RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
RCCD1-204ENST00000555737 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
RCCD1-204ENST00000555737 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
RCCD1-204ENST00000555737 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
RCCD1-204ENST00000555737 SPINT4Q6UDR6 99 aa9.16□□□□□ -0.94
RCCD1-204ENST00000555737 KRTAP10-4P60372 401 aaPredicted RBP9.13□□□□□ -0.95
RCCD1-204ENST00000555737 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
RCCD1-204ENST00000555737 HSPG2P98160 4391 aa9.11□□□□□ -0.95
RCCD1-204ENST00000555737 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
RCCD1-204ENST00000555737 S4R3F8 94 aa9.1□□□□□ -0.95
RCCD1-204ENST00000555737 NDUFAF8A1L188 74 aa9.07□□□□□ -0.96
RCCD1-204ENST00000555737 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
RCCD1-204ENST00000555737 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
RCCD1-204ENST00000555737 A0A1B0GVY2 172 aa9.02□□□□□ -0.96
RCCD1-204ENST00000555737 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.97
RCCD1-204ENST00000555737 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
RCCD1-204ENST00000555737 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
RCCD1-204ENST00000555737 XP32Q5T750 250 aa8.99□□□□□ -0.97
RCCD1-204ENST00000555737 Q5VSD8 79 aa8.97□□□□□ -0.97
RCCD1-204ENST00000555737 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
RCCD1-204ENST00000555737 LPAP08519 4548 aa8.93□□□□□ -0.98
RCCD1-204ENST00000555737 LRP2P98164 4655 aa8.83□□□□□ -1
RCCD1-204ENST00000555737 RYR2Q92736 4967 aa8.83□□□□□ -1
RCCD1-204ENST00000555737 TNXBP22105 4242 aa8.78□□□□□ -1
RCCD1-204ENST00000555737 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
RCCD1-204ENST00000555737 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
RCCD1-204ENST00000555737 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
RCCD1-204ENST00000555737 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
RCCD1-204ENST00000555737 M0QZ58 72 aa8.68□□□□□ -1.02
RCCD1-204ENST00000555737 RYR1P21817 5038 aa8.65□□□□□ -1.02
RCCD1-204ENST00000555737 RYR3Q15413 4870 aa8.65□□□□□ -1.03
RCCD1-204ENST00000555737 R4GN34 69 aa8.6□□□□□ -1.03
RCCD1-204ENST00000555737 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
RCCD1-204ENST00000555737 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
RCCD1-204ENST00000555737 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
RCCD1-204ENST00000555737 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.05
RCCD1-204ENST00000555737 EPPK1P58107 5090 aaKnown RBP8.34□□□□□ -1.07
RCCD1-204ENST00000555737 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
RCCD1-204ENST00000555737 MUC2Q02817 5179 aa8.32□□□□□ -1.08
RCCD1-204ENST00000555737 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
RCCD1-204ENST00000555737 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
RCCD1-204ENST00000555737 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
RCCD1-204ENST00000555737 KRTAP4-1Q9BYQ7 146 aa8.2□□□□□ -1.1
RCCD1-204ENST00000555737 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
RCCD1-204ENST00000555737 J3QL48 77 aa8.16□□□□□ -1.1
RCCD1-204ENST00000555737 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
RCCD1-204ENST00000555737 HERC2O95714 4834 aa7.93□□□□□ -1.14
RCCD1-204ENST00000555737 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
RCCD1-204ENST00000555737 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
RCCD1-204ENST00000555737 TNP1P09430 55 aa7.78□□□□□ -1.16
RCCD1-204ENST00000555737 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
RCCD1-204ENST00000555737 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
RCCD1-204ENST00000555737 HERC1Q15751 4861 aa7.74□□□□□ -1.17
RCCD1-204ENST00000555737 M0R2T5 61 aa7.69□□□□□ -1.18
RCCD1-204ENST00000555737 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
RCCD1-204ENST00000555737 FLGP20930 4061 aaPredicted RBP7.6□□□□□ -1.19
RCCD1-204ENST00000555737 BIRC6Q9NR09 4857 aa7.44□□□□□ -1.22
RCCD1-204ENST00000555737 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
RCCD1-204ENST00000555737 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
RCCD1-204ENST00000555737 KRTAP10-10P60014 251 aa7.4□□□□□ -1.23
RCCD1-204ENST00000555737 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
RCCD1-204ENST00000555737 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
RCCD1-204ENST00000555737 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
RCCD1-204ENST00000555737 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
RCCD1-204ENST00000555737 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
RCCD1-204ENST00000555737 SPRR5A0A1B0GTR4 108 aa7.23□□□□□ -1.25
RCCD1-204ENST00000555737 MT1FP04733 61 aa7.22□□□□□ -1.25
RCCD1-204ENST00000555737 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
RCCD1-204ENST00000555737 MT1HP80294 61 aa7.18□□□□□ -1.26
RCCD1-204ENST00000555737 MT2AP02795 61 aa7.14□□□□□ -1.27
RCCD1-204ENST00000555737 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
RCCD1-204ENST00000555737 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
RCCD1-204ENST00000555737 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
RCCD1-204ENST00000555737 USH2AO75445 5202 aa6.97□□□□□ -1.29
RCCD1-204ENST00000555737 KMT2DO14686 5537 aa6.96□□□□□ -1.3
RCCD1-204ENST00000555737 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
RCCD1-204ENST00000555737 MT1XP80297 61 aa6.95□□□□□ -1.3
RCCD1-204ENST00000555737 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
RCCD1-204ENST00000555737 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
RCCD1-204ENST00000555737 MT1BP07438 61 aa6.92□□□□□ -1.3
RCCD1-204ENST00000555737 INE1O15225 51 aa6.9□□□□□ -1.3
RCCD1-204ENST00000555737 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
RCCD1-204ENST00000555737 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
RCCD1-204ENST00000555737 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
RCCD1-204ENST00000555737 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
RCCD1-204ENST00000555737 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
RCCD1-204ENST00000555737 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
RCCD1-204ENST00000555737 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
RCCD1-204ENST00000555737 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
RCCD1-204ENST00000555737 LCE2BO14633 110 aa6.49□□□□□ -1.37
RCCD1-204ENST00000555737 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
RCCD1-204ENST00000555737 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
RCCD1-204ENST00000555737 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
RCCD1-204ENST00000555737 DSTQ03001 7570 aaKnown RBP6.17□□□□□ -1.42
RCCD1-204ENST00000555737 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
RCCD1-204ENST00000555737 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
RCCD1-204ENST00000555737 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
RCCD1-204ENST00000555737 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
RCCD1-204ENST00000555737 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
RCCD1-204ENST00000555737 MT1LQ93083 61 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms