RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 LCA10Q71F78 164 aa4.54□□□□□ -1.68
SNX29-202ENST00000563308 C1orf64Q8NEQ6 169 aa4.54□□□□□ -1.68
SNX29-202ENST00000563308 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
SNX29-202ENST00000563308 S4R3F8 94 aa4.54□□□□□ -1.68
SNX29-202ENST00000563308 K7EP34 96 aa4.53□□□□□ -1.68
SNX29-202ENST00000563308 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
SNX29-202ENST00000563308 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
SNX29-202ENST00000563308 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
SNX29-202ENST00000563308 PCP4P48539 62 aa4.51□□□□□ -1.69
SNX29-202ENST00000563308 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SNX29-202ENST00000563308 Q5VV11 94 aa4.49□□□□□ -1.69
SNX29-202ENST00000563308 GTF2H5Q6ZYL4 71 aa4.49□□□□□ -1.69
SNX29-202ENST00000563308 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
SNX29-202ENST00000563308 K7ERU9 68 aa4.48□□□□□ -1.69
SNX29-202ENST00000563308 IMUPQ9GZP8 106 aa4.48□□□□□ -1.69
SNX29-202ENST00000563308 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
SNX29-202ENST00000563308 A0A087WVE0 104 aa4.46□□□□□ -1.7
SNX29-202ENST00000563308 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
SNX29-202ENST00000563308 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.7
SNX29-202ENST00000563308 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
SNX29-202ENST00000563308 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
SNX29-202ENST00000563308 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SNX29-202ENST00000563308 F8W1H4 67 aa4.42□□□□□ -1.7
SNX29-202ENST00000563308 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
SNX29-202ENST00000563308 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
SNX29-202ENST00000563308 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
SNX29-202ENST00000563308 SCGB1A1P11684 91 aa4.38□□□□□ -1.71
SNX29-202ENST00000563308 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
SNX29-202ENST00000563308 J3QR89 54 aa4.37□□□□□ -1.71
SNX29-202ENST00000563308 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
SNX29-202ENST00000563308 H0YAA0 97 aa4.33□□□□□ -1.72
SNX29-202ENST00000563308 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SNX29-202ENST00000563308 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SNX29-202ENST00000563308 UQCRQO14949 82 aa4.32□□□□□ -1.72
SNX29-202ENST00000563308 ACYP1P07311 99 aa4.32□□□□□ -1.72
SNX29-202ENST00000563308 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
SNX29-202ENST00000563308 H0Y9P7 68 aa4.31□□□□□ -1.72
SNX29-202ENST00000563308 ATP5EP2Q5VTU8 51 aa4.31□□□□□ -1.72
SNX29-202ENST00000563308 NDUFC1O43677 76 aa4.3□□□□□ -1.72
SNX29-202ENST00000563308 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
SNX29-202ENST00000563308 AHNAK2Q8IVF2 5795 aa4.3□□□□□ -1.72
SNX29-202ENST00000563308 ATOX1O00244 68 aa4.29□□□□□ -1.72
SNX29-202ENST00000563308 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
SNX29-202ENST00000563308 A8MUN3 132 aa4.26□□□□□ -1.73
SNX29-202ENST00000563308 MT1XP80297 61 aa4.26□□□□□ -1.73
SNX29-202ENST00000563308 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
SNX29-202ENST00000563308 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
SNX29-202ENST00000563308 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
SNX29-202ENST00000563308 LINC00208Q96KT6 92 aa4.24□□□□□ -1.73
SNX29-202ENST00000563308 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
SNX29-202ENST00000563308 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
SNX29-202ENST00000563308 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
SNX29-202ENST00000563308 P0C880 135 aa4.19□□□□□ -1.74
SNX29-202ENST00000563308 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
SNX29-202ENST00000563308 MP68P56378 58 aa4.17□□□□□ -1.74
SNX29-202ENST00000563308 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
SNX29-202ENST00000563308 MT4P47944 62 aa4.15□□□□□ -1.75
SNX29-202ENST00000563308 KRTAP12-2P59991 146 aa4.15□□□□□ -1.75
SNX29-202ENST00000563308 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
SNX29-202ENST00000563308 R4GN34 69 aa4.14□□□□□ -1.75
SNX29-202ENST00000563308 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
SNX29-202ENST00000563308 M0QZ58 72 aa4.12□□□□□ -1.75
SNX29-202ENST00000563308 H3BPC8 53 aa4.11□□□□□ -1.75
SNX29-202ENST00000563308 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
SNX29-202ENST00000563308 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
SNX29-202ENST00000563308 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
SNX29-202ENST00000563308 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
SNX29-202ENST00000563308 CCDC179H3BU77 68 aa4.07□□□□□ -1.76
SNX29-202ENST00000563308 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
SNX29-202ENST00000563308 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
SNX29-202ENST00000563308 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
SNX29-202ENST00000563308 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
SNX29-202ENST00000563308 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
SNX29-202ENST00000563308 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
SNX29-202ENST00000563308 COX7CP15954 63 aa4□□□□□ -1.77
SNX29-202ENST00000563308 ACYP2P14621 99 aa3.98□□□□□ -1.77
SNX29-202ENST00000563308 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.78
SNX29-202ENST00000563308 SERP2Q8N6R1 65 aa3.96□□□□□ -1.78
SNX29-202ENST00000563308 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
SNX29-202ENST00000563308 TMEM258P61165 79 aa3.92□□□□□ -1.78
SNX29-202ENST00000563308 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
SNX29-202ENST00000563308 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
SNX29-202ENST00000563308 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
SNX29-202ENST00000563308 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
SNX29-202ENST00000563308 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
SNX29-202ENST00000563308 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
SNX29-202ENST00000563308 SPANXA2-OT1Q8N9U9 137 aa3.83□□□□□ -1.8
SNX29-202ENST00000563308 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
SNX29-202ENST00000563308 H7BZZ5 65 aa3.81□□□□□ -1.8
SNX29-202ENST00000563308 ATP5EP56381 51 aaPredicted RBP3.81□□□□□ -1.8
SNX29-202ENST00000563308 SERP1Q9Y6X1 66 aa3.81□□□□□ -1.8
SNX29-202ENST00000563308 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
SNX29-202ENST00000563308 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
SNX29-202ENST00000563308 MT1EP04732 61 aa3.77□□□□□ -1.81
SNX29-202ENST00000563308 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
SNX29-202ENST00000563308 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
SNX29-202ENST00000563308 COA5Q86WW8 74 aa3.73□□□□□ -1.81
SNX29-202ENST00000563308 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
SNX29-202ENST00000563308 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
SNX29-202ENST00000563308 A0A0D9SG42 100 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms