RNA–Protein interactions for RNA: ENST00000558676.5

NTRK3-212, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 4,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-212ENST00000558676 DNAH1Q9P2D7 4330 aa3.98□□□□□ -1.77
NTRK3-212ENST00000558676 VPS13DQ5THJ4 4388 aa3.95□□□□□ -1.78
NTRK3-212ENST00000558676 DNAH11Q96DT5 4516 aa3.94□□□□□ -1.78
NTRK3-212ENST00000558676 KRTAP3-3Q9BYR6 98 aa3.92□□□□□ -1.78
NTRK3-212ENST00000558676 HYDINQ4G0P3 5121 aa3.92□□□□□ -1.78
NTRK3-212ENST00000558676 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
NTRK3-212ENST00000558676 DNAH2Q9P225 4427 aa3.91□□□□□ -1.78
NTRK3-212ENST00000558676 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
NTRK3-212ENST00000558676 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
NTRK3-212ENST00000558676 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
NTRK3-212ENST00000558676 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
NTRK3-212ENST00000558676 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
NTRK3-212ENST00000558676 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
NTRK3-212ENST00000558676 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.79
NTRK3-212ENST00000558676 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
NTRK3-212ENST00000558676 KMT2CQ8NEZ4 4911 aaKnown RBP3.84□□□□□ -1.8
NTRK3-212ENST00000558676 FAT1Q14517 4588 aa3.83□□□□□ -1.8
NTRK3-212ENST00000558676 DNAH17Q9UFH2 4485 aa3.83□□□□□ -1.8
NTRK3-212ENST00000558676 HECTD4Q9Y4D8 3996 aa3.83□□□□□ -1.8
NTRK3-212ENST00000558676 PKHD1P08F94 4074 aa3.82□□□□□ -1.8
NTRK3-212ENST00000558676 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
NTRK3-212ENST00000558676 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
NTRK3-212ENST00000558676 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
NTRK3-212ENST00000558676 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
NTRK3-212ENST00000558676 DNAH8Q96JB1 4490 aa3.8□□□□□ -1.8
NTRK3-212ENST00000558676 INE1O15225 51 aa3.78□□□□□ -1.8
NTRK3-212ENST00000558676 DYNC1H1Q14204 4646 aaKnown RBP3.78□□□□□ -1.8
NTRK3-212ENST00000558676 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
NTRK3-212ENST00000558676 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
NTRK3-212ENST00000558676 FAT2Q9NYQ8 4349 aa3.73□□□□□ -1.81
NTRK3-212ENST00000558676 KIAA1109Q2LD37 5005 aa3.72□□□□□ -1.81
NTRK3-212ENST00000558676 RYR2Q92736 4967 aa3.71□□□□□ -1.82
NTRK3-212ENST00000558676 APOBP04114 4563 aaKnown RBP3.69□□□□□ -1.82
NTRK3-212ENST00000558676 RYR3Q15413 4870 aa3.68□□□□□ -1.82
NTRK3-212ENST00000558676 PKD1P98161 4303 aa3.68□□□□□ -1.82
NTRK3-212ENST00000558676 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
NTRK3-212ENST00000558676 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
NTRK3-212ENST00000558676 RYR1P21817 5038 aa3.62□□□□□ -1.83
NTRK3-212ENST00000558676 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
NTRK3-212ENST00000558676 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
NTRK3-212ENST00000558676 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
NTRK3-212ENST00000558676 EPPK1P58107 5090 aaKnown RBP3.6□□□□□ -1.83
NTRK3-212ENST00000558676 HSPG2P98160 4391 aa3.55□□□□□ -1.84
NTRK3-212ENST00000558676 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
NTRK3-212ENST00000558676 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
NTRK3-212ENST00000558676 HERC2O95714 4834 aa3.47□□□□□ -1.85
NTRK3-212ENST00000558676 KRTAP4-1Q9BYQ7 146 aa3.46□□□□□ -1.85
NTRK3-212ENST00000558676 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
NTRK3-212ENST00000558676 LRP2P98164 4655 aa3.44□□□□□ -1.86
NTRK3-212ENST00000558676 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
NTRK3-212ENST00000558676 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
NTRK3-212ENST00000558676 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
NTRK3-212ENST00000558676 LPAP08519 4548 aa3.4□□□□□ -1.86
NTRK3-212ENST00000558676 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
NTRK3-212ENST00000558676 TNXBP22105 4242 aa3.38□□□□□ -1.87
NTRK3-212ENST00000558676 HERC1Q15751 4861 aa3.32□□□□□ -1.88
NTRK3-212ENST00000558676 SPRR2GQ9BYE4 73 aa3.31□□□□□ -1.88
NTRK3-212ENST00000558676 MUC2Q02817 5179 aa3.29□□□□□ -1.88
NTRK3-212ENST00000558676 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
NTRK3-212ENST00000558676 MT1HP80294 61 aa3.25□□□□□ -1.89
NTRK3-212ENST00000558676 MT2AP02795 61 aa3.24□□□□□ -1.89
NTRK3-212ENST00000558676 RNF213Q63HN8 5207 aa3.21□□□□□ -1.89
NTRK3-212ENST00000558676 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
NTRK3-212ENST00000558676 MT1FP04733 61 aa3.2□□□□□ -1.9
NTRK3-212ENST00000558676 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
NTRK3-212ENST00000558676 UBR4Q5T4S7 5183 aa3.16□□□□□ -1.9
NTRK3-212ENST00000558676 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
NTRK3-212ENST00000558676 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
NTRK3-212ENST00000558676 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
NTRK3-212ENST00000558676 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
NTRK3-212ENST00000558676 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
NTRK3-212ENST00000558676 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
NTRK3-212ENST00000558676 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
NTRK3-212ENST00000558676 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
NTRK3-212ENST00000558676 LCE2CQ5TA81 110 aa3.07□□□□□ -1.92
NTRK3-212ENST00000558676 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
NTRK3-212ENST00000558676 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
NTRK3-212ENST00000558676 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
NTRK3-212ENST00000558676 MT1XP80297 61 aa3.04□□□□□ -1.92
NTRK3-212ENST00000558676 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
NTRK3-212ENST00000558676 MT1BP07438 61 aa3.01□□□□□ -1.93
NTRK3-212ENST00000558676 KRTAP9-8Q9BYQ0 159 aa3□□□□□ -1.93
NTRK3-212ENST00000558676 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
NTRK3-212ENST00000558676 KRTAP9-6A0A140TA67 174 aa2.93□□□□□ -1.94
NTRK3-212ENST00000558676 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
NTRK3-212ENST00000558676 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
NTRK3-212ENST00000558676 LCE2AQ5TA79 106 aaPredicted RBP2.86□□□□□ -1.95
NTRK3-212ENST00000558676 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.96
NTRK3-212ENST00000558676 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.96
NTRK3-212ENST00000558676 USH2AO75445 5202 aa2.81□□□□□ -1.96
NTRK3-212ENST00000558676 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
NTRK3-212ENST00000558676 LCE2BO14633 110 aa2.8□□□□□ -1.96
NTRK3-212ENST00000558676 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
NTRK3-212ENST00000558676 MT1GP13640 62 aa2.73□□□□□ -1.97
NTRK3-212ENST00000558676 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
NTRK3-212ENST00000558676 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
NTRK3-212ENST00000558676 MT1LQ93083 61 aa2.71□□□□□ -1.98
NTRK3-212ENST00000558676 LCE2DQ5TA82 110 aaPredicted RBP2.7□□□□□ -1.98
NTRK3-212ENST00000558676 MT1EP04732 61 aa2.68□□□□□ -1.98
NTRK3-212ENST00000558676 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms