RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
AP4E1-202ENST00000558439 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
AP4E1-202ENST00000558439 DYNC2H1Q8NCM8 4307 aaKnown RBP7.79□□□□□ -1.16
AP4E1-202ENST00000558439 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
AP4E1-202ENST00000558439 DYNC1H1Q14204 4646 aaKnown RBP7.74□□□□□ -1.17
AP4E1-202ENST00000558439 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
AP4E1-202ENST00000558439 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
AP4E1-202ENST00000558439 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
AP4E1-202ENST00000558439 M0R2T5 61 aa7.69□□□□□ -1.18
AP4E1-202ENST00000558439 ALMS1Q8TCU4 4167 aa7.66□□□□□ -1.18
AP4E1-202ENST00000558439 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
AP4E1-202ENST00000558439 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
AP4E1-202ENST00000558439 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
AP4E1-202ENST00000558439 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
AP4E1-202ENST00000558439 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
AP4E1-202ENST00000558439 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
AP4E1-202ENST00000558439 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
AP4E1-202ENST00000558439 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
AP4E1-202ENST00000558439 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
AP4E1-202ENST00000558439 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
AP4E1-202ENST00000558439 SACSQ9NZJ4 4579 aa7.51□□□□□ -1.21
AP4E1-202ENST00000558439 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
AP4E1-202ENST00000558439 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
AP4E1-202ENST00000558439 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
AP4E1-202ENST00000558439 APOBP04114 4563 aaKnown RBP7.43□□□□□ -1.22
AP4E1-202ENST00000558439 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
AP4E1-202ENST00000558439 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
AP4E1-202ENST00000558439 RYR1P21817 5038 aa7.37□□□□□ -1.23
AP4E1-202ENST00000558439 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
AP4E1-202ENST00000558439 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
AP4E1-202ENST00000558439 PKD1P98161 4303 aa7.32□□□□□ -1.24
AP4E1-202ENST00000558439 RYR3Q15413 4870 aa7.27□□□□□ -1.25
AP4E1-202ENST00000558439 KRTAP17-1Q9BYP8 105 aa7.26□□□□□ -1.25
AP4E1-202ENST00000558439 TNP1P09430 55 aa7.25□□□□□ -1.25
AP4E1-202ENST00000558439 KMT2CQ8NEZ4 4911 aaKnown RBP7.22□□□□□ -1.25
AP4E1-202ENST00000558439 RYR2Q92736 4967 aa7.19□□□□□ -1.26
AP4E1-202ENST00000558439 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
AP4E1-202ENST00000558439 LRP2P98164 4655 aa7.12□□□□□ -1.27
AP4E1-202ENST00000558439 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
AP4E1-202ENST00000558439 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
AP4E1-202ENST00000558439 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
AP4E1-202ENST00000558439 HSPG2P98160 4391 aa7.02□□□□□ -1.29
AP4E1-202ENST00000558439 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
AP4E1-202ENST00000558439 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
AP4E1-202ENST00000558439 LPAP08519 4548 aa6.89□□□□□ -1.31
AP4E1-202ENST00000558439 TNXBP22105 4242 aa6.83□□□□□ -1.32
AP4E1-202ENST00000558439 HERC2O95714 4834 aa6.78□□□□□ -1.32
AP4E1-202ENST00000558439 EPPK1P58107 5090 aaKnown RBP6.74□□□□□ -1.33
AP4E1-202ENST00000558439 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
AP4E1-202ENST00000558439 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
AP4E1-202ENST00000558439 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
AP4E1-202ENST00000558439 MUC2Q02817 5179 aa6.47□□□□□ -1.37
AP4E1-202ENST00000558439 MT1HP80294 61 aa6.43□□□□□ -1.38
AP4E1-202ENST00000558439 MT2AP02795 61 aa6.37□□□□□ -1.39
AP4E1-202ENST00000558439 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
AP4E1-202ENST00000558439 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
AP4E1-202ENST00000558439 MT1FP04733 61 aa6.35□□□□□ -1.39
AP4E1-202ENST00000558439 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
AP4E1-202ENST00000558439 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
AP4E1-202ENST00000558439 BIRC6Q9NR09 4857 aa6.32□□□□□ -1.4
AP4E1-202ENST00000558439 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
AP4E1-202ENST00000558439 HERC1Q15751 4861 aa6.29□□□□□ -1.4
AP4E1-202ENST00000558439 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
AP4E1-202ENST00000558439 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
AP4E1-202ENST00000558439 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
AP4E1-202ENST00000558439 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
AP4E1-202ENST00000558439 RNF213Q63HN8 5207 aa6.21□□□□□ -1.42
AP4E1-202ENST00000558439 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
AP4E1-202ENST00000558439 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
AP4E1-202ENST00000558439 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
AP4E1-202ENST00000558439 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
AP4E1-202ENST00000558439 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
AP4E1-202ENST00000558439 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
AP4E1-202ENST00000558439 MT1BP07438 61 aa5.99□□□□□ -1.45
AP4E1-202ENST00000558439 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
AP4E1-202ENST00000558439 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
AP4E1-202ENST00000558439 MT1XP80297 61 aa5.97□□□□□ -1.45
AP4E1-202ENST00000558439 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
AP4E1-202ENST00000558439 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
AP4E1-202ENST00000558439 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
AP4E1-202ENST00000558439 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
AP4E1-202ENST00000558439 INE1O15225 51 aa5.81□□□□□ -1.48
AP4E1-202ENST00000558439 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
AP4E1-202ENST00000558439 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
AP4E1-202ENST00000558439 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
AP4E1-202ENST00000558439 FSIP2Q5CZC0 6907 aa5.72□□□□□ -1.49
AP4E1-202ENST00000558439 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
AP4E1-202ENST00000558439 LCE2BO14633 110 aa5.67□□□□□ -1.5
AP4E1-202ENST00000558439 USH2AO75445 5202 aa5.53□□□□□ -1.52
AP4E1-202ENST00000558439 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
AP4E1-202ENST00000558439 KMT2DO14686 5537 aa5.43□□□□□ -1.54
AP4E1-202ENST00000558439 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
AP4E1-202ENST00000558439 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
AP4E1-202ENST00000558439 MT1GP13640 62 aa5.25□□□□□ -1.57
AP4E1-202ENST00000558439 MT1LQ93083 61 aa5.24□□□□□ -1.57
AP4E1-202ENST00000558439 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
AP4E1-202ENST00000558439 MT1EP04732 61 aa5.22□□□□□ -1.57
AP4E1-202ENST00000558439 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
AP4E1-202ENST00000558439 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
AP4E1-202ENST00000558439 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms