RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778		Q5W150	140 aa		4.46	□□□□□ -1.7
PRKCH-222	ENST00000556778	CASC2	Q6XLA1	102 aa		4.46	□□□□□ -1.7
PRKCH-222	ENST00000556778	MPLKIP	Q8TAP9	179 aa		4.44	□□□□□ -1.7
PRKCH-222	ENST00000556778	FAM236A	A0A1B0GUQ0	79 aa		4.43	□□□□□ -1.7
PRKCH-222	ENST00000556778	FAM236B	A0A1B0GV22	79 aa		4.43	□□□□□ -1.7
PRKCH-222	ENST00000556778	HCG22	E2RYF7	251 aa		4.43	□□□□□ -1.7
PRKCH-222	ENST00000556778	SMIM26	A0A096LP01	95 aa		4.42	□□□□□ -1.7
PRKCH-222	ENST00000556778		M0R2T5	61 aa		4.42	□□□□□ -1.7
PRKCH-222	ENST00000556778	COX7C	P15954	63 aa		4.42	□□□□□ -1.7
PRKCH-222	ENST00000556778	CXCL6	P80162	114 aa		4.41	□□□□□ -1.7
PRKCH-222	ENST00000556778	SERP1	Q9Y6X1	66 aa		4.41	□□□□□ -1.7
PRKCH-222	ENST00000556778	ATOX1	O00244	68 aa		4.4	□□□□□ -1.71
PRKCH-222	ENST00000556778	ACYP1	P07311	99 aa		4.4	□□□□□ -1.71
PRKCH-222	ENST00000556778	KRTAP10-6	P60371	365 aa	Predicted RBP	4.4	□□□□□ -1.71
PRKCH-222	ENST00000556778	ATP5E	P56381	51 aa	Predicted RBP	4.39	□□□□□ -1.71
PRKCH-222	ENST00000556778	IGKV2D-30	A0A075B6S6	120 aa		4.37	□□□□□ -1.71
PRKCH-222	ENST00000556778	BRK1	Q8WUW1	75 aa		4.37	□□□□□ -1.71
PRKCH-222	ENST00000556778	RBM12B-AS1	Q9P1G2	102 aa		4.37	□□□□□ -1.71
PRKCH-222	ENST00000556778		A0A087WVE0	104 aa		4.35	□□□□□ -1.71
PRKCH-222	ENST00000556778	HIST1H4A	P62805	103 aa	Known RBP	4.35	□□□□□ -1.71
PRKCH-222	ENST00000556778	KTN1-AS1	Q86SY8	53 aa		4.35	□□□□□ -1.71
PRKCH-222	ENST00000556778	LINC00643	Q86TS7	51 aa		4.34	□□□□□ -1.71
PRKCH-222	ENST00000556778	FSIP2	Q5CZC0	6907 aa		4.32	□□□□□ -1.72
PRKCH-222	ENST00000556778	ATP5EP2	Q5VTU8	51 aa		4.31	□□□□□ -1.72
PRKCH-222	ENST00000556778	C7orf65	Q6ZTY9	151 aa		4.31	□□□□□ -1.72
PRKCH-222	ENST00000556778	SERP2	Q8N6R1	65 aa		4.3	□□□□□ -1.72
PRKCH-222	ENST00000556778	TP53AIP1	Q9HCN2	124 aa		4.29	□□□□□ -1.72
PRKCH-222	ENST00000556778	NDUFC1	O43677	76 aa		4.26	□□□□□ -1.73
PRKCH-222	ENST00000556778	MT2A	P02795	61 aa		4.26	□□□□□ -1.73
PRKCH-222	ENST00000556778	H1FX-AS1	Q4G0G2	97 aa		4.26	□□□□□ -1.73
PRKCH-222	ENST00000556778	CYP4F30P	Q9H0H9	118 aa		4.25	□□□□□ -1.73
PRKCH-222	ENST00000556778	MT1F	P04733	61 aa		4.24	□□□□□ -1.73
PRKCH-222	ENST00000556778	TRAV22	A0A0B4J277	110 aa		4.23	□□□□□ -1.73
PRKCH-222	ENST00000556778	LCA10	Q71F78	164 aa		4.23	□□□□□ -1.73
PRKCH-222	ENST00000556778		H0Y9P7	68 aa		4.22	□□□□□ -1.73
PRKCH-222	ENST00000556778	C1orf64	Q8NEQ6	169 aa		4.22	□□□□□ -1.73
PRKCH-222	ENST00000556778	OCR1	Q9BZK8	76 aa		4.22	□□□□□ -1.73
PRKCH-222	ENST00000556778	KRTAP2-2	Q9BYT5	123 aa		4.21	□□□□□ -1.74
PRKCH-222	ENST00000556778	USH2A	O75445	5202 aa		4.2	□□□□□ -1.74
PRKCH-222	ENST00000556778	KRTAP10-10	P60014	251 aa		4.19	□□□□□ -1.74
PRKCH-222	ENST00000556778	LOC101927531	A0A1B0GV80	90 aa		4.18	□□□□□ -1.74
PRKCH-222	ENST00000556778	MP68	P56378	58 aa		4.18	□□□□□ -1.74
PRKCH-222	ENST00000556778	KLKP1	Q107X0	134 aa		4.18	□□□□□ -1.74
PRKCH-222	ENST00000556778	LINC00208	Q96KT6	92 aa		4.18	□□□□□ -1.74
PRKCH-222	ENST00000556778		A8MUN3	132 aa		4.17	□□□□□ -1.74
PRKCH-222	ENST00000556778	PSPHP1	O15172	72 aa		4.16	□□□□□ -1.74
PRKCH-222	ENST00000556778	CRCT1	Q9UGL9	99 aa		4.14	□□□□□ -1.75
PRKCH-222	ENST00000556778		S4R3F8	94 aa		4.13	□□□□□ -1.75
PRKCH-222	ENST00000556778	SSPO	A2VEC9	5147 aa		4.13	□□□□□ -1.75
PRKCH-222	ENST00000556778		H7BZZ5	65 aa		4.12	□□□□□ -1.75
PRKCH-222	ENST00000556778		Q1T7F1	81 aa		4.12	□□□□□ -1.75
PRKCH-222	ENST00000556778	CYSTM1	Q9H1C7	97 aa		4.09	□□□□□ -1.75
PRKCH-222	ENST00000556778	LINC01554	Q52M75	96 aa		4.08	□□□□□ -1.76
PRKCH-222	ENST00000556778	CSAG1	Q6PB30	78 aa		4.08	□□□□□ -1.76
PRKCH-222	ENST00000556778	TRAV7	A0A075B6U4	112 aa		4.07	□□□□□ -1.76
PRKCH-222	ENST00000556778		A6NN06	94 aa		4.04	□□□□□ -1.76
PRKCH-222	ENST00000556778		H3BPC8	53 aa		4.04	□□□□□ -1.76
PRKCH-222	ENST00000556778	C20orf197	Q8N268	126 aa		4.03	□□□□□ -1.76
PRKCH-222	ENST00000556778	SNURF	Q9Y675	71 aa		4.02	□□□□□ -1.77
PRKCH-222	ENST00000556778	DMAC1	Q96GE9	116 aa		3.99	□□□□□ -1.77
PRKCH-222	ENST00000556778	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKCH-222	ENST00000556778	KRTAP10-7	P60409	375 aa	Predicted RBP	3.96	□□□□□ -1.78
PRKCH-222	ENST00000556778	MT3	P25713	68 aa		3.95	□□□□□ -1.78
PRKCH-222	ENST00000556778	ADM2	Q7Z4H4	148 aa		3.95	□□□□□ -1.78
PRKCH-222	ENST00000556778	SPRR2G	Q9BYE4	73 aa		3.94	□□□□□ -1.78
PRKCH-222	ENST00000556778	CDC42SE1	Q9NRR8	79 aa		3.94	□□□□□ -1.78
PRKCH-222	ENST00000556778	MT1B	P07438	61 aa		3.92	□□□□□ -1.78
PRKCH-222	ENST00000556778	MACF1	Q9UPN3	7388 aa	Known RBP	3.92	□□□□□ -1.78
PRKCH-222	ENST00000556778		H0YAA0	97 aa		3.91	□□□□□ -1.78
PRKCH-222	ENST00000556778	ACYP2	P14621	99 aa		3.91	□□□□□ -1.78
PRKCH-222	ENST00000556778	KRTAP19-6	Q3LI70	58 aa		3.91	□□□□□ -1.78
PRKCH-222	ENST00000556778		P0C880	135 aa		3.9	□□□□□ -1.79
PRKCH-222	ENST00000556778	SYNE2	Q8WXH0	6885 aa	Known RBP	3.9	□□□□□ -1.79
PRKCH-222	ENST00000556778	KRTAP19-8	Q3LI54	63 aa		3.89	□□□□□ -1.79
PRKCH-222	ENST00000556778	KRTAP5-11	Q6L8G4	156 aa		3.89	□□□□□ -1.79
PRKCH-222	ENST00000556778		Q5VV11	94 aa		3.88	□□□□□ -1.79
PRKCH-222	ENST00000556778	SPTSSB	Q8NFR3	76 aa		3.88	□□□□□ -1.79
PRKCH-222	ENST00000556778	CHKB-CPT1B	H3BT56	60 aa		3.86	□□□□□ -1.79
PRKCH-222	ENST00000556778	SPANXA2-OT1	Q8N9U9	137 aa		3.86	□□□□□ -1.79
PRKCH-222	ENST00000556778	CRIPT	Q9P021	101 aa		3.86	□□□□□ -1.79
PRKCH-222	ENST00000556778		A6NED7	52 aa		3.82	□□□□□ -1.8
PRKCH-222	ENST00000556778	LCE1E	Q5T753	118 aa		3.82	□□□□□ -1.8
PRKCH-222	ENST00000556778	PRAC1	Q96KF2	57 aa		3.8	□□□□□ -1.8
PRKCH-222	ENST00000556778		M0QZ58	72 aa		3.79	□□□□□ -1.8
PRKCH-222	ENST00000556778	COA5	Q86WW8	74 aa		3.79	□□□□□ -1.8
PRKCH-222	ENST00000556778		K7ERS5	55 aa		3.78	□□□□□ -1.8
PRKCH-222	ENST00000556778	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.78	□□□□□ -1.8
PRKCH-222	ENST00000556778		R4GN34	69 aa		3.78	□□□□□ -1.8
PRKCH-222	ENST00000556778	KRTAP10-5	P60370	271 aa		3.77	□□□□□ -1.81
PRKCH-222	ENST00000556778	ROMO1	P60602	79 aa		3.76	□□□□□ -1.81
PRKCH-222	ENST00000556778	PRR15L	Q9BU68	103 aa		3.74	□□□□□ -1.81
PRKCH-222	ENST00000556778	KRTAP13-4	Q3LI77	160 aa		3.72	□□□□□ -1.81
PRKCH-222	ENST00000556778	MT1X	P80297	61 aa		3.71	□□□□□ -1.82
PRKCH-222	ENST00000556778	PLAC4	Q8WY50	150 aa		3.71	□□□□□ -1.82
PRKCH-222	ENST00000556778	LUZP6	Q538Z0	58 aa		3.69	□□□□□ -1.82
PRKCH-222	ENST00000556778	LINC01558	Q9Y6Z2	57 aa		3.68	□□□□□ -1.82
PRKCH-222	ENST00000556778		A8MU10	97 aa		3.67	□□□□□ -1.82
PRKCH-222	ENST00000556778	LCE1F	Q5T754	118 aa		3.66	□□□□□ -1.82
PRKCH-222	ENST00000556778	CAMK2N1	Q7Z7J9	78 aa		3.66	□□□□□ -1.82
PRKCH-222	ENST00000556778	MIR22HG	Q0VDD5	57 aa		3.65	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms