RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 TLN1Q9Y490 2541 aaKnown RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 MT1FP04733 61 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 MT1BP07438 61 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 KRTAP19-7Q3SYF9 63 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 USP9YO00507 2555 aaPredicted RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 STAB2Q8WWQ8 2551 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 UBR5O95071 2799 aaPredicted RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 FLNAP21333 2647 aaKnown RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 ALMS1Q8TCU4 4167 aa0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 ANKRD11Q6UB99 2663 aaPredicted RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 GCN1Q92616 2671 aaKnown RBP0.07□□□□□ -2.4
SUPT16H-206ENST00000556309 NEBP20929 6669 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 A0A0C4DFX4 3053 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 MYO9AB2RTY4 2548 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 TENM2Q9NT68 2774 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 RANBP2P49792 3224 aaKnown RBP0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 CEP295Q9C0D2 2601 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 HIVEP1P15822 2718 aa0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 TNRC18O15417 2968 aaPredicted RBP0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 SRRM2Q9UQ35 2752 aaKnown RBP0.06□□□□□ -2.4
SUPT16H-206ENST00000556309 CSMD3Q7Z407 3707 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 COL12A1Q99715 3063 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 CHD9Q3L8U1 2897 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 HRNRQ86YZ3 2850 aaPredicted RBP0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 COL6A3P12111 3177 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 TEX15Q9BXT5 2789 aa0.05□□□□□ -2.4
SUPT16H-206ENST00000556309 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 CELSR3Q9NYQ7 3312 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 TRIOO75962 3097 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 ITPR1Q14643 2758 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 NF1P21359 2839 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 PKD1L1Q8TDX9 2849 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 MT4P47944 62 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 LAMA3Q16787 3333 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 ITPR3Q14573 2671 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 CELSR1Q9NYQ6 3014 aa0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 NIPBLQ6KC79 2804 aaeCLIP0.04□□□□□ -2.4
SUPT16H-206ENST00000556309 CMYA5Q8N3K9 4069 aa0.03□□□□□ -2.4
SUPT16H-206ENST00000556309 LAMA1P25391 3075 aa0.03□□□□□ -2.4
SUPT16H-206ENST00000556309 CUBNO60494 3623 aa0.03□□□□□ -2.4
SUPT16H-206ENST00000556309 PDZD2O15018 2839 aa0.03□□□□□ -2.4
SUPT16H-206ENST00000556309 LAMA5O15230 3695 aa0.03□□□□□ -2.4
SUPT16H-206ENST00000556309 MXRA5Q9NR99 2828 aa0.03□□□□□ -2.41
SUPT16H-206ENST00000556309 HSPG2P98160 4391 aa0.03□□□□□ -2.41
SUPT16H-206ENST00000556309 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.41
SUPT16H-206ENST00000556309 CHD7Q9P2D1 2997 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 EYSQ5T1H1 3165 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 ANK2Q01484 3957 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 CSMD2Q7Z408 3487 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 MAP1AP78559 2803 aaPredicted RBP0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 SVEP1Q4LDE5 3571 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 WDR87Q6ZQQ6 2873 aa0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 PRKDCP78527 4128 aaKnown RBP0.02□□□□□ -2.41
SUPT16H-206ENST00000556309 NBEAQ8NFP9 2946 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 KALRNO60229 2985 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 MGAQ8IWI9 3026 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 FREM2Q5SZK8 3169 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 DCHS1Q96JQ0 3298 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 LPAP08519 4548 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 SZT2Q5T011 3432 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 KRTAP19-2Q3LHN2 52 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 KRTAP19-6Q3LI70 58 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 ANK3Q12955 4377 aaKnown RBP0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 CRYBG3Q68DQ2 2970 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 ATMQ13315 3056 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 LAMA2P24043 3122 aaKnown RBP0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 LOC400499M0QZD8 3231 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 XIRP2A4UGR9 3374 aa0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 FRYLO94915 3013 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 FRYQ5TBA9 3013 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 DMXL2Q8TDJ6 3036 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 DMXL1Q9Y485 3027 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 RELNP78509 3460 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 ZFHX4Q86UP3 3567 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 CSMD1Q96PZ7 3565 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 ZZEF1O43149 2961 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 FLGP20930 4061 aaPredicted RBP0□□□□□ -2.41
SUPT16H-206ENST00000556309 KMT2AQ03164 3969 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 ITPR2Q14571 2701 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 GOLGB1Q14789 3259 aaKnown RBP0□□□□□ -2.41
SUPT16H-206ENST00000556309 HERC1Q15751 4861 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 HECTD4Q9Y4D8 3996 aa0□□□□□ -2.41
SUPT16H-206ENST00000556309 KMT2CQ8NEZ4 4911 aaKnown RBP-0□□□□□ -2.41
SUPT16H-206ENST00000556309 TACC2O95359 2948 aa-0□□□□□ -2.41
SUPT16H-206ENST00000556309 DCHS2Q6V1P9 2916 aa-0□□□□□ -2.41
SUPT16H-206ENST00000556309 HMCN2Q8NDA2 5059 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 DNAH3Q8TD57 4116 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 PCNTO95613 3336 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 SPEGQ15772 3267 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 SRCAPQ6ZRS2 3230 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 C5orf42Q9H799 3197 aa-0.01□□□□□ -2.41
SUPT16H-206ENST00000556309 HTTP42858 3142 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms