RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 A8MUU9 505 aa4.73□□□□□ -1.65
SYNE2-224ENST00000557024 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
SYNE2-224ENST00000557024 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
SYNE2-224ENST00000557024 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
SYNE2-224ENST00000557024 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
SYNE2-224ENST00000557024 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
SYNE2-224ENST00000557024 TP53AIP1Q9HCN2 124 aa4.69□□□□□ -1.66
SYNE2-224ENST00000557024 ZCCHC13Q8WW36 166 aaKnown RBP4.68□□□□□ -1.66
SYNE2-224ENST00000557024 FAM236AA0A1B0GUQ0 79 aa4.67□□□□□ -1.66
SYNE2-224ENST00000557024 FAM236BA0A1B0GV22 79 aa4.67□□□□□ -1.66
SYNE2-224ENST00000557024 UQCRQO14949 82 aa4.65□□□□□ -1.67
SYNE2-224ENST00000557024 NEBP20929 6669 aa4.63□□□□□ -1.67
SYNE2-224ENST00000557024 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
SYNE2-224ENST00000557024 FAM236DA0A1B0GTK5 79 aa4.62□□□□□ -1.67
SYNE2-224ENST00000557024 ATOX1O00244 68 aa4.62□□□□□ -1.67
SYNE2-224ENST00000557024 FAM236CP0DP71 79 aa4.62□□□□□ -1.67
SYNE2-224ENST00000557024 TRAV22A0A0B4J277 110 aa4.61□□□□□ -1.67
SYNE2-224ENST00000557024 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
SYNE2-224ENST00000557024 H0Y9P7 68 aa4.6□□□□□ -1.67
SYNE2-224ENST00000557024 MP68P56378 58 aa4.6□□□□□ -1.67
SYNE2-224ENST00000557024 Q5W150 140 aa4.6□□□□□ -1.67
SYNE2-224ENST00000557024 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
SYNE2-224ENST00000557024 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
SYNE2-224ENST00000557024 OCR1Q9BZK8 76 aa4.59□□□□□ -1.67
SYNE2-224ENST00000557024 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
SYNE2-224ENST00000557024 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
SYNE2-224ENST00000557024 SPINK7P58062 85 aa4.57□□□□□ -1.68
SYNE2-224ENST00000557024 LOC101927531A0A1B0GV80 90 aa4.56□□□□□ -1.68
SYNE2-224ENST00000557024 H3BPC8 53 aa4.55□□□□□ -1.68
SYNE2-224ENST00000557024 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
SYNE2-224ENST00000557024 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
SYNE2-224ENST00000557024 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
SYNE2-224ENST00000557024 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SYNE2-224ENST00000557024 ANAPC13Q9BS18 74 aa4.53□□□□□ -1.68
SYNE2-224ENST00000557024 RBM12B-AS1Q9P1G2 102 aa4.53□□□□□ -1.68
SYNE2-224ENST00000557024 HRES1P13985 223 aa4.51□□□□□ -1.69
SYNE2-224ENST00000557024 CYP4F30PQ9H0H9 118 aa4.51□□□□□ -1.69
SYNE2-224ENST00000557024 COX7CP15954 63 aa4.5□□□□□ -1.69
SYNE2-224ENST00000557024 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
SYNE2-224ENST00000557024 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
SYNE2-224ENST00000557024 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
SYNE2-224ENST00000557024 C4orf26Q17RF5 130 aa4.45□□□□□ -1.7
SYNE2-224ENST00000557024 KLKP1Q107X0 134 aa4.44□□□□□ -1.7
SYNE2-224ENST00000557024 NDUFC1O43677 76 aa4.4□□□□□ -1.71
SYNE2-224ENST00000557024 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
SYNE2-224ENST00000557024 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
SYNE2-224ENST00000557024 A8MUN3 132 aa4.37□□□□□ -1.71
SYNE2-224ENST00000557024 A6NN06 94 aa4.36□□□□□ -1.71
SYNE2-224ENST00000557024 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
SYNE2-224ENST00000557024 SPANXA2-OT1Q8N9U9 137 aa4.35□□□□□ -1.71
SYNE2-224ENST00000557024 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
SYNE2-224ENST00000557024 ACYP2P14621 99 aa4.34□□□□□ -1.71
SYNE2-224ENST00000557024 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
SYNE2-224ENST00000557024 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
SYNE2-224ENST00000557024 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
SYNE2-224ENST00000557024 S4R3F8 94 aa4.33□□□□□ -1.72
SYNE2-224ENST00000557024 KMT2DO14686 5537 aa4.32□□□□□ -1.72
SYNE2-224ENST00000557024 H7BZZ5 65 aa4.32□□□□□ -1.72
SYNE2-224ENST00000557024 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
SYNE2-224ENST00000557024 CHKB-CPT1BH3BT56 60 aa4.29□□□□□ -1.72
SYNE2-224ENST00000557024 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-224ENST00000557024 TMEM258P61165 79 aa4.26□□□□□ -1.73
SYNE2-224ENST00000557024 CSAG1Q6PB30 78 aa4.26□□□□□ -1.73
SYNE2-224ENST00000557024 LCA10Q71F78 164 aa4.26□□□□□ -1.73
SYNE2-224ENST00000557024 MT1BP07438 61 aa4.25□□□□□ -1.73
SYNE2-224ENST00000557024 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
SYNE2-224ENST00000557024 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
SYNE2-224ENST00000557024 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
SYNE2-224ENST00000557024 Q5VV11 94 aa4.22□□□□□ -1.73
SYNE2-224ENST00000557024 COA5Q86WW8 74 aa4.22□□□□□ -1.73
SYNE2-224ENST00000557024 SPRR2EP22531 72 aa4.19□□□□□ -1.74
SYNE2-224ENST00000557024 SPRR2BP35325 72 aa4.19□□□□□ -1.74
SYNE2-224ENST00000557024 SPRR2AP35326 72 aa4.19□□□□□ -1.74
SYNE2-224ENST00000557024 MT3P25713 68 aa4.18□□□□□ -1.74
SYNE2-224ENST00000557024 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SYNE2-224ENST00000557024 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
SYNE2-224ENST00000557024 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
SYNE2-224ENST00000557024 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
SYNE2-224ENST00000557024 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
SYNE2-224ENST00000557024 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
SYNE2-224ENST00000557024 SEC61GP60059 68 aa4.11□□□□□ -1.75
SYNE2-224ENST00000557024 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
SYNE2-224ENST00000557024 H0YAA0 97 aa4.09□□□□□ -1.75
SYNE2-224ENST00000557024 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-224ENST00000557024 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
SYNE2-224ENST00000557024 SPRR2DP22532 72 aa4.06□□□□□ -1.76
SYNE2-224ENST00000557024 A0A1B0GU69 56 aa4.03□□□□□ -1.76
SYNE2-224ENST00000557024 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
SYNE2-224ENST00000557024 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
SYNE2-224ENST00000557024 P0C880 135 aa4.01□□□□□ -1.77
SYNE2-224ENST00000557024 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
SYNE2-224ENST00000557024 V9GYY9 64 aa4.01□□□□□ -1.77
SYNE2-224ENST00000557024 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
SYNE2-224ENST00000557024 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
SYNE2-224ENST00000557024 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
SYNE2-224ENST00000557024 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
SYNE2-224ENST00000557024 R4GN34 69 aa4□□□□□ -1.77
SYNE2-224ENST00000557024 M0QZ58 72 aa3.97□□□□□ -1.77
SYNE2-224ENST00000557024 A0A1B0GU33 70 aa3.95□□□□□ -1.78
SYNE2-224ENST00000557024 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms