RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 KMT2DO14686 5537 aa4.87□□□□□ -1.63
SYNE2-221ENST00000556342 MT1BP07438 61 aa4.87□□□□□ -1.63
SYNE2-221ENST00000556342 ACYP1P07311 99 aa4.85□□□□□ -1.63
SYNE2-221ENST00000556342 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
SYNE2-221ENST00000556342 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
SYNE2-221ENST00000556342 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
SYNE2-221ENST00000556342 Q5VV11 94 aa4.84□□□□□ -1.63
SYNE2-221ENST00000556342 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
SYNE2-221ENST00000556342 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
SYNE2-221ENST00000556342 A0A1B0GW54 56 aa4.83□□□□□ -1.64
SYNE2-221ENST00000556342 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
SYNE2-221ENST00000556342 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
SYNE2-221ENST00000556342 FAM236AA0A1B0GUQ0 79 aa4.81□□□□□ -1.64
SYNE2-221ENST00000556342 FAM236BA0A1B0GV22 79 aa4.81□□□□□ -1.64
SYNE2-221ENST00000556342 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
SYNE2-221ENST00000556342 LOC110117498A0A087WWA1 95 aa4.8□□□□□ -1.64
SYNE2-221ENST00000556342 NDUFS5O43920 106 aa4.8□□□□□ -1.64
SYNE2-221ENST00000556342 LINC00643Q86TS7 51 aa4.8□□□□□ -1.64
SYNE2-221ENST00000556342 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
SYNE2-221ENST00000556342 hDV103S1A0JD37 113 aa4.79□□□□□ -1.64
SYNE2-221ENST00000556342 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
SYNE2-221ENST00000556342 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
SYNE2-221ENST00000556342 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
SYNE2-221ENST00000556342 C14orf132Q9NPU4 83 aa4.78□□□□□ -1.64
SYNE2-221ENST00000556342 PDE6GP18545 87 aa4.77□□□□□ -1.65
SYNE2-221ENST00000556342 NREPQ16612 68 aa4.77□□□□□ -1.65
SYNE2-221ENST00000556342 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
SYNE2-221ENST00000556342 Q5W150 140 aa4.77□□□□□ -1.65
SYNE2-221ENST00000556342 K7EQZ3 153 aa4.76□□□□□ -1.65
SYNE2-221ENST00000556342 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
SYNE2-221ENST00000556342 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
SYNE2-221ENST00000556342 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
SYNE2-221ENST00000556342 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
SYNE2-221ENST00000556342 S4R3F8 94 aa4.71□□□□□ -1.66
SYNE2-221ENST00000556342 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
SYNE2-221ENST00000556342 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
SYNE2-221ENST00000556342 ATP5EP2Q5VTU8 51 aa4.68□□□□□ -1.66
SYNE2-221ENST00000556342 LCA10Q71F78 164 aa4.68□□□□□ -1.66
SYNE2-221ENST00000556342 HCG22E2RYF7 251 aa4.67□□□□□ -1.66
SYNE2-221ENST00000556342 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
SYNE2-221ENST00000556342 BPY2O14599 106 aa4.66□□□□□ -1.66
SYNE2-221ENST00000556342 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
SYNE2-221ENST00000556342 CXCL6P80162 114 aa4.64□□□□□ -1.67
SYNE2-221ENST00000556342 C1orf64Q8NEQ6 169 aa4.64□□□□□ -1.67
SYNE2-221ENST00000556342 A0A087WVE0 104 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 SPRR2EP22531 72 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 SPRR2BP35325 72 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 SPRR2AP35326 72 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 Q8N9L7 120 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
SYNE2-221ENST00000556342 ATOX1O00244 68 aa4.62□□□□□ -1.67
SYNE2-221ENST00000556342 COX7CP15954 63 aa4.61□□□□□ -1.67
SYNE2-221ENST00000556342 UQCRQO14949 82 aa4.6□□□□□ -1.67
SYNE2-221ENST00000556342 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
SYNE2-221ENST00000556342 CRIPTQ9P021 101 aa4.6□□□□□ -1.67
SYNE2-221ENST00000556342 SERP2Q8N6R1 65 aa4.58□□□□□ -1.68
SYNE2-221ENST00000556342 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SYNE2-221ENST00000556342 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
SYNE2-221ENST00000556342 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
SYNE2-221ENST00000556342 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
SYNE2-221ENST00000556342 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
SYNE2-221ENST00000556342 MT1XP80297 61 aa4.5□□□□□ -1.69
SYNE2-221ENST00000556342 SMIM20Q8N5G0 67 aa4.5□□□□□ -1.69
SYNE2-221ENST00000556342 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
SYNE2-221ENST00000556342 SPRR2DP22532 72 aa4.48□□□□□ -1.69
SYNE2-221ENST00000556342 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
SYNE2-221ENST00000556342 TMEM258P61165 79 aa4.46□□□□□ -1.7
SYNE2-221ENST00000556342 H0YAA0 97 aa4.45□□□□□ -1.7
SYNE2-221ENST00000556342 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
SYNE2-221ENST00000556342 A8MUN3 132 aa4.44□□□□□ -1.7
SYNE2-221ENST00000556342 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SYNE2-221ENST00000556342 H7BZZ5 65 aa4.44□□□□□ -1.7
SYNE2-221ENST00000556342 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
SYNE2-221ENST00000556342 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
SYNE2-221ENST00000556342 C20orf197Q8N268 126 aa4.43□□□□□ -1.7
SYNE2-221ENST00000556342 NDUFC1O43677 76 aa4.41□□□□□ -1.7
SYNE2-221ENST00000556342 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
SYNE2-221ENST00000556342 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
SYNE2-221ENST00000556342 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
SYNE2-221ENST00000556342 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
SYNE2-221ENST00000556342 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
SYNE2-221ENST00000556342 TRAV22A0A0B4J277 110 aa4.35□□□□□ -1.71
SYNE2-221ENST00000556342 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SYNE2-221ENST00000556342 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-221ENST00000556342 SERP1Q9Y6X1 66 aa4.32□□□□□ -1.72
SYNE2-221ENST00000556342 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
SYNE2-221ENST00000556342 R4GN34 69 aa4.31□□□□□ -1.72
SYNE2-221ENST00000556342 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SYNE2-221ENST00000556342 H3BPC8 53 aa4.29□□□□□ -1.72
SYNE2-221ENST00000556342 P0C880 135 aa4.27□□□□□ -1.73
SYNE2-221ENST00000556342 M0QZ58 72 aa4.26□□□□□ -1.73
SYNE2-221ENST00000556342 H0Y9P7 68 aa4.25□□□□□ -1.73
SYNE2-221ENST00000556342 SPANXA2-OT1Q8N9U9 137 aa4.24□□□□□ -1.73
SYNE2-221ENST00000556342 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
SYNE2-221ENST00000556342 MP68P56378 58 aa4.23□□□□□ -1.73
SYNE2-221ENST00000556342 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
SYNE2-221ENST00000556342 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
SYNE2-221ENST00000556342 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms