.03
CAPN3-212ENST00000564503 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
CAPN3-212ENST00000564503 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
CAPN3-212ENST00000564503 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
CAPN3-212ENST00000564503 M0QZ58 72 aa2.32□□□□□ -2.04
CAPN3-212ENST00000564503 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
CAPN3-212ENST00000564503 TNXBP22105 4242 aa2.29□□□□□ -2.04
CAPN3-212ENST00000564503 DMBT1Q9UGM3 2413 aaPredicted RBP2.29□□□□□ -2.04
CAPN3-212ENST00000564503 R4GN34 69 aa2.29□□□□□ -2.04
CAPN3-212ENST00000564503 HSPG2P98160 4391 aa2.28□□□□□ -2.04
CAPN3-212ENST00000564503 FAT1Q14517 4588 aa2.28□□□□□ -2.04
CAPN3-212ENST00000564503 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.04
CAPN3-212ENST00000564503 DYNC1H1Q14204 4646 aaKnown RBP2.27□□□□□ -2.05
CAPN3-212ENST00000564503 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
CAPN3-212ENST00000564503 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
CAPN3-212ENST00000564503 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CAPN3-212ENST00000564503 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
CAPN3-212ENST00000564503 RNF213Q63HN8 5207 aa2.23□□□□□ -2.05
CAPN3-212ENST00000564503 MUC2Q02817 5179 aa2.23□□□□□ -2.05
CAPN3-212ENST00000564503 Q5VSD8 79 aa2.23□□□□□ -2.05
CAPN3-212ENST00000564503 PLAC4Q8WY50 150 aa2.22□□□□□ -2.05
CAPN3-212ENST00000564503 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms