RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
NME3-206ENST00000564252 IMUPQ9GZP8 106 aa10.34□□□□□ -0.75
NME3-206ENST00000564252 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
NME3-206ENST00000564252 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
NME3-206ENST00000564252 F8W1H4 67 aa10.28□□□□□ -0.76
NME3-206ENST00000564252 GTF2H5Q6ZYL4 71 aa10.28□□□□□ -0.76
NME3-206ENST00000564252 H0YAA0 97 aa10.24□□□□□ -0.77
NME3-206ENST00000564252 NDUFC1O43677 76 aa10.2□□□□□ -0.78
NME3-206ENST00000564252 H0Y9P7 68 aa10.14□□□□□ -0.79
NME3-206ENST00000564252 UQCRQO14949 82 aa10.14□□□□□ -0.79
NME3-206ENST00000564252 ATOX1O00244 68 aa10.12□□□□□ -0.79
NME3-206ENST00000564252 ADM2Q7Z4H4 148 aa10.11□□□□□ -0.79
NME3-206ENST00000564252 ACYP1P07311 99 aa10.09□□□□□ -0.79
NME3-206ENST00000564252 A8MUN3 132 aa10.08□□□□□ -0.8
NME3-206ENST00000564252 ATP5EP2Q5VTU8 51 aa10.08□□□□□ -0.8
NME3-206ENST00000564252 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
NME3-206ENST00000564252 MT1XP80297 61 aa10.05□□□□□ -0.8
NME3-206ENST00000564252 PRO2289Q9P1D8 64 aa10.05□□□□□ -0.8
NME3-206ENST00000564252 SPRR2FQ96RM1 72 aa10.04□□□□□ -0.8
NME3-206ENST00000564252 FAM240AA0A1B0GVK7 77 aa10.02□□□□□ -0.81
NME3-206ENST00000564252 KRTAP2-3P0C7H8 128 aa10.02□□□□□ -0.81
NME3-206ENST00000564252 KRTAP2-4Q9BYR9 128 aa10.02□□□□□ -0.81
NME3-206ENST00000564252 SPRR2EP22531 72 aa9.96□□□□□ -0.82
NME3-206ENST00000564252 SPRR2BP35325 72 aa9.96□□□□□ -0.82
NME3-206ENST00000564252 SPRR2AP35326 72 aa9.96□□□□□ -0.82
NME3-206ENST00000564252 PLAC4Q8WY50 150 aa9.95□□□□□ -0.82
NME3-206ENST00000564252 LINC00208Q96KT6 92 aa9.95□□□□□ -0.82
NME3-206ENST00000564252 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
NME3-206ENST00000564252 KRTAP8-1Q8IUC2 63 aa9.89□□□□□ -0.83
NME3-206ENST00000564252 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
NME3-206ENST00000564252 R4GN34 69 aa9.87□□□□□ -0.83
NME3-206ENST00000564252 P0C880 135 aa9.86□□□□□ -0.83
NME3-206ENST00000564252 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
NME3-206ENST00000564252 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
NME3-206ENST00000564252 MP68P56378 58 aa9.82□□□□□ -0.84
NME3-206ENST00000564252 LCE1AQ5T7P2 110 aa9.81□□□□□ -0.84
NME3-206ENST00000564252 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
NME3-206ENST00000564252 M0QZ58 72 aa9.78□□□□□ -0.84
NME3-206ENST00000564252 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
NME3-206ENST00000564252 KRTAP4-8A0A0G2JLE6 195 aa9.72□□□□□ -0.85
NME3-206ENST00000564252 KRTAP4-8Q9BYQ9 185 aa9.72□□□□□ -0.85
NME3-206ENST00000564252 DMAC1Q96GE9 116 aa9.69□□□□□ -0.86
NME3-206ENST00000564252 KRTAP2-2Q9BYT5 123 aa9.68□□□□□ -0.86
NME3-206ENST00000564252 KRTAP2-1Q9BYU5 128 aa9.68□□□□□ -0.86
NME3-206ENST00000564252 LINC01554Q52M75 96 aa9.65□□□□□ -0.86
NME3-206ENST00000564252 H3BPC8 53 aa9.64□□□□□ -0.87
NME3-206ENST00000564252 SPRR2DP22532 72 aa9.63□□□□□ -0.87
NME3-206ENST00000564252 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
NME3-206ENST00000564252 KRTAP10-12P60413 245 aa9.54□□□□□ -0.88
NME3-206ENST00000564252 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.9
NME3-206ENST00000564252 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
NME3-206ENST00000564252 LCE3BQ5TA77 95 aa9.4□□□□□ -0.9
NME3-206ENST00000564252 A0A1B0GV90 55 aa9.38□□□□□ -0.91
NME3-206ENST00000564252 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
NME3-206ENST00000564252 ACYP2P14621 99 aa9.37□□□□□ -0.91
NME3-206ENST00000564252 J3QR89 54 aa9.31□□□□□ -0.92
NME3-206ENST00000564252 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
NME3-206ENST00000564252 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
NME3-206ENST00000564252 SMIM20Q8N5G0 67 aa9.11□□□□□ -0.95
NME3-206ENST00000564252 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
NME3-206ENST00000564252 DSTQ03001 7570 aaKnown RBP9.05□□□□□ -0.96
NME3-206ENST00000564252 CAMK2N1Q7Z7J9 78 aa9.01□□□□□ -0.97
NME3-206ENST00000564252 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
NME3-206ENST00000564252 KRTAP19-7Q3SYF9 63 aa8.99□□□□□ -0.97
NME3-206ENST00000564252 LCE5AQ5TCM9 118 aa8.99□□□□□ -0.97
NME3-206ENST00000564252 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
NME3-206ENST00000564252 MT1EP04732 61 aa8.93□□□□□ -0.98
NME3-206ENST00000564252 KRTAP19-3Q7Z4W3 81 aa8.91□□□□□ -0.98
NME3-206ENST00000564252 GPR98Q8WXG9 6306 aa8.87□□□□□ -0.99
NME3-206ENST00000564252 KRTAP4-9Q9BYQ8 210 aa8.83□□□□□ -1
NME3-206ENST00000564252 K7ERU9 68 aa8.8□□□□□ -1
NME3-206ENST00000564252 A0A0D9SG42 100 aa8.74□□□□□ -1.01
NME3-206ENST00000564252 COA5Q86WW8 74 aa8.72□□□□□ -1.01
NME3-206ENST00000564252 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
NME3-206ENST00000564252 SERP2Q8N6R1 65 aa8.7□□□□□ -1.02
NME3-206ENST00000564252 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
NME3-206ENST00000564252 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
NME3-206ENST00000564252 MT1GP13640 62 aa8.65□□□□□ -1.02
NME3-206ENST00000564252 SEC61GP60059 68 aa8.65□□□□□ -1.02
NME3-206ENST00000564252 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
NME3-206ENST00000564252 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
NME3-206ENST00000564252 LCE1DQ5T752 114 aa8.6□□□□□ -1.03
NME3-206ENST00000564252 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
NME3-206ENST00000564252 A0A1B0GU33 70 aa8.56□□□□□ -1.04
NME3-206ENST00000564252 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
NME3-206ENST00000564252 MT1MQ8N339 61 aa8.52□□□□□ -1.05
NME3-206ENST00000564252 HMCN1Q96RW7 5635 aa8.51□□□□□ -1.05
NME3-206ENST00000564252 LCE4AQ5TA78 99 aa8.5□□□□□ -1.05
NME3-206ENST00000564252 MT1LQ93083 61 aa8.48□□□□□ -1.05
NME3-206ENST00000564252 MT4P47944 62 aa8.45□□□□□ -1.06
NME3-206ENST00000564252 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
NME3-206ENST00000564252 COX7CP15954 63 aa8.33□□□□□ -1.08
NME3-206ENST00000564252 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
NME3-206ENST00000564252 SMIM26A0A096LP01 95 aa8.32□□□□□ -1.08
NME3-206ENST00000564252 H7BZZ5 65 aa8.32□□□□□ -1.08
NME3-206ENST00000564252 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
NME3-206ENST00000564252 KRTAP5-4Q6L8H1 288 aa8.31□□□□□ -1.08
NME3-206ENST00000564252 AHNAK2Q8IVF2 5795 aa8.3□□□□□ -1.08
NME3-206ENST00000564252 A8MU10 97 aa8.28□□□□□ -1.08
NME3-206ENST00000564252 A0A1B0GU69 56 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms