RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 NDUFS5O43920 106 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 CDK2AP2O75956 126 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 IGLV7-43P04211 117 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 SEC61GP60059 68 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 SSBP3-AS1Q7Z2R9 100 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 COL7A1Q02388 2944 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 SPINK7P58062 85 aa1.39□□□□□ -2.19
SPG11-223ENST00000560858 Q5W150 140 aa1.39□□□□□ -2.19
SPG11-223ENST00000560858 Q6ZSA8 131 aa1.39□□□□□ -2.19
SPG11-223ENST00000560858 C7orf65Q6ZTY9 151 aa1.39□□□□□ -2.19
SPG11-223ENST00000560858 DNAH2Q9P225 4427 aa1.39□□□□□ -2.19
SPG11-223ENST00000560858 ACYP2P14621 99 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 KRTAP13-2Q52LG2 175 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 ANAPC11Q9NYG5 84 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 COL6A5A8TX70 2615 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 DNAH11Q96DT5 4516 aa1.38□□□□□ -2.19
SPG11-223ENST00000560858 SRRM2Q9UQ35 2752 aaKnown RBP1.37□□□□□ -2.19
SPG11-223ENST00000560858 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 DNAH5Q8TE73 4624 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 SACSQ9NZJ4 4579 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 C1orf134Q5TEV5 83 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 SPINK6Q6UWN8 80 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 SPTSSBQ8NFR3 76 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 CIRBP-AS1Q8TBR5 109 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 RBM12B-AS1Q9P1G2 102 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 KMT2AQ03164 3969 aa1.37□□□□□ -2.19
SPG11-223ENST00000560858 FBN3Q75N90 2809 aa1.36□□□□□ -2.19
SPG11-223ENST00000560858 LINC00313P59037 77 aa1.36□□□□□ -2.19
SPG11-223ENST00000560858 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
SPG11-223ENST00000560858 PKHD1L1Q86WI1 4243 aa1.35□□□□□ -2.19
SPG11-223ENST00000560858 SPATA8Q6RVD6 105 aa1.35□□□□□ -2.19
SPG11-223ENST00000560858 A0A1B0GU69 56 aa1.34□□□□□ -2.19
SPG11-223ENST00000560858 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SPG11-223ENST00000560858 PKD1P98161 4303 aa1.33□□□□□ -2.2
SPG11-223ENST00000560858 UQCR11O14957 56 aa1.33□□□□□ -2.2
SPG11-223ENST00000560858 SPINK1P00995 79 aa1.33□□□□□ -2.2
SPG11-223ENST00000560858 MEGF8Q7Z7M0 2845 aa1.33□□□□□ -2.2
SPG11-223ENST00000560858 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
SPG11-223ENST00000560858 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 FAT2Q9NYQ8 4349 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 A8MUU9 505 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 LY6G6CO95867 125 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 MIR22HGQ0VDD5 57 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 C20orf166-AS1Q96NR2 134 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 RETNLBQ9BQ08 111 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 HYDINQ4G0P3 5121 aa1.32□□□□□ -2.2
SPG11-223ENST00000560858 LINC00304Q8N9R0 145 aa1.31□□□□□ -2.2
SPG11-223ENST00000560858 TYMSOSQ8TAI1 123 aa1.31□□□□□ -2.2
SPG11-223ENST00000560858 APOBP04114 4563 aaKnown RBP1.3□□□□□ -2.2
SPG11-223ENST00000560858 H0YAA0 97 aa1.3□□□□□ -2.2
SPG11-223ENST00000560858 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
SPG11-223ENST00000560858 LINC01554Q52M75 96 aa1.3□□□□□ -2.2
SPG11-223ENST00000560858 ADM2Q7Z4H4 148 aa1.3□□□□□ -2.2
SPG11-223ENST00000560858 TGP01266 2768 aa1.3□□□□□ -2.2
SPG11-223ENST00000560858 TNXBP22105 4242 aa1.29□□□□□ -2.2
SPG11-223ENST00000560858 LRP1BQ9NZR2 4599 aa1.29□□□□□ -2.2
SPG11-223ENST00000560858 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.2
SPG11-223ENST00000560858 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
SPG11-223ENST00000560858 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
SPG11-223ENST00000560858 H1FX-AS1Q4G0G2 97 aa1.28□□□□□ -2.2
SPG11-223ENST00000560858 CSAG1Q6PB30 78 aa1.27□□□□□ -2.21
SPG11-223ENST00000560858 COX6B2Q6YFQ2 88 aa1.27□□□□□ -2.21
SPG11-223ENST00000560858 A0A1B0GU33 70 aa1.26□□□□□ -2.21
SPG11-223ENST00000560858 C9orf92A6NGG3 77 aa1.26□□□□□ -2.21
SPG11-223ENST00000560858 KRTAP25-1Q3LHN0 102 aa1.26□□□□□ -2.21
SPG11-223ENST00000560858 KRTAP21-3Q3LHN1 58 aa1.26□□□□□ -2.21
SPG11-223ENST00000560858 RYR2Q92736 4967 aa1.26□□□□□ -2.21
SPG11-223ENST00000560858 FAT1Q14517 4588 aa1.25□□□□□ -2.21
SPG11-223ENST00000560858 HSPG2P98160 4391 aa1.25□□□□□ -2.21
SPG11-223ENST00000560858 KRTAP10-10P60014 251 aa1.24□□□□□ -2.21
SPG11-223ENST00000560858 RPL37P61927 97 aaKnown RBP1.24□□□□□ -2.21
SPG11-223ENST00000560858 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
SPG11-223ENST00000560858 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
SPG11-223ENST00000560858 LRP1Q07954 4544 aaKnown RBP1.23□□□□□ -2.21
SPG11-223ENST00000560858 K7ERS5 55 aa1.22□□□□□ -2.21
SPG11-223ENST00000560858 ROMO1P60602 79 aa1.22□□□□□ -2.21
SPG11-223ENST00000560858 S4R3F8 94 aa1.22□□□□□ -2.21
SPG11-223ENST00000560858 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
SPG11-223ENST00000560858 RYR1P21817 5038 aa1.22□□□□□ -2.21
SPG11-223ENST00000560858 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 P0C880 135 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 TPRXLQ17RH7 258 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 Q5VSD8 79 aa1.19□□□□□ -2.22
SPG11-223ENST00000560858 DMBT1Q9UGM3 2413 aaPredicted RBP1.18□□□□□ -2.22
SPG11-223ENST00000560858 A0A0D9SG42 100 aa1.17□□□□□ -2.22
SPG11-223ENST00000560858 M0QZ58 72 aa1.17□□□□□ -2.22
SPG11-223ENST00000560858 CRIPTQ9P021 101 aa1.16□□□□□ -2.22
SPG11-223ENST00000560858 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
SPG11-223ENST00000560858 RYR3Q15413 4870 aa1.15□□□□□ -2.22
SPG11-223ENST00000560858 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
SPG11-223ENST00000560858 KMT2CQ8NEZ4 4911 aaKnown RBP1.15□□□□□ -2.23
SPG11-223ENST00000560858 SPINT4Q6UDR6 99 aa1.13□□□□□ -2.23
SPG11-223ENST00000560858 KIAA1109Q2LD37 5005 aa1.12□□□□□ -2.23
SPG11-223ENST00000560858 MUC17Q685J3 4493 aa1.12□□□□□ -2.23
SPG11-223ENST00000560858 KRTAP19-2Q3LHN2 52 aa1.12□□□□□ -2.23
SPG11-223ENST00000560858 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
SPG11-223ENST00000560858 R4GN34 69 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 458.3 ms