RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 TLN2Q9Y4G6 2542 aa-0.32□□□□□ -2.46
CTDSPL2-207ENST00000559738 TRIOO75962 3097 aa-0.32□□□□□ -2.46
CTDSPL2-207ENST00000559738 PLNP26678 52 aa-0.32□□□□□ -2.46
CTDSPL2-207ENST00000559738 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
CTDSPL2-207ENST00000559738 IQGAP1P46940 1657 aa-0.33□□□□□ -2.46
CTDSPL2-207ENST00000559738 ABCC8Q09428 1581 aa-0.34□□□□□ -2.46
CTDSPL2-207ENST00000559738 UBR4Q5T4S7 5183 aa-0.34□□□□□ -2.46
CTDSPL2-207ENST00000559738 USP9YO00507 2555 aaPredicted RBP-0.35□□□□□ -2.46
CTDSPL2-207ENST00000559738 DNAH8Q96JB1 4490 aa-0.35□□□□□ -2.47
CTDSPL2-207ENST00000559738 FAT1Q14517 4588 aa-0.35□□□□□ -2.47
CTDSPL2-207ENST00000559738 DSTQ03001 7570 aaKnown RBP-0.35□□□□□ -2.47
CTDSPL2-207ENST00000559738 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.35□□□□□ -2.47
CTDSPL2-207ENST00000559738 COL12A1Q99715 3063 aa-0.36□□□□□ -2.47
CTDSPL2-207ENST00000559738 FANCD2Q9BXW9 1451 aa-0.36□□□□□ -2.47
CTDSPL2-207ENST00000559738 MUC17Q685J3 4493 aa-0.37□□□□□ -2.47
CTDSPL2-207ENST00000559738 DNAH7Q8WXX0 4024 aa-0.37□□□□□ -2.47
CTDSPL2-207ENST00000559738 COL6A5A8TX70 2615 aa-0.37□□□□□ -2.47
CTDSPL2-207ENST00000559738 USP9XQ93008 2570 aaPredicted RBP-0.38□□□□□ -2.47
CTDSPL2-207ENST00000559738 TFF3Q07654 80 aa-0.38□□□□□ -2.47
CTDSPL2-207ENST00000559738 CLPSL2Q6UWE3 100 aa-0.38□□□□□ -2.47
CTDSPL2-207ENST00000559738 CMC2Q9NRP2 79 aa-0.39□□□□□ -2.47
CTDSPL2-207ENST00000559738 SPTBN5Q9NRC6 3674 aaKnown RBP-0.4□□□□□ -2.47
CTDSPL2-207ENST00000559738 A8MTW9 85 aa-0.4□□□□□ -2.47
CTDSPL2-207ENST00000559738 M0QZ58 72 aa-0.4□□□□□ -2.47
CTDSPL2-207ENST00000559738 CELSR3Q9NYQ7 3312 aa-0.41□□□□□ -2.47
CTDSPL2-207ENST00000559738 ITPR1Q14643 2758 aa-0.41□□□□□ -2.48
CTDSPL2-207ENST00000559738 DEFB1P60022 68 aa-0.42□□□□□ -2.48
CTDSPL2-207ENST00000559738 KRTAP19-5Q3LI72 72 aa-0.42□□□□□ -2.48
CTDSPL2-207ENST00000559738 USH2AO75445 5202 aa-0.42□□□□□ -2.48
CTDSPL2-207ENST00000559738 RELNP78509 3460 aa-0.44□□□□□ -2.48
CTDSPL2-207ENST00000559738 C5orf42Q9H799 3197 aa-0.44□□□□□ -2.48
CTDSPL2-207ENST00000559738 FRYQ5TBA9 3013 aa-0.44□□□□□ -2.48
CTDSPL2-207ENST00000559738 KRTAP20-2Q3LI61 65 aa-0.45□□□□□ -2.48
CTDSPL2-207ENST00000559738 HERC2O95714 4834 aa-0.45□□□□□ -2.48
CTDSPL2-207ENST00000559738 CMYA5Q8N3K9 4069 aa-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 NFAT5O94916 1531 aa-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 KRTAP8-1Q8IUC2 63 aa-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 PLECQ15149 4684 aaKnown RBP-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 CLTCL1P53675 1640 aa-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 TEX15Q9BXT5 2789 aa-0.46□□□□□ -2.48
CTDSPL2-207ENST00000559738 DEFB131AP59861 70 aa-0.47□□□□□ -2.48
CTDSPL2-207ENST00000559738 SMIM2Q9BVW6 85 aa-0.47□□□□□ -2.48
CTDSPL2-207ENST00000559738 SPTAN1Q13813 2472 aaKnown RBP-0.48□□□□□ -2.49
CTDSPL2-207ENST00000559738 SMR3BP02814 79 aaPredicted RBP-0.48□□□□□ -2.49
CTDSPL2-207ENST00000559738 RYR1P21817 5038 aa-0.49□□□□□ -2.49
CTDSPL2-207ENST00000559738 MT4P47944 62 aa-0.5□□□□□ -2.49
CTDSPL2-207ENST00000559738 SNRPGP15A8MWD9 76 aa-0.51□□□□□ -2.49
CTDSPL2-207ENST00000559738 SPART-AS1P0CW21 52 aa-0.51□□□□□ -2.49
CTDSPL2-207ENST00000559738 MT1HP80294 61 aa-0.51□□□□□ -2.49
CTDSPL2-207ENST00000559738 LINC01546A6NGU7 62 aa-0.52□□□□□ -2.49
CTDSPL2-207ENST00000559738 POLR2KP53803 58 aaKnown RBP-0.52□□□□□ -2.49
CTDSPL2-207ENST00000559738 CHD7Q9P2D1 2997 aa-0.53□□□□□ -2.49
CTDSPL2-207ENST00000559738 EPPK1P58107 5090 aaKnown RBP-0.53□□□□□ -2.49
CTDSPL2-207ENST00000559738 ADGRG4Q8IZF6 3080 aa-0.53□□□□□ -2.49
CTDSPL2-207ENST00000559738 MGAQ8IWI9 3026 aa-0.54□□□□□ -2.5
CTDSPL2-207ENST00000559738 TRPM2O94759 1503 aa-0.54□□□□□ -2.5
CTDSPL2-207ENST00000559738 DNAH10Q8IVF4 4471 aa-0.55□□□□□ -2.5
CTDSPL2-207ENST00000559738 DNHD1Q96M86 4753 aa-0.55□□□□□ -2.5
CTDSPL2-207ENST00000559738 SRCAPQ6ZRS2 3230 aa-0.55□□□□□ -2.5
CTDSPL2-207ENST00000559738 DYNC1H1Q14204 4646 aaKnown RBP-0.56□□□□□ -2.5
CTDSPL2-207ENST00000559738 NIPBLQ6KC79 2804 aaeCLIP-0.57□□□□□ -2.5
CTDSPL2-207ENST00000559738 IQGAP2Q13576 1575 aa-0.57□□□□□ -2.5
CTDSPL2-207ENST00000559738 LRBAP50851 2863 aa-0.58□□□□□ -2.5
CTDSPL2-207ENST00000559738 DNAH17Q9UFH2 4485 aa-0.58□□□□□ -2.5
CTDSPL2-207ENST00000559738 CSMD1Q96PZ7 3565 aa-0.58□□□□□ -2.5
CTDSPL2-207ENST00000559738 NDUFA1O15239 70 aa-0.59□□□□□ -2.5
CTDSPL2-207ENST00000559738 LAMA3Q16787 3333 aa-0.6□□□□□ -2.51
CTDSPL2-207ENST00000559738 MYO9AB2RTY4 2548 aa-0.6□□□□□ -2.51
CTDSPL2-207ENST00000559738 BIRC6Q9NR09 4857 aa-0.6□□□□□ -2.51
CTDSPL2-207ENST00000559738 TRRAPQ9Y4A5 3859 aa-0.62□□□□□ -2.51
CTDSPL2-207ENST00000559738 CRYBG3Q68DQ2 2970 aa-0.62□□□□□ -2.51
CTDSPL2-207ENST00000559738 ZFHX4Q86UP3 3567 aa-0.63□□□□□ -2.51
CTDSPL2-207ENST00000559738 DOPEY1Q5JWR5 2465 aa-0.64□□□□□ -2.51
CTDSPL2-207ENST00000559738 LAMA2P24043 3122 aaKnown RBP-0.65□□□□□ -2.51
CTDSPL2-207ENST00000559738 CFAP46Q8IYW2 2715 aa-0.67□□□□□ -2.52
CTDSPL2-207ENST00000559738 MT1XP80297 61 aa-0.67□□□□□ -2.52
CTDSPL2-207ENST00000559738 MT1EP04732 61 aa-0.68□□□□□ -2.52
CTDSPL2-207ENST00000559738 TOMM5Q8N4H5 51 aa-0.68□□□□□ -2.52
CTDSPL2-207ENST00000559738 RNF213Q63HN8 5207 aa-0.7□□□□□ -2.52
CTDSPL2-207ENST00000559738 LEAP2Q969E1 77 aa-0.7□□□□□ -2.52
CTDSPL2-207ENST00000559738 HYDINQ4G0P3 5121 aa-0.73□□□□□ -2.53
CTDSPL2-207ENST00000559738 MT1LQ93083 61 aa-0.73□□□□□ -2.53
CTDSPL2-207ENST00000559738 EYSQ5T1H1 3165 aa-0.73□□□□□ -2.53
CTDSPL2-207ENST00000559738 CEP295Q9C0D2 2601 aa-0.74□□□□□ -2.53
CTDSPL2-207ENST00000559738 DNAH5Q8TE73 4624 aa-0.74□□□□□ -2.53
CTDSPL2-207ENST00000559738 DMXL2Q8TDJ6 3036 aa-0.75□□□□□ -2.53
CTDSPL2-207ENST00000559738 ATP7AQ04656 1500 aa-0.76□□□□□ -2.53
CTDSPL2-207ENST00000559738 RYR2Q92736 4967 aa-0.76□□□□□ -2.53
CTDSPL2-207ENST00000559738 SMG1Q96Q15 3661 aaKnown RBP-0.77□□□□□ -2.53
CTDSPL2-207ENST00000559738 TLN1Q9Y490 2541 aaKnown RBP-0.78□□□□□ -2.53
CTDSPL2-207ENST00000559738 RYR3Q15413 4870 aa-0.81□□□□□ -2.54
CTDSPL2-207ENST00000559738 TOMM7Q9P0U1 55 aa-0.81□□□□□ -2.54
CTDSPL2-207ENST00000559738 SAMD9LQ8IVG5 1584 aa-0.82□□□□□ -2.54
CTDSPL2-207ENST00000559738 CSMD2Q7Z408 3487 aa-0.82□□□□□ -2.54
CTDSPL2-207ENST00000559738 DEFB136Q30KP8 78 aa-0.82□□□□□ -2.54
CTDSPL2-207ENST00000559738 DEFB4AO15263 64 aa-0.83□□□□□ -2.54
CTDSPL2-207ENST00000559738 ITPR2Q14571 2701 aa-0.83□□□□□ -2.54
CTDSPL2-207ENST00000559738 KIAA1109Q2LD37 5005 aa-0.84□□□□□ -2.54
CTDSPL2-207ENST00000559738 NEBP20929 6669 aa-0.84□□□□□ -2.54
CTDSPL2-207ENST00000559738 MT1GP13640 62 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms