RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 DNHD1Q96M86 4753 aa4.35□□□□□ -1.71
TRPM1-207ENST00000558445 DNAH9Q9NYC9 4486 aa4.35□□□□□ -1.71
TRPM1-207ENST00000558445 ANK2Q01484 3957 aa4.35□□□□□ -1.71
TRPM1-207ENST00000558445 DNAH2Q9P225 4427 aa4.34□□□□□ -1.71
TRPM1-207ENST00000558445 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.71
TRPM1-207ENST00000558445 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
TRPM1-207ENST00000558445 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
TRPM1-207ENST00000558445 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
TRPM1-207ENST00000558445 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
TRPM1-207ENST00000558445 LYSTQ99698 3801 aa4.24□□□□□ -1.73
TRPM1-207ENST00000558445 KRTAP21-3Q3LHN1 58 aa4.22□□□□□ -1.73
TRPM1-207ENST00000558445 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
TRPM1-207ENST00000558445 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
TRPM1-207ENST00000558445 HECTD4Q9Y4D8 3996 aa4.16□□□□□ -1.74
TRPM1-207ENST00000558445 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
TRPM1-207ENST00000558445 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
TRPM1-207ENST00000558445 CMYA5Q8N3K9 4069 aa4.14□□□□□ -1.75
TRPM1-207ENST00000558445 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
TRPM1-207ENST00000558445 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
TRPM1-207ENST00000558445 DYNC2H1Q8NCM8 4307 aaKnown RBP4.09□□□□□ -1.75
TRPM1-207ENST00000558445 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
TRPM1-207ENST00000558445 DNAH6Q9C0G6 4158 aa4.04□□□□□ -1.76
TRPM1-207ENST00000558445 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
TRPM1-207ENST00000558445 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
TRPM1-207ENST00000558445 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
TRPM1-207ENST00000558445 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
TRPM1-207ENST00000558445 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
TRPM1-207ENST00000558445 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
TRPM1-207ENST00000558445 STARD9Q9P2P6 4700 aa3.98□□□□□ -1.77
TRPM1-207ENST00000558445 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
TRPM1-207ENST00000558445 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
TRPM1-207ENST00000558445 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
TRPM1-207ENST00000558445 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
TRPM1-207ENST00000558445 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
TRPM1-207ENST00000558445 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
TRPM1-207ENST00000558445 RYR3Q15413 4870 aa3.85□□□□□ -1.79
TRPM1-207ENST00000558445 DYNC1H1Q14204 4646 aaKnown RBP3.84□□□□□ -1.79
TRPM1-207ENST00000558445 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
TRPM1-207ENST00000558445 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
TRPM1-207ENST00000558445 FAT1Q14517 4588 aa3.82□□□□□ -1.8
TRPM1-207ENST00000558445 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
TRPM1-207ENST00000558445 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
TRPM1-207ENST00000558445 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
TRPM1-207ENST00000558445 PKHD1L1Q86WI1 4243 aa3.76□□□□□ -1.81
TRPM1-207ENST00000558445 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
TRPM1-207ENST00000558445 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
TRPM1-207ENST00000558445 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
TRPM1-207ENST00000558445 HSPG2P98160 4391 aa3.72□□□□□ -1.81
TRPM1-207ENST00000558445 PKD1P98161 4303 aa3.69□□□□□ -1.82
TRPM1-207ENST00000558445 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
TRPM1-207ENST00000558445 PKHD1P08F94 4074 aa3.69□□□□□ -1.82
TRPM1-207ENST00000558445 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
TRPM1-207ENST00000558445 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
TRPM1-207ENST00000558445 RYR1P21817 5038 aa3.61□□□□□ -1.83
TRPM1-207ENST00000558445 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
TRPM1-207ENST00000558445 LRP2P98164 4655 aa3.59□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
TRPM1-207ENST00000558445 TNXBP22105 4242 aa3.54□□□□□ -1.84
TRPM1-207ENST00000558445 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
TRPM1-207ENST00000558445 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
TRPM1-207ENST00000558445 MT3P25713 68 aa3.47□□□□□ -1.85
TRPM1-207ENST00000558445 RYR2Q92736 4967 aa3.47□□□□□ -1.85
TRPM1-207ENST00000558445 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
TRPM1-207ENST00000558445 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
TRPM1-207ENST00000558445 MT1XP80297 61 aa3.45□□□□□ -1.86
TRPM1-207ENST00000558445 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
TRPM1-207ENST00000558445 HERC1Q15751 4861 aa3.41□□□□□ -1.86
TRPM1-207ENST00000558445 HERC2O95714 4834 aa3.4□□□□□ -1.86
TRPM1-207ENST00000558445 LPAP08519 4548 aa3.39□□□□□ -1.87
TRPM1-207ENST00000558445 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
TRPM1-207ENST00000558445 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
TRPM1-207ENST00000558445 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
TRPM1-207ENST00000558445 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
TRPM1-207ENST00000558445 MT2AP02795 61 aa3.35□□□□□ -1.87
TRPM1-207ENST00000558445 MT1FP04733 61 aa3.34□□□□□ -1.88
TRPM1-207ENST00000558445 MUC2Q02817 5179 aa3.33□□□□□ -1.88
TRPM1-207ENST00000558445 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
TRPM1-207ENST00000558445 MT1BP07438 61 aa3.31□□□□□ -1.88
TRPM1-207ENST00000558445 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
TRPM1-207ENST00000558445 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
TRPM1-207ENST00000558445 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
TRPM1-207ENST00000558445 BIRC6Q9NR09 4857 aa3.23□□□□□ -1.89
TRPM1-207ENST00000558445 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
TRPM1-207ENST00000558445 PRM1P04553 51 aa3.22□□□□□ -1.89
TRPM1-207ENST00000558445 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TRPM1-207ENST00000558445 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
TRPM1-207ENST00000558445 MT1HP80294 61 aa3.2□□□□□ -1.9
TRPM1-207ENST00000558445 LCE3BQ5TA77 95 aa3.13□□□□□ -1.91
TRPM1-207ENST00000558445 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
TRPM1-207ENST00000558445 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
TRPM1-207ENST00000558445 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
TRPM1-207ENST00000558445 LCE2CQ5TA81 110 aa3.12□□□□□ -1.91
TRPM1-207ENST00000558445 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
TRPM1-207ENST00000558445 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
TRPM1-207ENST00000558445 MT1LQ93083 61 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms