RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 MUSTN1Q8IVN3 82 aa1.95□□□□□ -2.1
LRRC28-205ENST00000558248 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 MGPP08493 103 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 SPINK6Q6UWN8 80 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 UNQ6190/PRO20217Q6UXQ8 127 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 Q6ZQY7 126 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
LRRC28-205ENST00000558248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.93□□□□□ -2.1
LRRC28-205ENST00000558248 A0A087WWC5 75 aa1.93□□□□□ -2.1
LRRC28-205ENST00000558248 SPINK4O60575 86 aa1.93□□□□□ -2.1
LRRC28-205ENST00000558248 IGKV4-1P06312 121 aa1.93□□□□□ -2.1
LRRC28-205ENST00000558248 PRR15LQ9BU68 103 aa1.93□□□□□ -2.1
LRRC28-205ENST00000558248 M0R3E3 92 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 SFTA3P0C7M3 94 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 ARL14EPLP0DKL9 152 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 GCHFRP30047 84 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 SERF2P84101 59 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 GNG13Q9P2W3 67 aa1.92□□□□□ -2.1
LRRC28-205ENST00000558248 COX17Q14061 63 aa1.91□□□□□ -2.1
LRRC28-205ENST00000558248 Q96NJ1 140 aa1.91□□□□□ -2.1
LRRC28-205ENST00000558248 TMEM167BQ9NRX6 74 aa1.91□□□□□ -2.1
LRRC28-205ENST00000558248 SPRR4Q96PI1 79 aa1.9□□□□□ -2.11
LRRC28-205ENST00000558248 PLAC8Q9NZF1 115 aa1.9□□□□□ -2.11
LRRC28-205ENST00000558248 OBSCN-AS1Q96MR7 158 aa1.89□□□□□ -2.11
LRRC28-205ENST00000558248 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
LRRC28-205ENST00000558248 ACYP2P14621 99 aa1.88□□□□□ -2.11
LRRC28-205ENST00000558248 MT1HP80294 61 aa1.88□□□□□ -2.11
LRRC28-205ENST00000558248 Q6JHZ5 121 aa1.88□□□□□ -2.11
LRRC28-205ENST00000558248 ZCCHC13Q8WW36 166 aaKnown RBP1.88□□□□□ -2.11
LRRC28-205ENST00000558248 TRAV21A0A0B4J279 112 aa1.87□□□□□ -2.11
LRRC28-205ENST00000558248 TRBV30A0A0K0K1B3 111 aa1.87□□□□□ -2.11
LRRC28-205ENST00000558248 ATP5EP2Q5VTU8 51 aa1.87□□□□□ -2.11
LRRC28-205ENST00000558248 UBE2D4Q9Y2X8 147 aa1.87□□□□□ -2.11
LRRC28-205ENST00000558248 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
LRRC28-205ENST00000558248 IFI27P40305 119 aaPredicted RBP1.86□□□□□ -2.11
LRRC28-205ENST00000558248 COX6A2Q02221 97 aa1.86□□□□□ -2.11
LRRC28-205ENST00000558248 ENHOQ6UWT2 76 aa1.86□□□□□ -2.11
LRRC28-205ENST00000558248 A0A087WVE0 104 aa1.85□□□□□ -2.11
LRRC28-205ENST00000558248 H3BVH4 76 aa1.85□□□□□ -2.11
LRRC28-205ENST00000558248 COX8AP10176 69 aa1.85□□□□□ -2.11
LRRC28-205ENST00000558248 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
LRRC28-205ENST00000558248 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
LRRC28-205ENST00000558248 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 NCR3O14931 201 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 CRIP1P50238 77 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 LINC00472Q9H8W2 130 aa1.84□□□□□ -2.11
LRRC28-205ENST00000558248 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
LRRC28-205ENST00000558248 A0A1B0GUT8 65 aa1.83□□□□□ -2.12
LRRC28-205ENST00000558248 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
LRRC28-205ENST00000558248 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
LRRC28-205ENST00000558248 LINC00575Q6W349 94 aa1.83□□□□□ -2.12
LRRC28-205ENST00000558248 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
LRRC28-205ENST00000558248 A0A096LNI7 61 aa1.82□□□□□ -2.12
LRRC28-205ENST00000558248 H0Y9P7 68 aa1.82□□□□□ -2.12
LRRC28-205ENST00000558248 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
LRRC28-205ENST00000558248 MUC17Q685J3 4493 aa1.81□□□□□ -2.12
LRRC28-205ENST00000558248 M0R2T5 61 aa1.81□□□□□ -2.12
LRRC28-205ENST00000558248 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
LRRC28-205ENST00000558248 Q6ZRX8 168 aa1.81□□□□□ -2.12
LRRC28-205ENST00000558248 SMIM11BQ8TCY0 68 aa1.81□□□□□ -2.12
LRRC28-205ENST00000558248 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
LRRC28-205ENST00000558248 TRBV7-4A0A0J9YYF1 115 aa1.8□□□□□ -2.12
LRRC28-205ENST00000558248 SMIM27A0A1W2PRY6 76 aa1.8□□□□□ -2.12
LRRC28-205ENST00000558248 NDUFB1O75438 58 aa1.8□□□□□ -2.12
LRRC28-205ENST00000558248 CLPSL2Q6UWE3 100 aa1.8□□□□□ -2.12
LRRC28-205ENST00000558248 RPL39LQ96EH5 51 aaKnown RBP1.79□□□□□ -2.12
LRRC28-205ENST00000558248 GVQW2A0A096LPI5 108 aaPredicted RBP1.78□□□□□ -2.12
LRRC28-205ENST00000558248 M0QY20 66 aa1.78□□□□□ -2.12
LRRC28-205ENST00000558248 FCER1GP30273 86 aa1.78□□□□□ -2.12
LRRC28-205ENST00000558248 SPINK7P58062 85 aa1.78□□□□□ -2.12
LRRC28-205ENST00000558248 CNFNQ9BYD5 112 aa1.78□□□□□ -2.12
LRRC28-205ENST00000558248 USH2AO75445 5202 aa1.78□□□□□ -2.12
LRRC28-205ENST00000558248 I3L3M4 83 aa1.77□□□□□ -2.13
LRRC28-205ENST00000558248 C3orf79P0CE67 100 aa1.77□□□□□ -2.13
LRRC28-205ENST00000558248 ATXN8Q156A1 80 aa1.77□□□□□ -2.13
LRRC28-205ENST00000558248 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
LRRC28-205ENST00000558248 SMIM2Q9BVW6 85 aa1.76□□□□□ -2.13
LRRC28-205ENST00000558248 NEBP20929 6669 aa1.76□□□□□ -2.13
LRRC28-205ENST00000558248 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
LRRC28-205ENST00000558248 POLR2KP53803 58 aaKnown RBP1.74□□□□□ -2.13
LRRC28-205ENST00000558248 RPL39P62891 51 aaKnown RBP1.74□□□□□ -2.13
LRRC28-205ENST00000558248 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
LRRC28-205ENST00000558248 A0A1B0GU69 56 aa1.72□□□□□ -2.13
LRRC28-205ENST00000558248 LINC00959A0A1B0GUT2 108 aa1.72□□□□□ -2.13
LRRC28-205ENST00000558248 K7EMI3 77 aa1.72□□□□□ -2.13
LRRC28-205ENST00000558248 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
LRRC28-205ENST00000558248 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 IGIPA6NJ69 53 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 COX6B2Q6YFQ2 88 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 TOMM7Q9P0U1 55 aa1.71□□□□□ -2.14
LRRC28-205ENST00000558248 LINC01546A6NGU7 62 aa1.7□□□□□ -2.14
LRRC28-205ENST00000558248 CDKN2A-AS1Q9UH64 79 aa1.7□□□□□ -2.14
LRRC28-205ENST00000558248 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
LRRC28-205ENST00000558248 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms