RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 DNHD1Q96M86 4753 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 TENM2Q9NT68 2774 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 NIPBLQ6KC79 2804 aaeCLIP0.27□□□□□ -2.37
PSMA3-212ENST00000557290 CADP27708 2225 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 MYO7AQ13402 2215 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 ABCA1O95477 2261 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
PSMA3-212ENST00000557290 MUC17Q685J3 4493 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 TENM4Q6N022 2769 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 PIEZO2Q9H5I5 2752 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 PDZD2O15018 2839 aa0.27□□□□□ -2.37
PSMA3-212ENST00000557290 FLGP20930 4061 aaPredicted RBP0.27□□□□□ -2.37
PSMA3-212ENST00000557290 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 KIAA0100Q14667 2235 aaKnown RBP0.26□□□□□ -2.37
PSMA3-212ENST00000557290 URB1O60287 2271 aaKnown RBP0.26□□□□□ -2.37
PSMA3-212ENST00000557290 ABCA4P78363 2273 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 KRTAP8-1Q8IUC2 63 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 MXRA5Q9NR99 2828 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 LPAP08519 4548 aa0.26□□□□□ -2.37
PSMA3-212ENST00000557290 MAP1AP78559 2803 aaPredicted RBP0.25□□□□□ -2.37
PSMA3-212ENST00000557290 AHCTF1Q8WYP5 2266 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 MED13LQ71F56 2210 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 NF1P21359 2839 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 MEGF8Q7Z7M0 2845 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 WNK1Q9H4A3 2382 aa0.25□□□□□ -2.37
PSMA3-212ENST00000557290 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
PSMA3-212ENST00000557290 VWFP04275 2813 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
PSMA3-212ENST00000557290 ITPR1Q14643 2758 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 EP300Q09472 2414 aaPredicted RBP0.24□□□□□ -2.37
PSMA3-212ENST00000557290 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 KNL1Q8NG31 2342 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 APC2O95996 2303 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 PLCE1Q9P212 2302 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 FAT4Q6V0I7 4981 aa0.24□□□□□ -2.37
PSMA3-212ENST00000557290 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
PSMA3-212ENST00000557290 RYR1P21817 5038 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 PDE4DIPQ5VU43 2346 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 MT1EP04732 61 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 KRTAP19-2Q3LHN2 52 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 KRTAP19-8Q3LI54 63 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 TEX15Q9BXT5 2789 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 ANKRD17O75179 2603 aaKnown RBP0.23□□□□□ -2.37
PSMA3-212ENST00000557290 CREBBPQ92793 2442 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 ZANQ9Y493 2812 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 RYR2Q92736 4967 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
PSMA3-212ENST00000557290 UTP20O75691 2785 aaKnown RBP0.23□□□□□ -2.37
PSMA3-212ENST00000557290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.22□□□□□ -2.372e-6■■■■□ 24.3
PSMA3-212ENST00000557290 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 RYR3Q15413 4870 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 ANKHD1Q8IWZ3 2542 aaKnown RBP0.22□□□□□ -2.37
PSMA3-212ENST00000557290 SRRM2Q9UQ35 2752 aaKnown RBP0.22□□□□□ -2.37
PSMA3-212ENST00000557290 CNOT1A5YKK6 2376 aaKnown RBP0.22□□□□□ -2.37
PSMA3-212ENST00000557290 SPTBN2O15020 2390 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 SPTBN1Q01082 2364 aaKnown RBP0.22□□□□□ -2.37
PSMA3-212ENST00000557290 C2CD3Q4AC94 2353 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 M0R2T5 61 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 SMR3BP02814 79 aaPredicted RBP0.22□□□□□ -2.37
PSMA3-212ENST00000557290 MT1AP04731 61 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 MT1HL1P0DM35 61 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 MT1LQ93083 61 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 PTPRQQ9UMZ3 2332 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 LRP2P98164 4655 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 PKD1L1Q8TDX9 2849 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 NBEAL2Q6ZNJ1 2754 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 ZNF292O60281 2723 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
PSMA3-212ENST00000557290 NBASA2RRP1 2371 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 ZDBF2Q9HCK1 2354 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 ACACAQ13085 2346 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 CSPG4Q6UVK1 2322 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 PCNX1Q96RV3 2341 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 MYO9AB2RTY4 2548 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 MAP1BP46821 2468 aaKnown RBP0.21□□□□□ -2.38
PSMA3-212ENST00000557290 CFAP46Q8IYW2 2715 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 MT1HP80294 61 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 TPRP12270 2363 aaKnown RBP0.21□□□□□ -2.38
PSMA3-212ENST00000557290 HERC2O95714 4834 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 PIEZO1Q92508 2521 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 HERC1Q15751 4861 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 DOPEY1Q5JWR5 2465 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 CEP250Q9BV73 2442 aa0.21□□□□□ -2.38
PSMA3-212ENST00000557290 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 MT1FP04733 61 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 MT1GP13640 62 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 KRTAP19-5Q3LI72 72 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 SPTA1P02549 2419 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 ABCA2Q9BZC7 2435 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 HYDINQ4G0P3 5121 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 TGP01266 2768 aa0.2□□□□□ -2.38
PSMA3-212ENST00000557290 NCOR2Q9Y618 2525 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms