RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
CRNDE-207ENST00000559598 Q5VV11 94 aa3.5□□□□□ -1.85
CRNDE-207ENST00000559598 SPTSSBQ8NFR3 76 aa3.5□□□□□ -1.85
CRNDE-207ENST00000559598 KCNQ1DNQ9H478 68 aa3.5□□□□□ -1.85
CRNDE-207ENST00000559598 SPAG11BQ08648 103 aa3.49□□□□□ -1.85
CRNDE-207ENST00000559598 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
CRNDE-207ENST00000559598 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
CRNDE-207ENST00000559598 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
CRNDE-207ENST00000559598 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
CRNDE-207ENST00000559598 A6NN06 94 aa3.47□□□□□ -1.85
CRNDE-207ENST00000559598 CASC2Q6XLA1 102 aa3.47□□□□□ -1.85
CRNDE-207ENST00000559598 SPRR4Q96PI1 79 aa3.47□□□□□ -1.85
CRNDE-207ENST00000559598 CAMK2N2Q96S95 79 aa3.46□□□□□ -1.86
CRNDE-207ENST00000559598 TP53AIP1Q9HCN2 124 aa3.45□□□□□ -1.86
CRNDE-207ENST00000559598 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
CRNDE-207ENST00000559598 UNQ6190/PRO20217Q6UXQ8 127 aa3.44□□□□□ -1.86
CRNDE-207ENST00000559598 Q8N9L7 120 aa3.44□□□□□ -1.86
CRNDE-207ENST00000559598 ZNF861PO60384 105 aa3.43□□□□□ -1.86
CRNDE-207ENST00000559598 C8orf87E5RJ46 101 aa3.42□□□□□ -1.86
CRNDE-207ENST00000559598 H0Y9P7 68 aa3.42□□□□□ -1.86
CRNDE-207ENST00000559598 TLX1NBP0CAT3 122 aa3.42□□□□□ -1.86
CRNDE-207ENST00000559598 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
CRNDE-207ENST00000559598 KRTAP11-1Q8IUC1 163 aa3.41□□□□□ -1.86
CRNDE-207ENST00000559598 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
CRNDE-207ENST00000559598 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 COA5Q86WW8 74 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 LINC00304Q8N9R0 145 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 DEFB105AQ8NG35 78 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 RETNLBQ9BQ08 111 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 C6orf48Q9UBA6 75 aa3.4□□□□□ -1.87
CRNDE-207ENST00000559598 A0A1W2PNM2 257 aa3.39□□□□□ -1.87
CRNDE-207ENST00000559598 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
CRNDE-207ENST00000559598 K7EQZ3 153 aa3.39□□□□□ -1.87
CRNDE-207ENST00000559598 MOBPQ13875 183 aa3.39□□□□□ -1.87
CRNDE-207ENST00000559598 Q6ZRX8 168 aa3.39□□□□□ -1.87
CRNDE-207ENST00000559598 ST20-AS1Q8NBB2 130 aa3.38□□□□□ -1.87
CRNDE-207ENST00000559598 Q8NDZ9 215 aa3.38□□□□□ -1.87
CRNDE-207ENST00000559598 XAGE1AQ9HD64 81 aa3.38□□□□□ -1.87
CRNDE-207ENST00000559598 IGLV8-61A0A075B6I0 122 aa3.37□□□□□ -1.87
CRNDE-207ENST00000559598 A8MWP4 228 aa3.36□□□□□ -1.87
CRNDE-207ENST00000559598 SPRR1AP35321 89 aa3.35□□□□□ -1.87
CRNDE-207ENST00000559598 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
CRNDE-207ENST00000559598 ACYP2P14621 99 aa3.34□□□□□ -1.87
CRNDE-207ENST00000559598 LINC00313P59037 77 aa3.34□□□□□ -1.87
CRNDE-207ENST00000559598 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
CRNDE-207ENST00000559598 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
CRNDE-207ENST00000559598 WFDC13Q8IUB5 93 aa3.34□□□□□ -1.87
CRNDE-207ENST00000559598 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
CRNDE-207ENST00000559598 MT1HP80294 61 aa3.32□□□□□ -1.88
CRNDE-207ENST00000559598 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
CRNDE-207ENST00000559598 KRTAP4-16G5E9R7 235 aaPredicted RBP3.31□□□□□ -1.88
CRNDE-207ENST00000559598 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
CRNDE-207ENST00000559598 A0A087WSZ3 146 aa3.3□□□□□ -1.88
CRNDE-207ENST00000559598 UQCR11O14957 56 aa3.3□□□□□ -1.88
CRNDE-207ENST00000559598 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
CRNDE-207ENST00000559598 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
CRNDE-207ENST00000559598 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
CRNDE-207ENST00000559598 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
CRNDE-207ENST00000559598 A0A1B0GU69 56 aa3.28□□□□□ -1.88
CRNDE-207ENST00000559598 SPRR1BP22528 89 aa3.28□□□□□ -1.88
CRNDE-207ENST00000559598 SPINK7P58062 85 aa3.28□□□□□ -1.88
CRNDE-207ENST00000559598 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
CRNDE-207ENST00000559598 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
CRNDE-207ENST00000559598 SPINK1P00995 79 aa3.27□□□□□ -1.89
CRNDE-207ENST00000559598 HRES1P13985 223 aa3.27□□□□□ -1.89
CRNDE-207ENST00000559598 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
CRNDE-207ENST00000559598 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
CRNDE-207ENST00000559598 M0R2T5 61 aa3.26□□□□□ -1.89
CRNDE-207ENST00000559598 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
CRNDE-207ENST00000559598 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
CRNDE-207ENST00000559598 MMP24-AS1A0A0U1RRL7 71 aa3.25□□□□□ -1.89
CRNDE-207ENST00000559598 USH2AO75445 5202 aa3.25□□□□□ -1.89
CRNDE-207ENST00000559598 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
CRNDE-207ENST00000559598 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
CRNDE-207ENST00000559598 ZNF706Q9Y5V0 76 aaPredicted RBP3.24□□□□□ -1.89
CRNDE-207ENST00000559598 PRLHP81277 87 aa3.23□□□□□ -1.89
CRNDE-207ENST00000559598 MRPL34Q9BQ48 92 aaKnown RBP3.23□□□□□ -1.89
CRNDE-207ENST00000559598 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
CRNDE-207ENST00000559598 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
CRNDE-207ENST00000559598 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
CRNDE-207ENST00000559598 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
CRNDE-207ENST00000559598 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
CRNDE-207ENST00000559598 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
CRNDE-207ENST00000559598 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
CRNDE-207ENST00000559598 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
CRNDE-207ENST00000559598 K7ERS5 55 aa3.18□□□□□ -1.9
CRNDE-207ENST00000559598 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CRNDE-207ENST00000559598 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
CRNDE-207ENST00000559598 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
CRNDE-207ENST00000559598 ROMO1P60602 79 aa3.15□□□□□ -1.91
CRNDE-207ENST00000559598 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
CRNDE-207ENST00000559598 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
CRNDE-207ENST00000559598 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
CRNDE-207ENST00000559598 Q96NJ1 140 aa3.11□□□□□ -1.91
CRNDE-207ENST00000559598 RPL37P61927 97 aaKnown RBP3.1□□□□□ -1.91
CRNDE-207ENST00000559598 A0A0G2JQZ4 141 aa3.09□□□□□ -1.91
CRNDE-207ENST00000559598 A8MUU9 505 aa3.06□□□□□ -1.92
CRNDE-207ENST00000559598 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
CRNDE-207ENST00000559598 Q5W150 140 aa3.05□□□□□ -1.92
CRNDE-207ENST00000559598 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms