RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 C14orf132Q9NPU4 83 aa5.07□□□□□ -1.6
SPG11-214ENST00000558989 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
SPG11-214ENST00000558989 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
SPG11-214ENST00000558989 Q6ZQT0 140 aa5.06□□□□□ -1.6
SPG11-214ENST00000558989 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
SPG11-214ENST00000558989 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
SPG11-214ENST00000558989 MT1HP80294 61 aa5.02□□□□□ -1.61
SPG11-214ENST00000558989 PRO0461Q9UI25 63 aa5.01□□□□□ -1.61
SPG11-214ENST00000558989 M0R2T5 61 aa5□□□□□ -1.61
SPG11-214ENST00000558989 LOC110117498A0A087WWA1 95 aa5□□□□□ -1.61
SPG11-214ENST00000558989 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
SPG11-214ENST00000558989 A0A1B0GU33 70 aa4.99□□□□□ -1.61
SPG11-214ENST00000558989 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
SPG11-214ENST00000558989 NDUFB1O75438 58 aa4.97□□□□□ -1.61
SPG11-214ENST00000558989 PDE6GP18545 87 aa4.97□□□□□ -1.61
SPG11-214ENST00000558989 NREPQ16612 68 aa4.96□□□□□ -1.62
SPG11-214ENST00000558989 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
SPG11-214ENST00000558989 ATOX1O00244 68 aa4.94□□□□□ -1.62
SPG11-214ENST00000558989 Q1T7F1 81 aa4.94□□□□□ -1.62
SPG11-214ENST00000558989 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
SPG11-214ENST00000558989 ETDBQ3ZM63 59 aa4.93□□□□□ -1.62
SPG11-214ENST00000558989 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
SPG11-214ENST00000558989 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
SPG11-214ENST00000558989 K7EQZ3 153 aa4.89□□□□□ -1.63
SPG11-214ENST00000558989 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
SPG11-214ENST00000558989 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
SPG11-214ENST00000558989 HRES1P13985 223 aa4.87□□□□□ -1.63
SPG11-214ENST00000558989 Q8N9L7 120 aa4.87□□□□□ -1.63
SPG11-214ENST00000558989 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
SPG11-214ENST00000558989 KRTAP25-1Q3LHN0 102 aa4.86□□□□□ -1.63
SPG11-214ENST00000558989 SPINK7P58062 85 aa4.85□□□□□ -1.63
SPG11-214ENST00000558989 WFDC13Q8IUB5 93 aa4.85□□□□□ -1.63
SPG11-214ENST00000558989 SERP2Q8N6R1 65 aa4.85□□□□□ -1.63
SPG11-214ENST00000558989 TMEM254Q8TBM7 123 aa4.85□□□□□ -1.63
SPG11-214ENST00000558989 MRPL34Q9BQ48 92 aaKnown RBP4.84□□□□□ -1.63
SPG11-214ENST00000558989 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SPG11-214ENST00000558989 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
SPG11-214ENST00000558989 LINC00846Q9NV44 126 aa4.83□□□□□ -1.64
SPG11-214ENST00000558989 ACYP1P07311 99 aa4.82□□□□□ -1.64
SPG11-214ENST00000558989 NDUFC1O43677 76 aa4.81□□□□□ -1.64
SPG11-214ENST00000558989 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
SPG11-214ENST00000558989 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
SPG11-214ENST00000558989 CYP4F30PQ9H0H9 118 aa4.8□□□□□ -1.64
SPG11-214ENST00000558989 P0C880 135 aa4.79□□□□□ -1.64
SPG11-214ENST00000558989 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
SPG11-214ENST00000558989 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
SPG11-214ENST00000558989 SPTSSBQ8NFR3 76 aa4.75□□□□□ -1.65
SPG11-214ENST00000558989 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
SPG11-214ENST00000558989 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
SPG11-214ENST00000558989 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
SPG11-214ENST00000558989 R4GN34 69 aa4.73□□□□□ -1.65
SPG11-214ENST00000558989 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
SPG11-214ENST00000558989 LINC00643Q86TS7 51 aa4.71□□□□□ -1.66
SPG11-214ENST00000558989 MT2AP02795 61 aa4.7□□□□□ -1.66
SPG11-214ENST00000558989 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
SPG11-214ENST00000558989 H7BZZ5 65 aa4.69□□□□□ -1.66
SPG11-214ENST00000558989 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SPG11-214ENST00000558989 MT1FP04733 61 aa4.67□□□□□ -1.66
SPG11-214ENST00000558989 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
SPG11-214ENST00000558989 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
SPG11-214ENST00000558989 KLKP1Q107X0 134 aa4.65□□□□□ -1.66
SPG11-214ENST00000558989 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.66
SPG11-214ENST00000558989 USH2AO75445 5202 aa4.63□□□□□ -1.67
SPG11-214ENST00000558989 TRAV22A0A0B4J277 110 aa4.6□□□□□ -1.67
SPG11-214ENST00000558989 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
SPG11-214ENST00000558989 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
SPG11-214ENST00000558989 Q5VV11 94 aa4.58□□□□□ -1.68
SPG11-214ENST00000558989 CSAG1Q6PB30 78 aa4.58□□□□□ -1.68
SPG11-214ENST00000558989 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
SPG11-214ENST00000558989 A0A087WVE0 104 aa4.58□□□□□ -1.68
SPG11-214ENST00000558989 DMAC1Q96GE9 116 aa4.57□□□□□ -1.68
SPG11-214ENST00000558989 S4R3F8 94 aa4.53□□□□□ -1.68
SPG11-214ENST00000558989 CHKB-CPT1BH3BT56 60 aa4.53□□□□□ -1.68
SPG11-214ENST00000558989 H0Y9P7 68 aa4.51□□□□□ -1.69
SPG11-214ENST00000558989 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
SPG11-214ENST00000558989 A8MU10 97 aa4.49□□□□□ -1.69
SPG11-214ENST00000558989 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
SPG11-214ENST00000558989 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
SPG11-214ENST00000558989 C20orf197Q8N268 126 aa4.43□□□□□ -1.7
SPG11-214ENST00000558989 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
SPG11-214ENST00000558989 MT3P25713 68 aa4.33□□□□□ -1.72
SPG11-214ENST00000558989 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
SPG11-214ENST00000558989 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
SPG11-214ENST00000558989 MT1BP07438 61 aa4.29□□□□□ -1.72
SPG11-214ENST00000558989 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
SPG11-214ENST00000558989 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
SPG11-214ENST00000558989 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
SPG11-214ENST00000558989 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
SPG11-214ENST00000558989 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
SPG11-214ENST00000558989 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
SPG11-214ENST00000558989 H0YAA0 97 aa4.22□□□□□ -1.73
SPG11-214ENST00000558989 INE1O15225 51 aa4.19□□□□□ -1.74
SPG11-214ENST00000558989 UQCR11O14957 56 aa4.18□□□□□ -1.74
SPG11-214ENST00000558989 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
SPG11-214ENST00000558989 ACYP2P14621 99 aa4.17□□□□□ -1.74
SPG11-214ENST00000558989 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
SPG11-214ENST00000558989 M0QZ58 72 aa4.15□□□□□ -1.75
SPG11-214ENST00000558989 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
SPG11-214ENST00000558989 COA5Q86WW8 74 aa4.11□□□□□ -1.75
SPG11-214ENST00000558989 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms