RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 FAM236AA0A1B0GUQ0 79 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 FAM236BA0A1B0GV22 79 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 A0A1B0GX51 115 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 H0YGX0 51 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
LRRC28-208ENST00000558771 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 C2orf91Q6ZV80 131 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 ANAPC13Q9BS18 74 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 HIGD1BQ9P298 99 aa2.41□□□□□ -2.02
LRRC28-208ENST00000558771 TRACP01848 142 aa2.4□□□□□ -2.03
LRRC28-208ENST00000558771 CCKP06307 115 aa2.4□□□□□ -2.03
LRRC28-208ENST00000558771 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
LRRC28-208ENST00000558771 HIST1H4GQ99525 98 aa2.4□□□□□ -2.03
LRRC28-208ENST00000558771 SPRR2GQ9BYE4 73 aa2.4□□□□□ -2.03
LRRC28-208ENST00000558771 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
LRRC28-208ENST00000558771 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
LRRC28-208ENST00000558771 J3KT08 172 aa2.38□□□□□ -2.03
LRRC28-208ENST00000558771 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
LRRC28-208ENST00000558771 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
LRRC28-208ENST00000558771 C8orf17Q9NRJ1 99 aa2.37□□□□□ -2.03
LRRC28-208ENST00000558771 A0A0B4J2C4 111 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 NDUFB1O75438 58 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 MT-ATP8P03928 68 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 SPRR2DP22532 72 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 ETDBQ3ZM63 59 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
LRRC28-208ENST00000558771 FAM240AA0A1B0GVK7 77 aa2.35□□□□□ -2.03
LRRC28-208ENST00000558771 H3BQ85 93 aa2.34□□□□□ -2.03
LRRC28-208ENST00000558771 CCDC179H3BU77 68 aa2.34□□□□□ -2.03
LRRC28-208ENST00000558771 TMEM256-PLSCR3K7ERE1 68 aa2.34□□□□□ -2.03
LRRC28-208ENST00000558771 DNAL4O96015 105 aa2.34□□□□□ -2.03
LRRC28-208ENST00000558771 CEND1Q8N111 149 aa2.34□□□□□ -2.03
LRRC28-208ENST00000558771 C9JAW5 83 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 UQCRQO14949 82 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 FXYD2P54710 66 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 KLKP1Q107X0 134 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
LRRC28-208ENST00000558771 TMEM258P61165 79 aa2.32□□□□□ -2.04
LRRC28-208ENST00000558771 RBM3P98179 157 aaKnown RBP2.32□□□□□ -2.04
LRRC28-208ENST00000558771 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
LRRC28-208ENST00000558771 Q6ZQT0 140 aa2.32□□□□□ -2.04
LRRC28-208ENST00000558771 C7orf65Q6ZTY9 151 aa2.32□□□□□ -2.04
LRRC28-208ENST00000558771 MRPL34Q9BQ48 92 aaKnown RBP2.32□□□□□ -2.04
LRRC28-208ENST00000558771 PRO1854Q9UHT4 67 aa2.32□□□□□ -2.04
LRRC28-208ENST00000558771 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
LRRC28-208ENST00000558771 CSAG1Q6PB30 78 aa2.31□□□□□ -2.04
LRRC28-208ENST00000558771 TMEM254Q8TBM7 123 aa2.31□□□□□ -2.04
LRRC28-208ENST00000558771 NAA38Q9BRA0 125 aaKnown RBP2.31□□□□□ -2.04
LRRC28-208ENST00000558771 MMP24-AS1A0A0U1RRL7 71 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 NDUFS5O43920 106 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 ACYP1P07311 99 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 Q5W150 140 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 PRR15Q8IV56 129 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 S4R3F8 94 aa2.3□□□□□ -2.04
LRRC28-208ENST00000558771 K7ERJ3 54 aa2.29□□□□□ -2.04
LRRC28-208ENST00000558771 ATOX1O00244 68 aa2.29□□□□□ -2.04
LRRC28-208ENST00000558771 COX7CP15954 63 aa2.29□□□□□ -2.04
LRRC28-208ENST00000558771 LCA10Q71F78 164 aa2.29□□□□□ -2.04
LRRC28-208ENST00000558771 hDV103S1A0JD37 113 aa2.28□□□□□ -2.04
LRRC28-208ENST00000558771 H3BT86 120 aa2.28□□□□□ -2.04
LRRC28-208ENST00000558771 PSMB2P49721 201 aa2.28□□□□□ -2.04
LRRC28-208ENST00000558771 HIST1H4AP62805 103 aaKnown RBP2.28□□□□□ -2.04
LRRC28-208ENST00000558771 MT1XP80297 61 aa2.27□□□□□ -2.05
LRRC28-208ENST00000558771 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
LRRC28-208ENST00000558771 COX6CP09669 75 aa2.26□□□□□ -2.05
LRRC28-208ENST00000558771 ATXN8Q156A1 80 aa2.26□□□□□ -2.05
LRRC28-208ENST00000558771 LINC00643Q86TS7 51 aa2.26□□□□□ -2.05
LRRC28-208ENST00000558771 CRIPTQ9P021 101 aa2.26□□□□□ -2.05
LRRC28-208ENST00000558771 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
LRRC28-208ENST00000558771 K7EQZ3 153 aa2.25□□□□□ -2.05
LRRC28-208ENST00000558771 A0A1B0GW54 56 aa2.24□□□□□ -2.05
LRRC28-208ENST00000558771 BAALC-AS2P0C853 105 aa2.24□□□□□ -2.05
LRRC28-208ENST00000558771 SERP2Q8N6R1 65 aa2.24□□□□□ -2.05
LRRC28-208ENST00000558771 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
LRRC28-208ENST00000558771 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
LRRC28-208ENST00000558771 NREPQ16612 68 aa2.23□□□□□ -2.05
LRRC28-208ENST00000558771 CAMK2N1Q7Z7J9 78 aa2.23□□□□□ -2.05
LRRC28-208ENST00000558771 SERP1Q9Y6X1 66 aa2.23□□□□□ -2.05
LRRC28-208ENST00000558771 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
LRRC28-208ENST00000558771 SMIM26A0A096LP01 95 aa2.22□□□□□ -2.05
LRRC28-208ENST00000558771 HCG22E2RYF7 251 aa2.22□□□□□ -2.05
LRRC28-208ENST00000558771 JMJD7-PLA2G4BH0Y9G9 81 aa2.21□□□□□ -2.06
LRRC28-208ENST00000558771 ATP5EP2Q5VTU8 51 aa2.21□□□□□ -2.06
LRRC28-208ENST00000558771 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
LRRC28-208ENST00000558771 PDE6GP18545 87 aa2.2□□□□□ -2.06
LRRC28-208ENST00000558771 C14orf132Q9NPU4 83 aa2.2□□□□□ -2.06
LRRC28-208ENST00000558771 A0A087WVE0 104 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 A8MUN3 132 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 NDUFC1O43677 76 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
LRRC28-208ENST00000558771 BPY2O14599 106 aa2.17□□□□□ -2.06
LRRC28-208ENST00000558771 Q8N9L7 120 aa2.17□□□□□ -2.06
LRRC28-208ENST00000558771 CYSTM1Q9H1C7 97 aa2.17□□□□□ -2.06
LRRC28-208ENST00000558771 H0YAA0 97 aa2.16□□□□□ -2.06
LRRC28-208ENST00000558771 H7BZZ5 65 aa2.16□□□□□ -2.06
LRRC28-208ENST00000558771 PSPHP1O15172 72 aa2.16□□□□□ -2.06
LRRC28-208ENST00000558771 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms