RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 S4R3F8 94 aa3.97□□□□□ -1.77
CHD8-209ENST00000555935 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
CHD8-209ENST00000555935 NDUFAF8A1L188 74 aa3.96□□□□□ -1.77
CHD8-209ENST00000555935 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
CHD8-209ENST00000555935 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
CHD8-209ENST00000555935 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
CHD8-209ENST00000555935 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
CHD8-209ENST00000555935 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
CHD8-209ENST00000555935 XP32Q5T750 250 aa3.9□□□□□ -1.79
CHD8-209ENST00000555935 PKHD1P08F94 4074 aa3.89□□□□□ -1.79
CHD8-209ENST00000555935 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
CHD8-209ENST00000555935 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
CHD8-209ENST00000555935 APOBP04114 4563 aaKnown RBP3.87□□□□□ -1.79
CHD8-209ENST00000555935 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
CHD8-209ENST00000555935 M0QZ58 72 aa3.87□□□□□ -1.79
CHD8-209ENST00000555935 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
CHD8-209ENST00000555935 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
CHD8-209ENST00000555935 FAT1Q14517 4588 aa3.8□□□□□ -1.8
CHD8-209ENST00000555935 FAT3Q8TDW7 4589 aa3.79□□□□□ -1.8
CHD8-209ENST00000555935 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
CHD8-209ENST00000555935 LCE2BO14633 110 aa3.77□□□□□ -1.81
CHD8-209ENST00000555935 TNXBP22105 4242 aa3.75□□□□□ -1.81
CHD8-209ENST00000555935 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
CHD8-209ENST00000555935 HSPG2P98160 4391 aa3.72□□□□□ -1.81
CHD8-209ENST00000555935 R4GN34 69 aa3.69□□□□□ -1.82
CHD8-209ENST00000555935 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
CHD8-209ENST00000555935 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
CHD8-209ENST00000555935 Q5VSD8 79 aa3.66□□□□□ -1.82
CHD8-209ENST00000555935 PP632Q6XCG6 107 aa3.65□□□□□ -1.82
CHD8-209ENST00000555935 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
CHD8-209ENST00000555935 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
CHD8-209ENST00000555935 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
CHD8-209ENST00000555935 J3QL48 77 aa3.59□□□□□ -1.83
CHD8-209ENST00000555935 RYR2Q92736 4967 aa3.59□□□□□ -1.83
CHD8-209ENST00000555935 RYR3Q15413 4870 aa3.58□□□□□ -1.84
CHD8-209ENST00000555935 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
CHD8-209ENST00000555935 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
CHD8-209ENST00000555935 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
CHD8-209ENST00000555935 LPAP08519 4548 aa3.53□□□□□ -1.84
CHD8-209ENST00000555935 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
CHD8-209ENST00000555935 LRP2P98164 4655 aa3.51□□□□□ -1.85
CHD8-209ENST00000555935 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
CHD8-209ENST00000555935 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
CHD8-209ENST00000555935 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
CHD8-209ENST00000555935 RYR1P21817 5038 aa3.48□□□□□ -1.85
CHD8-209ENST00000555935 KRTAP17-1Q9BYP8 105 aa3.47□□□□□ -1.85
CHD8-209ENST00000555935 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CHD8-209ENST00000555935 TNP1P09430 55 aa3.45□□□□□ -1.86
CHD8-209ENST00000555935 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
CHD8-209ENST00000555935 HERC2O95714 4834 aa3.42□□□□□ -1.86
CHD8-209ENST00000555935 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
CHD8-209ENST00000555935 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
CHD8-209ENST00000555935 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
CHD8-209ENST00000555935 KIAA1109Q2LD37 5005 aa3.34□□□□□ -1.87
CHD8-209ENST00000555935 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
CHD8-209ENST00000555935 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
CHD8-209ENST00000555935 KRTAP4-5Q9BYR2 181 aa3.26□□□□□ -1.89
CHD8-209ENST00000555935 HERC1Q15751 4861 aa3.25□□□□□ -1.89
CHD8-209ENST00000555935 INE1O15225 51 aa3.25□□□□□ -1.89
CHD8-209ENST00000555935 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
CHD8-209ENST00000555935 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
CHD8-209ENST00000555935 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
CHD8-209ENST00000555935 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
CHD8-209ENST00000555935 LOC100996750A0A140TA64 210 aa3.19□□□□□ -1.9
CHD8-209ENST00000555935 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
CHD8-209ENST00000555935 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
CHD8-209ENST00000555935 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
CHD8-209ENST00000555935 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
CHD8-209ENST00000555935 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
CHD8-209ENST00000555935 MUC2Q02817 5179 aa3.03□□□□□ -1.92
CHD8-209ENST00000555935 M0R2T5 61 aa3.03□□□□□ -1.93
CHD8-209ENST00000555935 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
CHD8-209ENST00000555935 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
CHD8-209ENST00000555935 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CHD8-209ENST00000555935 MT2AP02795 61 aa3.01□□□□□ -1.93
CHD8-209ENST00000555935 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
CHD8-209ENST00000555935 MT1FP04733 61 aa3□□□□□ -1.93
CHD8-209ENST00000555935 MT1XP80297 61 aa3□□□□□ -1.93
CHD8-209ENST00000555935 MT1HP80294 61 aa2.99□□□□□ -1.93
CHD8-209ENST00000555935 MT1BP07438 61 aa2.97□□□□□ -1.93
CHD8-209ENST00000555935 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
CHD8-209ENST00000555935 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
CHD8-209ENST00000555935 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
CHD8-209ENST00000555935 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
CHD8-209ENST00000555935 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
CHD8-209ENST00000555935 KRTAP9-2Q9BYQ4 174 aa2.89□□□□□ -1.95
CHD8-209ENST00000555935 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
CHD8-209ENST00000555935 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
CHD8-209ENST00000555935 KRTAP9-6A0A140TA67 174 aa2.87□□□□□ -1.95
CHD8-209ENST00000555935 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
CHD8-209ENST00000555935 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.96
CHD8-209ENST00000555935 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
CHD8-209ENST00000555935 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
CHD8-209ENST00000555935 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
CHD8-209ENST00000555935 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
CHD8-209ENST00000555935 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
CHD8-209ENST00000555935 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
CHD8-209ENST00000555935 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
CHD8-209ENST00000555935 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
CHD8-209ENST00000555935 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms