RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 HSPB8Q9UJY1 196 aa2.29□□□□□ -2.04
UBR1-203ENST00000562173 LEPROTL1O95214 131 aa2.28□□□□□ -2.04
UBR1-203ENST00000562173 TRGC2P03986 189 aa2.28□□□□□ -2.04
UBR1-203ENST00000562173 PRR15Q8IV56 129 aa2.28□□□□□ -2.04
UBR1-203ENST00000562173 HIST3H2BBQ8N257 126 aa2.28□□□□□ -2.04
UBR1-203ENST00000562173 CHCHD1Q96BP2 118 aaKnown RBP2.28□□□□□ -2.04
UBR1-203ENST00000562173 TRBV7-6A0A0J9YX20 115 aa2.27□□□□□ -2.05
UBR1-203ENST00000562173 Q6JHZ5 121 aa2.27□□□□□ -2.05
UBR1-203ENST00000562173 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
UBR1-203ENST00000562173 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
UBR1-203ENST00000562173 hADV29S1A0JD25 119 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 PLNP26678 52 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 ATOH7Q8N100 152 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 HIST1H2BLQ99880 126 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
UBR1-203ENST00000562173 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
UBR1-203ENST00000562173 TRAV13-2A0A0B4J235 113 aa2.25□□□□□ -2.05
UBR1-203ENST00000562173 TIMM17BO60830 172 aa2.25□□□□□ -2.05
UBR1-203ENST00000562173 MT1XP80297 61 aa2.25□□□□□ -2.05
UBR1-203ENST00000562173 C1orf64Q8NEQ6 169 aa2.25□□□□□ -2.05
UBR1-203ENST00000562173 TRAV7A0A075B6U4 112 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 FAM236AA0A1B0GUQ0 79 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 FAM236BA0A1B0GV22 79 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 H3BT86 120 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 HIST1H2BKO60814 126 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 HIST1H2BJP06899 126 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 C3orf79P0CE67 100 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 FXYD2P54710 66 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 VAMP8Q9BV40 100 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 R4GN34 69 aa2.24□□□□□ -2.05
UBR1-203ENST00000562173 TMEM256-PLSCR3K7ERE1 68 aa2.23□□□□□ -2.05
UBR1-203ENST00000562173 H1FX-AS1Q4G0G2 97 aa2.23□□□□□ -2.05
UBR1-203ENST00000562173 VPS25Q9BRG1 176 aa2.23□□□□□ -2.05
UBR1-203ENST00000562173 LINC00472Q9H8W2 130 aa2.23□□□□□ -2.05
UBR1-203ENST00000562173 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
UBR1-203ENST00000562173 SYS1-DBNDD2H3BUS1 97 aa2.22□□□□□ -2.05
UBR1-203ENST00000562173 M0R143 59 aa2.22□□□□□ -2.05
UBR1-203ENST00000562173 KRTDAPP60985 99 aa2.22□□□□□ -2.05
UBR1-203ENST00000562173 TEN1Q86WV5 123 aa2.22□□□□□ -2.05
UBR1-203ENST00000562173 SNHG12Q9BXW3 62 aa2.22□□□□□ -2.05
UBR1-203ENST00000562173 NHP2Q9NX24 153 aaKnown RBP2.22□□□□□ -2.05
UBR1-203ENST00000562173 C9JAW5 83 aa2.21□□□□□ -2.06
UBR1-203ENST00000562173 PYY3Q5JQD4 70 aa2.2□□□□□ -2.06
UBR1-203ENST00000562173 LINC01545Q5VT33 79 aa2.2□□□□□ -2.06
UBR1-203ENST00000562173 UQCR10Q9UDW1 63 aa2.2□□□□□ -2.06
UBR1-203ENST00000562173 H3BMG7 143 aa2.19□□□□□ -2.06
UBR1-203ENST00000562173 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
UBR1-203ENST00000562173 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
UBR1-203ENST00000562173 A0A087WVE0 104 aa2.18□□□□□ -2.06
UBR1-203ENST00000562173 K7ERU9 68 aa2.18□□□□□ -2.06
UBR1-203ENST00000562173 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
UBR1-203ENST00000562173 FABP2P12104 132 aa2.17□□□□□ -2.06
UBR1-203ENST00000562173 MT4P47944 62 aa2.17□□□□□ -2.06
UBR1-203ENST00000562173 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
UBR1-203ENST00000562173 P0C880 135 aa2.16□□□□□ -2.06
UBR1-203ENST00000562173 IFITM1P13164 125 aa2.16□□□□□ -2.06
UBR1-203ENST00000562173 GTF2H5Q6ZYL4 71 aa2.16□□□□□ -2.06
UBR1-203ENST00000562173 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
UBR1-203ENST00000562173 J3QR89 54 aa2.14□□□□□ -2.07
UBR1-203ENST00000562173 TMEM258P61165 79 aa2.14□□□□□ -2.07
UBR1-203ENST00000562173 HSD52Q0P140 79 aa2.14□□□□□ -2.07
UBR1-203ENST00000562173 Q6ZQT0 140 aa2.14□□□□□ -2.07
UBR1-203ENST00000562173 IGKV3D-7A0A0C4DH55 119 aa2.13□□□□□ -2.07
UBR1-203ENST00000562173 C7orf65Q6ZTY9 151 aa2.13□□□□□ -2.07
UBR1-203ENST00000562173 COPS9Q8WXC6 57 aa2.13□□□□□ -2.07
UBR1-203ENST00000562173 K7ERJ3 54 aa2.12□□□□□ -2.07
UBR1-203ENST00000562173 CCKP06307 115 aa2.12□□□□□ -2.07
UBR1-203ENST00000562173 BAALC-AS2P0C853 105 aa2.12□□□□□ -2.07
UBR1-203ENST00000562173 COX8AP10176 69 aa2.12□□□□□ -2.07
UBR1-203ENST00000562173 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
UBR1-203ENST00000562173 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
UBR1-203ENST00000562173 RAB37Q96AX2 223 aa2.11□□□□□ -2.07
UBR1-203ENST00000562173 C14orf132Q9NPU4 83 aa2.11□□□□□ -2.07
UBR1-203ENST00000562173 TRBV7-4A0A0J9YYF1 115 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 MMP24-AS1A0A0U1RRL7 71 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 UQCRQO14949 82 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 PPDPFLQ8WWR9 84 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 HIGD1BQ9P298 99 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 S4R3F8 94 aa2.1□□□□□ -2.07
UBR1-203ENST00000562173 TRACP01848 142 aa2.09□□□□□ -2.07
UBR1-203ENST00000562173 COX6CP09669 75 aa2.09□□□□□ -2.07
UBR1-203ENST00000562173 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
UBR1-203ENST00000562173 SPCS1Q9Y6A9 102 aa2.09□□□□□ -2.07
UBR1-203ENST00000562173 SNCGO76070 127 aa2.08□□□□□ -2.08
UBR1-203ENST00000562173 A0A1W2PPM0 123 aa2.07□□□□□ -2.08
UBR1-203ENST00000562173 F8W1H4 67 aa2.07□□□□□ -2.08
UBR1-203ENST00000562173 K7EP34 96 aa2.07□□□□□ -2.08
UBR1-203ENST00000562173 K7EQZ3 153 aa2.07□□□□□ -2.08
UBR1-203ENST00000562173 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
UBR1-203ENST00000562173 ROMO1P60602 79 aa2.06□□□□□ -2.08
UBR1-203ENST00000562173 hDV103S1A0JD37 113 aa2.05□□□□□ -2.08
UBR1-203ENST00000562173 ATXN8Q156A1 80 aa2.05□□□□□ -2.08
UBR1-203ENST00000562173 MRPL34Q9BQ48 92 aaKnown RBP2.05□□□□□ -2.08
UBR1-203ENST00000562173 CCDC179H3BU77 68 aa2.04□□□□□ -2.08
UBR1-203ENST00000562173 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
UBR1-203ENST00000562173 CSAG1Q6PB30 78 aa2.04□□□□□ -2.08
UBR1-203ENST00000562173 NAA38Q9BRA0 125 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms