RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
LPCAT4-204ENST00000563240 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
LPCAT4-204ENST00000563240 FAM240AA0A1B0GVK7 77 aa6.78□□□□□ -1.32
LPCAT4-204ENST00000563240 H0Y9P7 68 aa6.78□□□□□ -1.32
LPCAT4-204ENST00000563240 UQCRQO14949 82 aa6.78□□□□□ -1.32
LPCAT4-204ENST00000563240 ATOX1O00244 68 aa6.73□□□□□ -1.33
LPCAT4-204ENST00000563240 NDUFC1O43677 76 aa6.71□□□□□ -1.34
LPCAT4-204ENST00000563240 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
LPCAT4-204ENST00000563240 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
LPCAT4-204ENST00000563240 LINC00643Q86TS7 51 aa6.69□□□□□ -1.34
LPCAT4-204ENST00000563240 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
LPCAT4-204ENST00000563240 LINC00208Q96KT6 92 aa6.68□□□□□ -1.34
LPCAT4-204ENST00000563240 A0A1B0GV90 55 aa6.62□□□□□ -1.35
LPCAT4-204ENST00000563240 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
LPCAT4-204ENST00000563240 A8MUN3 132 aa6.61□□□□□ -1.35
LPCAT4-204ENST00000563240 MP68P56378 58 aa6.61□□□□□ -1.35
LPCAT4-204ENST00000563240 H0YAA0 97 aa6.6□□□□□ -1.35
LPCAT4-204ENST00000563240 OCR1Q9BZK8 76 aa6.6□□□□□ -1.35
LPCAT4-204ENST00000563240 NEBP20929 6669 aa6.49□□□□□ -1.37
LPCAT4-204ENST00000563240 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
LPCAT4-204ENST00000563240 J3QR89 54 aa6.46□□□□□ -1.38
LPCAT4-204ENST00000563240 H3BPC8 53 aa6.45□□□□□ -1.38
LPCAT4-204ENST00000563240 P0C880 135 aa6.45□□□□□ -1.38
LPCAT4-204ENST00000563240 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
LPCAT4-204ENST00000563240 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
LPCAT4-204ENST00000563240 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
LPCAT4-204ENST00000563240 R4GN34 69 aa6.44□□□□□ -1.38
LPCAT4-204ENST00000563240 DMAC1Q96GE9 116 aa6.43□□□□□ -1.38
LPCAT4-204ENST00000563240 M0QZ58 72 aa6.41□□□□□ -1.38
LPCAT4-204ENST00000563240 MT1XP80297 61 aa6.41□□□□□ -1.38
LPCAT4-204ENST00000563240 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
LPCAT4-204ENST00000563240 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
LPCAT4-204ENST00000563240 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
LPCAT4-204ENST00000563240 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
LPCAT4-204ENST00000563240 KMT2DO14686 5537 aa6.34□□□□□ -1.39
LPCAT4-204ENST00000563240 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
LPCAT4-204ENST00000563240 MT-ATP8P03928 68 aa6.29□□□□□ -1.4
LPCAT4-204ENST00000563240 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
LPCAT4-204ENST00000563240 ACYP2P14621 99 aa6.28□□□□□ -1.4
LPCAT4-204ENST00000563240 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
LPCAT4-204ENST00000563240 SPRR2EP22531 72 aa6.24□□□□□ -1.41
LPCAT4-204ENST00000563240 SPRR2BP35325 72 aa6.24□□□□□ -1.41
LPCAT4-204ENST00000563240 SPRR2AP35326 72 aa6.24□□□□□ -1.41
LPCAT4-204ENST00000563240 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
LPCAT4-204ENST00000563240 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
LPCAT4-204ENST00000563240 KRTAP12-2P59991 146 aa6.21□□□□□ -1.42
LPCAT4-204ENST00000563240 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
LPCAT4-204ENST00000563240 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
LPCAT4-204ENST00000563240 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
LPCAT4-204ENST00000563240 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
LPCAT4-204ENST00000563240 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
LPCAT4-204ENST00000563240 K7ERU9 68 aa6.17□□□□□ -1.42
LPCAT4-204ENST00000563240 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
LPCAT4-204ENST00000563240 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
LPCAT4-204ENST00000563240 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
LPCAT4-204ENST00000563240 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
LPCAT4-204ENST00000563240 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
LPCAT4-204ENST00000563240 SPRR2DP22532 72 aa6.03□□□□□ -1.44
LPCAT4-204ENST00000563240 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
LPCAT4-204ENST00000563240 SERP2Q8N6R1 65 aa6□□□□□ -1.45
LPCAT4-204ENST00000563240 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
LPCAT4-204ENST00000563240 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
LPCAT4-204ENST00000563240 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
LPCAT4-204ENST00000563240 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
LPCAT4-204ENST00000563240 COA5Q86WW8 74 aa5.91□□□□□ -1.46
LPCAT4-204ENST00000563240 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
LPCAT4-204ENST00000563240 A0A0D9SG42 100 aa5.85□□□□□ -1.47
LPCAT4-204ENST00000563240 SEC61GP60059 68 aa5.84□□□□□ -1.47
LPCAT4-204ENST00000563240 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
LPCAT4-204ENST00000563240 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
LPCAT4-204ENST00000563240 COX7CP15954 63 aa5.79□□□□□ -1.48
LPCAT4-204ENST00000563240 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
LPCAT4-204ENST00000563240 A0A1B0GU33 70 aa5.75□□□□□ -1.49
LPCAT4-204ENST00000563240 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
LPCAT4-204ENST00000563240 H7BZZ5 65 aa5.72□□□□□ -1.49
LPCAT4-204ENST00000563240 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
LPCAT4-204ENST00000563240 MT1EP04732 61 aa5.68□□□□□ -1.5
LPCAT4-204ENST00000563240 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
LPCAT4-204ENST00000563240 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
LPCAT4-204ENST00000563240 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
LPCAT4-204ENST00000563240 A0A1B0GU69 56 aa5.62□□□□□ -1.51
LPCAT4-204ENST00000563240 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
LPCAT4-204ENST00000563240 A8MU10 97 aa5.58□□□□□ -1.52
LPCAT4-204ENST00000563240 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
LPCAT4-204ENST00000563240 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
LPCAT4-204ENST00000563240 H3BS24 57 aa5.54□□□□□ -1.52
LPCAT4-204ENST00000563240 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
LPCAT4-204ENST00000563240 MT1GP13640 62 aa5.5□□□□□ -1.53
LPCAT4-204ENST00000563240 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
LPCAT4-204ENST00000563240 CCDC179H3BU77 68 aa5.48□□□□□ -1.53
LPCAT4-204ENST00000563240 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
LPCAT4-204ENST00000563240 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
LPCAT4-204ENST00000563240 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
LPCAT4-204ENST00000563240 TNP1P09430 55 aa5.43□□□□□ -1.54
LPCAT4-204ENST00000563240 MT1MQ8N339 61 aa5.42□□□□□ -1.54
LPCAT4-204ENST00000563240 MT1LQ93083 61 aa5.42□□□□□ -1.54
LPCAT4-204ENST00000563240 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
LPCAT4-204ENST00000563240 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
LPCAT4-204ENST00000563240 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
LPCAT4-204ENST00000563240 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms