RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
USB1-207ENST00000563149 XP32Q5T750 250 aa6.72□□□□□ -1.33
USB1-207ENST00000563149 Q5VSD8 79 aa6.72□□□□□ -1.33
USB1-207ENST00000563149 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
USB1-207ENST00000563149 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
USB1-207ENST00000563149 RYR2Q92736 4967 aa6.7□□□□□ -1.34
USB1-207ENST00000563149 TNXBP22105 4242 aa6.7□□□□□ -1.34
USB1-207ENST00000563149 S4R3F8 94 aa6.69□□□□□ -1.34
USB1-207ENST00000563149 HSPG2P98160 4391 aa6.64□□□□□ -1.35
USB1-207ENST00000563149 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
USB1-207ENST00000563149 ROMO1P60602 79 aa6.62□□□□□ -1.35
USB1-207ENST00000563149 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
USB1-207ENST00000563149 MT1HL1P0DM35 61 aa6.56□□□□□ -1.36
USB1-207ENST00000563149 A0A0D9SG42 100 aa6.52□□□□□ -1.37
USB1-207ENST00000563149 P0C880 135 aa6.52□□□□□ -1.37
USB1-207ENST00000563149 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
USB1-207ENST00000563149 KMT2CQ8NEZ4 4911 aaKnown RBP6.48□□□□□ -1.37
USB1-207ENST00000563149 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
USB1-207ENST00000563149 RYR1P21817 5038 aa6.47□□□□□ -1.37
USB1-207ENST00000563149 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
USB1-207ENST00000563149 DMBT1Q9UGM3 2413 aaPredicted RBP6.45□□□□□ -1.38
USB1-207ENST00000563149 M0QZ58 72 aa6.43□□□□□ -1.38
USB1-207ENST00000563149 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
USB1-207ENST00000563149 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
USB1-207ENST00000563149 LCE2BO14633 110 aa6.38□□□□□ -1.39
USB1-207ENST00000563149 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
USB1-207ENST00000563149 RYR3Q15413 4870 aa6.34□□□□□ -1.39
USB1-207ENST00000563149 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.4
USB1-207ENST00000563149 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
USB1-207ENST00000563149 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
USB1-207ENST00000563149 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
USB1-207ENST00000563149 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
USB1-207ENST00000563149 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
USB1-207ENST00000563149 LPAP08519 4548 aa6.23□□□□□ -1.41
USB1-207ENST00000563149 LRP2P98164 4655 aa6.23□□□□□ -1.41
USB1-207ENST00000563149 R4GN34 69 aa6.2□□□□□ -1.42
USB1-207ENST00000563149 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
USB1-207ENST00000563149 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
USB1-207ENST00000563149 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
USB1-207ENST00000563149 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
USB1-207ENST00000563149 KRTAP4-1Q9BYQ7 146 aa6.07□□□□□ -1.44
USB1-207ENST00000563149 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
USB1-207ENST00000563149 KRTAP19-2Q3LHN2 52 aa6.03□□□□□ -1.44
USB1-207ENST00000563149 A0A0A0MQY5 61 aa6.01□□□□□ -1.45
USB1-207ENST00000563149 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
USB1-207ENST00000563149 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
USB1-207ENST00000563149 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
USB1-207ENST00000563149 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
USB1-207ENST00000563149 HERC2O95714 4834 aa5.91□□□□□ -1.46
USB1-207ENST00000563149 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
USB1-207ENST00000563149 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
USB1-207ENST00000563149 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
USB1-207ENST00000563149 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
USB1-207ENST00000563149 HERC1Q15751 4861 aa5.74□□□□□ -1.49
USB1-207ENST00000563149 TNP1P09430 55 aa5.72□□□□□ -1.49
USB1-207ENST00000563149 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
USB1-207ENST00000563149 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
USB1-207ENST00000563149 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
USB1-207ENST00000563149 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
USB1-207ENST00000563149 MUC2Q02817 5179 aa5.49□□□□□ -1.53
USB1-207ENST00000563149 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
USB1-207ENST00000563149 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
USB1-207ENST00000563149 M0R2T5 61 aa5.48□□□□□ -1.53
USB1-207ENST00000563149 MT1HP80294 61 aa5.47□□□□□ -1.53
USB1-207ENST00000563149 MT2AP02795 61 aa5.4□□□□□ -1.54
USB1-207ENST00000563149 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
USB1-207ENST00000563149 MT1FP04733 61 aa5.38□□□□□ -1.55
USB1-207ENST00000563149 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
USB1-207ENST00000563149 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
USB1-207ENST00000563149 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
USB1-207ENST00000563149 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
USB1-207ENST00000563149 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
USB1-207ENST00000563149 MT1BP07438 61 aa5.25□□□□□ -1.57
USB1-207ENST00000563149 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
USB1-207ENST00000563149 MT1XP80297 61 aa5.21□□□□□ -1.58
USB1-207ENST00000563149 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
USB1-207ENST00000563149 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
USB1-207ENST00000563149 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
USB1-207ENST00000563149 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
USB1-207ENST00000563149 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
USB1-207ENST00000563149 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
USB1-207ENST00000563149 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
USB1-207ENST00000563149 INE1O15225 51 aa4.91□□□□□ -1.62
USB1-207ENST00000563149 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
USB1-207ENST00000563149 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
USB1-207ENST00000563149 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
USB1-207ENST00000563149 KRTAP4-8A0A0G2JLE6 195 aa4.68□□□□□ -1.66
USB1-207ENST00000563149 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
USB1-207ENST00000563149 KRTAP19-7Q3SYF9 63 aa4.65□□□□□ -1.67
USB1-207ENST00000563149 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
USB1-207ENST00000563149 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
USB1-207ENST00000563149 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
USB1-207ENST00000563149 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
USB1-207ENST00000563149 MT1LQ93083 61 aa4.53□□□□□ -1.69
USB1-207ENST00000563149 MT1EP04732 61 aa4.52□□□□□ -1.69
USB1-207ENST00000563149 USH2AO75445 5202 aa4.5□□□□□ -1.69
USB1-207ENST00000563149 KMT2DO14686 5537 aa4.47□□□□□ -1.69
USB1-207ENST00000563149 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
USB1-207ENST00000563149 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
USB1-207ENST00000563149 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms