RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 HIST1H2BDP58876 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST1H2BCP62807 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST2H2BEQ16778 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST1H2BHQ93079 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST1H2BNQ99877 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 HIST1H2BMQ99879 126 aa1.55□□□□□ -2.16
ATXN3-234ENST00000555958 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 Q6ZQY7 126 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 GTF2H5Q6ZYL4 71 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 SEC11CQ9BY50 192 aa1.54□□□□□ -2.16
ATXN3-234ENST00000555958 TRAV7A0A075B6U4 112 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 A0A087WSZ3 146 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 FAM236AA0A1B0GUQ0 79 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 FAM236BA0A1B0GV22 79 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 COL5A1-AS1Q5SY13 56 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 SMIM11BQ8TCY0 68 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 COPS9Q8WXC6 57 aa1.53□□□□□ -2.16
ATXN3-234ENST00000555958 TRBV7-6A0A0J9YX20 115 aa1.52□□□□□ -2.17
ATXN3-234ENST00000555958 TRGC2P03986 189 aa1.52□□□□□ -2.17
ATXN3-234ENST00000555958 FABP4P15090 132 aa1.52□□□□□ -2.17
ATXN3-234ENST00000555958 Q6JHZ5 121 aa1.52□□□□□ -2.17
ATXN3-234ENST00000555958 PRR15Q8IV56 129 aa1.52□□□□□ -2.17
ATXN3-234ENST00000555958 TRAV13-2A0A0B4J235 113 aa1.51□□□□□ -2.17
ATXN3-234ENST00000555958 IGKCP01834 107 aa1.51□□□□□ -2.17
ATXN3-234ENST00000555958 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
ATXN3-234ENST00000555958 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 FABP2P12104 132 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 FXYD2P54710 66 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 RBM3P98179 157 aaKnown RBP1.5□□□□□ -2.17
ATXN3-234ENST00000555958 H1FX-AS1Q4G0G2 97 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 LCA10Q71F78 164 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 MUSTN1Q8IVN3 82 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 SNHG12Q9BXW3 62 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
ATXN3-234ENST00000555958 NHP2Q9NX24 153 aaKnown RBP1.5□□□□□ -2.17
ATXN3-234ENST00000555958 hADV29S1A0JD25 119 aa1.49□□□□□ -2.17
ATXN3-234ENST00000555958 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
ATXN3-234ENST00000555958 PLNP26678 52 aa1.49□□□□□ -2.17
ATXN3-234ENST00000555958 BRK1Q8WUW1 75 aa1.49□□□□□ -2.17
ATXN3-234ENST00000555958 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
ATXN3-234ENST00000555958 HIST1H2BKO60814 126 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 TIMM17BO60830 172 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 LEPROTL1O95214 131 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 HIST1H2BJP06899 126 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 HSD52Q0P140 79 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 LINC01545Q5VT33 79 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 TEN1Q86WV5 123 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 SVBPQ8N300 66 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 RAB37Q96AX2 223 aa1.48□□□□□ -2.17
ATXN3-234ENST00000555958 CHCHD1Q96BP2 118 aaKnown RBP1.48□□□□□ -2.17
ATXN3-234ENST00000555958 H3BMG7 143 aa1.47□□□□□ -2.17
ATXN3-234ENST00000555958 C3orf79P0CE67 100 aa1.47□□□□□ -2.17
ATXN3-234ENST00000555958 MT4P47944 62 aa1.47□□□□□ -2.17
ATXN3-234ENST00000555958 HIST3H2BBQ8N257 126 aa1.47□□□□□ -2.17
ATXN3-234ENST00000555958 HIST1H2BLQ99880 126 aa1.47□□□□□ -2.17
ATXN3-234ENST00000555958 TMEM256-PLSCR3K7ERE1 68 aa1.46□□□□□ -2.18
ATXN3-234ENST00000555958 UQCRQO14949 82 aa1.46□□□□□ -2.18
ATXN3-234ENST00000555958 IFITM1P13164 125 aa1.46□□□□□ -2.18
ATXN3-234ENST00000555958 MT1XP80297 61 aa1.46□□□□□ -2.18
ATXN3-234ENST00000555958 LINC01554Q52M75 96 aa1.46□□□□□ -2.18
ATXN3-234ENST00000555958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.46□□□□□ -2.18
ATXN3-234ENST00000555958 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
ATXN3-234ENST00000555958 LINC00472Q9H8W2 130 aa1.45□□□□□ -2.18
ATXN3-234ENST00000555958 PYY3Q5JQD4 70 aa1.44□□□□□ -2.18
ATXN3-234ENST00000555958 VAMP8Q9BV40 100 aa1.44□□□□□ -2.18
ATXN3-234ENST00000555958 SYS1-DBNDD2H3BUS1 97 aa1.43□□□□□ -2.18
ATXN3-234ENST00000555958 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
ATXN3-234ENST00000555958 SERP1Q9Y6X1 66 aa1.43□□□□□ -2.18
ATXN3-234ENST00000555958 IGKV3D-7A0A0C4DH55 119 aa1.42□□□□□ -2.18
ATXN3-234ENST00000555958 CCDC179H3BU77 68 aa1.42□□□□□ -2.18
ATXN3-234ENST00000555958 TRACP01848 142 aa1.42□□□□□ -2.18
ATXN3-234ENST00000555958 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
ATXN3-234ENST00000555958 CLLU1Q5K131 121 aa1.42□□□□□ -2.18
ATXN3-234ENST00000555958 COA5Q86WW8 74 aa1.42□□□□□ -2.18
ATXN3-234ENST00000555958 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
ATXN3-234ENST00000555958 K7ERJ3 54 aa1.41□□□□□ -2.18
ATXN3-234ENST00000555958 SNCGO76070 127 aa1.41□□□□□ -2.18
ATXN3-234ENST00000555958 APOC3P02656 99 aa1.41□□□□□ -2.18
ATXN3-234ENST00000555958 PPDPFLQ8WWR9 84 aa1.41□□□□□ -2.18
ATXN3-234ENST00000555958 S4R3F8 94 aa1.41□□□□□ -2.18
ATXN3-234ENST00000555958 TRBV7-4A0A0J9YYF1 115 aa1.4□□□□□ -2.19
ATXN3-234ENST00000555958 CCKP06307 115 aa1.4□□□□□ -2.19
ATXN3-234ENST00000555958 A0A087WVE0 104 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 KRTDAPP60985 99 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 Q1T7F1 81 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 BVES-AS1Q5T3Y7 98 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 Q6ZQT0 140 aa1.39□□□□□ -2.19
ATXN3-234ENST00000555958 F8W1H4 67 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 K7EP34 96 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 COX7CP15954 63 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 DSCR8Q96T75 97 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 C14orf132Q9NPU4 83 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 UQCR10Q9UDW1 63 aa1.38□□□□□ -2.19
ATXN3-234ENST00000555958 hDV103S1A0JD37 113 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms