RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 OTOGQ6ZRI0 2925 aa1.64□□□□□ -2.15
SPTLC2-204ENST00000556264 UBR4Q5T4S7 5183 aa1.64□□□□□ -2.15
SPTLC2-204ENST00000556264 CUBNO60494 3623 aa1.63□□□□□ -2.15
SPTLC2-204ENST00000556264 HELZ2Q9BYK8 2649 aaKnown RBP1.63□□□□□ -2.15
SPTLC2-204ENST00000556264 LY6G6CO95867 125 aa1.63□□□□□ -2.15
SPTLC2-204ENST00000556264 ASB16-AS1Q495Z4 193 aa1.63□□□□□ -2.15
SPTLC2-204ENST00000556264 A0A1B0GU69 56 aa1.62□□□□□ -2.15
SPTLC2-204ENST00000556264 RETNLBQ9BQ08 111 aa1.62□□□□□ -2.15
SPTLC2-204ENST00000556264 SPINK7P58062 85 aa1.6□□□□□ -2.15
SPTLC2-204ENST00000556264 FLNBO75369 2602 aaKnown RBP1.6□□□□□ -2.15
SPTLC2-204ENST00000556264 TENM3Q9P273 2699 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 A6NN06 94 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 UQCR11O14957 56 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 ROMO1P60602 79 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 MIR22HGQ0VDD5 57 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 DMAC1Q96GE9 116 aa1.59□□□□□ -2.15
SPTLC2-204ENST00000556264 F8P00451 2351 aa1.59□□□□□ -2.16
SPTLC2-204ENST00000556264 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 SPINK1P00995 79 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 FBN1P35555 2871 aaKnown RBP1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 DNAH3Q8TD57 4116 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 TRRAPQ9Y4A5 3859 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
SPTLC2-204ENST00000556264 STAB1Q9NY15 2570 aa1.57□□□□□ -2.16
SPTLC2-204ENST00000556264 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
SPTLC2-204ENST00000556264 SPATA8Q6RVD6 105 aa1.56□□□□□ -2.16
SPTLC2-204ENST00000556264 DNAH1Q9P2D7 4330 aa1.56□□□□□ -2.16
SPTLC2-204ENST00000556264 ANK2Q01484 3957 aa1.56□□□□□ -2.16
SPTLC2-204ENST00000556264 NOTCH1P46531 2555 aa1.55□□□□□ -2.16
SPTLC2-204ENST00000556264 NBEAL1Q6ZS30 2694 aa1.55□□□□□ -2.16
SPTLC2-204ENST00000556264 HUWE1Q7Z6Z7 4374 aaKnown RBP1.55□□□□□ -2.16
SPTLC2-204ENST00000556264 RPS29P62273 56 aaKnown RBP1.54□□□□□ -2.16
SPTLC2-204ENST00000556264 Q6ZSA8 131 aa1.54□□□□□ -2.16
SPTLC2-204ENST00000556264 COL6A5A8TX70 2615 aa1.53□□□□□ -2.16
SPTLC2-204ENST00000556264 PCLOQ9Y6V0 5065 aa1.53□□□□□ -2.16
SPTLC2-204ENST00000556264 SRRM2Q9UQ35 2752 aaKnown RBP1.53□□□□□ -2.17
SPTLC2-204ENST00000556264 DYNC2H1Q8NCM8 4307 aaKnown RBP1.52□□□□□ -2.17
SPTLC2-204ENST00000556264 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
SPTLC2-204ENST00000556264 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
SPTLC2-204ENST00000556264 TENM2Q9NT68 2774 aa1.51□□□□□ -2.17
SPTLC2-204ENST00000556264 STAB2Q8WWQ8 2551 aa1.51□□□□□ -2.17
SPTLC2-204ENST00000556264 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
SPTLC2-204ENST00000556264 SMR3BP02814 79 aaPredicted RBP1.5□□□□□ -2.17
SPTLC2-204ENST00000556264 H1FX-AS1Q4G0G2 97 aa1.5□□□□□ -2.17
SPTLC2-204ENST00000556264 CSAG1Q6PB30 78 aa1.5□□□□□ -2.17
SPTLC2-204ENST00000556264 KIAA1109Q2LD37 5005 aa1.5□□□□□ -2.17
SPTLC2-204ENST00000556264 DNAH9Q9NYC9 4486 aa1.49□□□□□ -2.17
SPTLC2-204ENST00000556264 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
SPTLC2-204ENST00000556264 COL7A1Q02388 2944 aa1.49□□□□□ -2.17
SPTLC2-204ENST00000556264 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
SPTLC2-204ENST00000556264 ALMS1Q8TCU4 4167 aa1.48□□□□□ -2.17
SPTLC2-204ENST00000556264 PLECQ15149 4684 aaKnown RBP1.48□□□□□ -2.17
SPTLC2-204ENST00000556264 COX6B2Q6YFQ2 88 aa1.48□□□□□ -2.17
SPTLC2-204ENST00000556264 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
SPTLC2-204ENST00000556264 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
SPTLC2-204ENST00000556264 MEGF8Q7Z7M0 2845 aa1.47□□□□□ -2.17
SPTLC2-204ENST00000556264 LYSTQ99698 3801 aa1.47□□□□□ -2.17
SPTLC2-204ENST00000556264 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
SPTLC2-204ENST00000556264 DNAH7Q8WXX0 4024 aa1.46□□□□□ -2.18
SPTLC2-204ENST00000556264 H0YAA0 97 aa1.46□□□□□ -2.18
SPTLC2-204ENST00000556264 INE1O15225 51 aa1.45□□□□□ -2.18
SPTLC2-204ENST00000556264 S4R3F8 94 aa1.45□□□□□ -2.18
SPTLC2-204ENST00000556264 MUC2Q02817 5179 aa1.45□□□□□ -2.18
SPTLC2-204ENST00000556264 DNAH6Q9C0G6 4158 aa1.45□□□□□ -2.18
SPTLC2-204ENST00000556264 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
SPTLC2-204ENST00000556264 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
SPTLC2-204ENST00000556264 CSMD3Q7Z407 3707 aa1.44□□□□□ -2.18
SPTLC2-204ENST00000556264 A0A0D9SG42 100 aa1.44□□□□□ -2.18
SPTLC2-204ENST00000556264 RPL37P61927 97 aaKnown RBP1.44□□□□□ -2.18
SPTLC2-204ENST00000556264 TGP01266 2768 aa1.44□□□□□ -2.18
SPTLC2-204ENST00000556264 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
SPTLC2-204ENST00000556264 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
SPTLC2-204ENST00000556264 Q5VSD8 79 aa1.42□□□□□ -2.18
SPTLC2-204ENST00000556264 CRIPTQ9P021 101 aa1.42□□□□□ -2.18
SPTLC2-204ENST00000556264 FRAS1Q86XX4 4008 aa1.42□□□□□ -2.18
SPTLC2-204ENST00000556264 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
SPTLC2-204ENST00000556264 DNAH11Q96DT5 4516 aa1.41□□□□□ -2.18
SPTLC2-204ENST00000556264 KMT2AQ03164 3969 aa1.4□□□□□ -2.19
SPTLC2-204ENST00000556264 DNAH5Q8TE73 4624 aa1.39□□□□□ -2.19
SPTLC2-204ENST00000556264 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
SPTLC2-204ENST00000556264 RYR1P21817 5038 aa1.39□□□□□ -2.19
SPTLC2-204ENST00000556264 PKD1P98161 4303 aa1.39□□□□□ -2.19
SPTLC2-204ENST00000556264 M0QZ58 72 aa1.38□□□□□ -2.19
SPTLC2-204ENST00000556264 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
SPTLC2-204ENST00000556264 LRP1BQ9NZR2 4599 aa1.38□□□□□ -2.19
SPTLC2-204ENST00000556264 VPS13BQ7Z7G8 4022 aa1.37□□□□□ -2.19
SPTLC2-204ENST00000556264 SACSQ9NZJ4 4579 aa1.37□□□□□ -2.19
SPTLC2-204ENST00000556264 DNHD1Q96M86 4753 aa1.35□□□□□ -2.19
SPTLC2-204ENST00000556264 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
SPTLC2-204ENST00000556264 C10orf95Q9H7T3 257 aa1.34□□□□□ -2.19
SPTLC2-204ENST00000556264 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
SPTLC2-204ENST00000556264 RYR2Q92736 4967 aa1.33□□□□□ -2.2
SPTLC2-204ENST00000556264 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
SPTLC2-204ENST00000556264 RYR3Q15413 4870 aa1.33□□□□□ -2.2
SPTLC2-204ENST00000556264 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
SPTLC2-204ENST00000556264 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
SPTLC2-204ENST00000556264 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
SPTLC2-204ENST00000556264 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
SPTLC2-204ENST00000556264 APOBP04114 4563 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms