RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 IMUPQ9GZP8 106 aa4.71□□□□□ -1.66
SPTLC2-205ENST00000556607 A0A087WVE0 104 aa4.7□□□□□ -1.66
SPTLC2-205ENST00000556607 ACYP1P07311 99 aa4.69□□□□□ -1.66
SPTLC2-205ENST00000556607 H0Y9P7 68 aa4.67□□□□□ -1.66
SPTLC2-205ENST00000556607 UQCRQO14949 82 aa4.66□□□□□ -1.66
SPTLC2-205ENST00000556607 NDUFC1O43677 76 aa4.66□□□□□ -1.66
SPTLC2-205ENST00000556607 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
SPTLC2-205ENST00000556607 ATOX1O00244 68 aa4.65□□□□□ -1.67
SPTLC2-205ENST00000556607 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
SPTLC2-205ENST00000556607 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
SPTLC2-205ENST00000556607 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
SPTLC2-205ENST00000556607 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
SPTLC2-205ENST00000556607 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
SPTLC2-205ENST00000556607 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
SPTLC2-205ENST00000556607 A8MUN3 132 aa4.57□□□□□ -1.68
SPTLC2-205ENST00000556607 H0YAA0 97 aa4.57□□□□□ -1.68
SPTLC2-205ENST00000556607 MP68P56378 58 aa4.56□□□□□ -1.68
SPTLC2-205ENST00000556607 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
SPTLC2-205ENST00000556607 NEBP20929 6669 aa4.56□□□□□ -1.68
SPTLC2-205ENST00000556607 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
SPTLC2-205ENST00000556607 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
SPTLC2-205ENST00000556607 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
SPTLC2-205ENST00000556607 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
SPTLC2-205ENST00000556607 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
SPTLC2-205ENST00000556607 R4GN34 69 aa4.5□□□□□ -1.69
SPTLC2-205ENST00000556607 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
SPTLC2-205ENST00000556607 C20orf197Q8N268 126 aa4.47□□□□□ -1.69
SPTLC2-205ENST00000556607 M0QZ58 72 aa4.46□□□□□ -1.7
SPTLC2-205ENST00000556607 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
SPTLC2-205ENST00000556607 A0A1B0GV90 55 aa4.44□□□□□ -1.7
SPTLC2-205ENST00000556607 H3BPC8 53 aa4.44□□□□□ -1.7
SPTLC2-205ENST00000556607 P0C880 135 aa4.44□□□□□ -1.7
SPTLC2-205ENST00000556607 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
SPTLC2-205ENST00000556607 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SPTLC2-205ENST00000556607 J3QR89 54 aa4.42□□□□□ -1.7
SPTLC2-205ENST00000556607 MT1XP80297 61 aa4.42□□□□□ -1.7
SPTLC2-205ENST00000556607 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
SPTLC2-205ENST00000556607 KMT2DO14686 5537 aa4.39□□□□□ -1.71
SPTLC2-205ENST00000556607 SPRR2EP22531 72 aa4.39□□□□□ -1.71
SPTLC2-205ENST00000556607 SPRR2BP35325 72 aa4.39□□□□□ -1.71
SPTLC2-205ENST00000556607 SPRR2AP35326 72 aa4.39□□□□□ -1.71
SPTLC2-205ENST00000556607 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
SPTLC2-205ENST00000556607 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
SPTLC2-205ENST00000556607 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
SPTLC2-205ENST00000556607 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
SPTLC2-205ENST00000556607 MT-ATP8P03928 68 aa4.34□□□□□ -1.71
SPTLC2-205ENST00000556607 ACYP2P14621 99 aa4.34□□□□□ -1.71
SPTLC2-205ENST00000556607 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
SPTLC2-205ENST00000556607 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
SPTLC2-205ENST00000556607 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
SPTLC2-205ENST00000556607 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
SPTLC2-205ENST00000556607 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
SPTLC2-205ENST00000556607 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
SPTLC2-205ENST00000556607 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
SPTLC2-205ENST00000556607 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
SPTLC2-205ENST00000556607 SPRR2DP22532 72 aa4.25□□□□□ -1.73
SPTLC2-205ENST00000556607 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
SPTLC2-205ENST00000556607 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
SPTLC2-205ENST00000556607 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
SPTLC2-205ENST00000556607 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
SPTLC2-205ENST00000556607 K7ERU9 68 aa4.19□□□□□ -1.74
SPTLC2-205ENST00000556607 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
SPTLC2-205ENST00000556607 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
SPTLC2-205ENST00000556607 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
SPTLC2-205ENST00000556607 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
SPTLC2-205ENST00000556607 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
SPTLC2-205ENST00000556607 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
SPTLC2-205ENST00000556607 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
SPTLC2-205ENST00000556607 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
SPTLC2-205ENST00000556607 SEC61GP60059 68 aa4.07□□□□□ -1.76
SPTLC2-205ENST00000556607 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
SPTLC2-205ENST00000556607 COA5Q86WW8 74 aa4.05□□□□□ -1.76
SPTLC2-205ENST00000556607 A0A0D9SG42 100 aa4.04□□□□□ -1.76
SPTLC2-205ENST00000556607 PCP4P48539 62 aa4.02□□□□□ -1.77
SPTLC2-205ENST00000556607 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
SPTLC2-205ENST00000556607 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
SPTLC2-205ENST00000556607 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
SPTLC2-205ENST00000556607 A0A1B0GU33 70 aa3.96□□□□□ -1.78
SPTLC2-205ENST00000556607 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
SPTLC2-205ENST00000556607 COX7CP15954 63 aa3.93□□□□□ -1.78
SPTLC2-205ENST00000556607 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
SPTLC2-205ENST00000556607 MT1EP04732 61 aa3.92□□□□□ -1.78
SPTLC2-205ENST00000556607 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
SPTLC2-205ENST00000556607 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
SPTLC2-205ENST00000556607 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
SPTLC2-205ENST00000556607 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
SPTLC2-205ENST00000556607 A0A1B0GU69 56 aa3.88□□□□□ -1.79
SPTLC2-205ENST00000556607 H7BZZ5 65 aa3.87□□□□□ -1.79
SPTLC2-205ENST00000556607 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
SPTLC2-205ENST00000556607 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
SPTLC2-205ENST00000556607 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
SPTLC2-205ENST00000556607 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
SPTLC2-205ENST00000556607 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
SPTLC2-205ENST00000556607 MT1GP13640 62 aa3.83□□□□□ -1.8
SPTLC2-205ENST00000556607 A8MU10 97 aa3.82□□□□□ -1.8
SPTLC2-205ENST00000556607 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
SPTLC2-205ENST00000556607 TNP1P09430 55 aa3.77□□□□□ -1.81
SPTLC2-205ENST00000556607 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
SPTLC2-205ENST00000556607 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
SPTLC2-205ENST00000556607 MT1MQ8N339 61 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms