RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 H3BMG7 143 aa2.28□□□□□ -2.04
LINC00254-201ENST00000563416 TMEM256-PLSCR3K7ERE1 68 aa2.28□□□□□ -2.04
LINC00254-201ENST00000563416 TEN1Q86WV5 123 aa2.28□□□□□ -2.04
LINC00254-201ENST00000563416 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
LINC00254-201ENST00000563416 C9orf92A6NGG3 77 aa2.27□□□□□ -2.05
LINC00254-201ENST00000563416 FABP2P12104 132 aa2.27□□□□□ -2.05
LINC00254-201ENST00000563416 Q96NJ1 140 aa2.27□□□□□ -2.05
LINC00254-201ENST00000563416 A0A087WSZ3 146 aa2.26□□□□□ -2.05
LINC00254-201ENST00000563416 TRBV7-4A0A0J9YYF1 115 aa2.26□□□□□ -2.05
LINC00254-201ENST00000563416 P0C880 135 aa2.26□□□□□ -2.05
LINC00254-201ENST00000563416 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
LINC00254-201ENST00000563416 RPL37P61927 97 aaKnown RBP2.25□□□□□ -2.05
LINC00254-201ENST00000563416 ATXN8Q156A1 80 aa2.25□□□□□ -2.05
LINC00254-201ENST00000563416 Q6ZQT0 140 aa2.25□□□□□ -2.05
LINC00254-201ENST00000563416 NAA38Q9BRA0 125 aaKnown RBP2.25□□□□□ -2.05
LINC00254-201ENST00000563416 TRBV20-1A0A075B6N2 111 aa2.24□□□□□ -2.05
LINC00254-201ENST00000563416 CCKP06307 115 aa2.24□□□□□ -2.05
LINC00254-201ENST00000563416 BAALC-AS2P0C853 105 aa2.24□□□□□ -2.05
LINC00254-201ENST00000563416 RBM3P98179 157 aaKnown RBP2.24□□□□□ -2.05
LINC00254-201ENST00000563416 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
LINC00254-201ENST00000563416 FLGP20930 4061 aaPredicted RBP2.23□□□□□ -2.05
LINC00254-201ENST00000563416 JMJD7-PLA2G4BH0Y9G9 81 aa2.23□□□□□ -2.05
LINC00254-201ENST00000563416 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
LINC00254-201ENST00000563416 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
LINC00254-201ENST00000563416 DSCR8Q96T75 97 aa2.23□□□□□ -2.05
LINC00254-201ENST00000563416 LINC00472Q9H8W2 130 aa2.23□□□□□ -2.05
LINC00254-201ENST00000563416 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
LINC00254-201ENST00000563416 A0A1W2PPM0 123 aa2.22□□□□□ -2.05
LINC00254-201ENST00000563416 C9JAW5 83 aa2.22□□□□□ -2.05
LINC00254-201ENST00000563416 OBSCN-AS1Q96MR7 158 aa2.22□□□□□ -2.05
LINC00254-201ENST00000563416 J3KT08 172 aa2.21□□□□□ -2.06
LINC00254-201ENST00000563416 PDE6GP18545 87 aa2.21□□□□□ -2.06
LINC00254-201ENST00000563416 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
LINC00254-201ENST00000563416 VPS25Q9BRG1 176 aa2.2□□□□□ -2.06
LINC00254-201ENST00000563416 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
LINC00254-201ENST00000563416 C14orf132Q9NPU4 83 aa2.19□□□□□ -2.06
LINC00254-201ENST00000563416 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
LINC00254-201ENST00000563416 SPCS1Q9Y6A9 102 aa2.18□□□□□ -2.06
LINC00254-201ENST00000563416 K7EP34 96 aa2.17□□□□□ -2.06
LINC00254-201ENST00000563416 MT1HP80294 61 aa2.17□□□□□ -2.06
LINC00254-201ENST00000563416 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
LINC00254-201ENST00000563416 NDUFB1O75438 58 aa2.16□□□□□ -2.06
LINC00254-201ENST00000563416 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
LINC00254-201ENST00000563416 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
LINC00254-201ENST00000563416 NREPQ16612 68 aa2.15□□□□□ -2.07
LINC00254-201ENST00000563416 C7orf65Q6ZTY9 151 aa2.15□□□□□ -2.07
LINC00254-201ENST00000563416 MMP24-AS1A0A0U1RRL7 71 aa2.14□□□□□ -2.07
LINC00254-201ENST00000563416 GTF2H5Q6ZYL4 71 aa2.14□□□□□ -2.07
LINC00254-201ENST00000563416 F8W1H4 67 aa2.13□□□□□ -2.07
LINC00254-201ENST00000563416 K7EQZ3 153 aa2.13□□□□□ -2.07
LINC00254-201ENST00000563416 Q1T7F1 81 aa2.13□□□□□ -2.07
LINC00254-201ENST00000563416 TMEM254Q8TBM7 123 aa2.13□□□□□ -2.07
LINC00254-201ENST00000563416 ZCCHC13Q8WW36 166 aaKnown RBP2.13□□□□□ -2.07
LINC00254-201ENST00000563416 COX6B2Q6YFQ2 88 aa2.12□□□□□ -2.07
LINC00254-201ENST00000563416 MRPL34Q9BQ48 92 aaKnown RBP2.12□□□□□ -2.07
LINC00254-201ENST00000563416 LINC00846Q9NV44 126 aa2.12□□□□□ -2.07
LINC00254-201ENST00000563416 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
LINC00254-201ENST00000563416 ROMO1P60602 79 aa2.11□□□□□ -2.07
LINC00254-201ENST00000563416 ETDBQ3ZM63 59 aa2.11□□□□□ -2.07
LINC00254-201ENST00000563416 SPINK7P58062 85 aa2.1□□□□□ -2.07
LINC00254-201ENST00000563416 UBL5Q9BZL1 73 aa2.1□□□□□ -2.07
LINC00254-201ENST00000563416 M0R2T5 61 aa2.09□□□□□ -2.07
LINC00254-201ENST00000563416 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
LINC00254-201ENST00000563416 WFDC13Q8IUB5 93 aa2.08□□□□□ -2.08
LINC00254-201ENST00000563416 HCG22E2RYF7 251 aa2.07□□□□□ -2.08
LINC00254-201ENST00000563416 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
LINC00254-201ENST00000563416 UQCRQO14949 82 aa2.06□□□□□ -2.08
LINC00254-201ENST00000563416 ACYP1P07311 99 aa2.06□□□□□ -2.08
LINC00254-201ENST00000563416 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
LINC00254-201ENST00000563416 A0A1B0GV90 55 aa2.05□□□□□ -2.08
LINC00254-201ENST00000563416 ATP5EP2Q5VTU8 51 aa2.05□□□□□ -2.08
LINC00254-201ENST00000563416 COA5Q86WW8 74 aa2.05□□□□□ -2.08
LINC00254-201ENST00000563416 MT2AP02795 61 aa2.04□□□□□ -2.08
LINC00254-201ENST00000563416 J3QR89 54 aa2.03□□□□□ -2.08
LINC00254-201ENST00000563416 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
LINC00254-201ENST00000563416 TP53AIP1Q9HCN2 124 aa2.03□□□□□ -2.08
LINC00254-201ENST00000563416 USH2AO75445 5202 aa2.02□□□□□ -2.09
LINC00254-201ENST00000563416 MT1FP04733 61 aa2.02□□□□□ -2.09
LINC00254-201ENST00000563416 H1FX-AS1Q4G0G2 97 aa2.02□□□□□ -2.09
LINC00254-201ENST00000563416 LINC00643Q86TS7 51 aa2.02□□□□□ -2.09
LINC00254-201ENST00000563416 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
LINC00254-201ENST00000563416 SSPOA2VEC9 5147 aa2□□□□□ -2.09
LINC00254-201ENST00000563416 TRAV22A0A0B4J277 110 aa2□□□□□ -2.09
LINC00254-201ENST00000563416 A0A087WVE0 104 aa1.99□□□□□ -2.09
LINC00254-201ENST00000563416 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
LINC00254-201ENST00000563416 CYP4F30PQ9H0H9 118 aa1.99□□□□□ -2.09
LINC00254-201ENST00000563416 LOC101927531A0A1B0GV80 90 aa1.98□□□□□ -2.09
LINC00254-201ENST00000563416 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
LINC00254-201ENST00000563416 ATOX1O00244 68 aa1.97□□□□□ -2.09
LINC00254-201ENST00000563416 H0Y9P7 68 aa1.96□□□□□ -2.1
LINC00254-201ENST00000563416 S4R3F8 94 aa1.96□□□□□ -2.1
LINC00254-201ENST00000563416 K7ERU9 68 aa1.95□□□□□ -2.1
LINC00254-201ENST00000563416 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
LINC00254-201ENST00000563416 COX7CP15954 63 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 KLKP1Q107X0 134 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 CYSTM1Q9H1C7 97 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
LINC00254-201ENST00000563416 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms