RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
MARK3-209ENST00000555235 FAT1Q14517 4588 aa8.41□□□□□ -1.06
MARK3-209ENST00000555235 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
MARK3-209ENST00000555235 P0C880 135 aa8.31□□□□□ -1.08
MARK3-209ENST00000555235 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
MARK3-209ENST00000555235 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
MARK3-209ENST00000555235 KRTAP13-4Q3LI77 160 aa8.24□□□□□ -1.09
MARK3-209ENST00000555235 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
MARK3-209ENST00000555235 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
MARK3-209ENST00000555235 A0A0D9SG42 100 aa8.22□□□□□ -1.09
MARK3-209ENST00000555235 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
MARK3-209ENST00000555235 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
MARK3-209ENST00000555235 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
MARK3-209ENST00000555235 RYR1P21817 5038 aa8.19□□□□□ -1.1
MARK3-209ENST00000555235 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
MARK3-209ENST00000555235 S4R3F8 94 aa8.15□□□□□ -1.1
MARK3-209ENST00000555235 HSPG2P98160 4391 aa8.15□□□□□ -1.1
MARK3-209ENST00000555235 TNXBP22105 4242 aa8.15□□□□□ -1.11
MARK3-209ENST00000555235 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
MARK3-209ENST00000555235 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
MARK3-209ENST00000555235 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.11
MARK3-209ENST00000555235 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
MARK3-209ENST00000555235 Q5VSD8 79 aa8.08□□□□□ -1.12
MARK3-209ENST00000555235 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
MARK3-209ENST00000555235 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
MARK3-209ENST00000555235 XP32Q5T750 250 aa8.04□□□□□ -1.12
MARK3-209ENST00000555235 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
MARK3-209ENST00000555235 HERC2O95714 4834 aa8□□□□□ -1.13
MARK3-209ENST00000555235 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
MARK3-209ENST00000555235 KRTAP12-1P59990 96 aa7.96□□□□□ -1.13
MARK3-209ENST00000555235 NDUFAF8A1L188 74 aa7.96□□□□□ -1.14
MARK3-209ENST00000555235 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
MARK3-209ENST00000555235 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
MARK3-209ENST00000555235 M0QZ58 72 aa7.89□□□□□ -1.15
MARK3-209ENST00000555235 PCLOQ9Y6V0 5065 aa7.84□□□□□ -1.15
MARK3-209ENST00000555235 MT1HL1P0DM35 61 aa7.82□□□□□ -1.16
MARK3-209ENST00000555235 LPAP08519 4548 aa7.69□□□□□ -1.18
MARK3-209ENST00000555235 J3QL48 77 aa7.69□□□□□ -1.18
MARK3-209ENST00000555235 LRP2P98164 4655 aa7.66□□□□□ -1.18
MARK3-209ENST00000555235 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
MARK3-209ENST00000555235 R4GN34 69 aa7.59□□□□□ -1.19
MARK3-209ENST00000555235 HERC1Q15751 4861 aa7.59□□□□□ -1.19
MARK3-209ENST00000555235 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
MARK3-209ENST00000555235 MUC17Q685J3 4493 aa7.4□□□□□ -1.22
MARK3-209ENST00000555235 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
MARK3-209ENST00000555235 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
MARK3-209ENST00000555235 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
MARK3-209ENST00000555235 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
MARK3-209ENST00000555235 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
MARK3-209ENST00000555235 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
MARK3-209ENST00000555235 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
MARK3-209ENST00000555235 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
MARK3-209ENST00000555235 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
MARK3-209ENST00000555235 UBR4Q5T4S7 5183 aa7.13□□□□□ -1.27
MARK3-209ENST00000555235 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
MARK3-209ENST00000555235 TNP1P09430 55 aa7.04□□□□□ -1.28
MARK3-209ENST00000555235 MUC2Q02817 5179 aa7.04□□□□□ -1.28
MARK3-209ENST00000555235 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
MARK3-209ENST00000555235 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
MARK3-209ENST00000555235 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
MARK3-209ENST00000555235 FAT4Q6V0I7 4981 aa6.75□□□□□ -1.33
MARK3-209ENST00000555235 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
MARK3-209ENST00000555235 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
MARK3-209ENST00000555235 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
MARK3-209ENST00000555235 LCE2BO14633 110 aa6.6□□□□□ -1.35
MARK3-209ENST00000555235 LCE3AQ5TA76 89 aa6.57□□□□□ -1.36
MARK3-209ENST00000555235 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
MARK3-209ENST00000555235 MT1HP80294 61 aa6.52□□□□□ -1.37
MARK3-209ENST00000555235 M0R2T5 61 aa6.51□□□□□ -1.37
MARK3-209ENST00000555235 INE1O15225 51 aa6.47□□□□□ -1.37
MARK3-209ENST00000555235 MT2AP02795 61 aa6.47□□□□□ -1.37
MARK3-209ENST00000555235 MT1FP04733 61 aa6.47□□□□□ -1.37
MARK3-209ENST00000555235 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
MARK3-209ENST00000555235 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
MARK3-209ENST00000555235 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
MARK3-209ENST00000555235 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
MARK3-209ENST00000555235 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
MARK3-209ENST00000555235 MT1BP07438 61 aa6.29□□□□□ -1.4
MARK3-209ENST00000555235 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
MARK3-209ENST00000555235 MT1XP80297 61 aa6.28□□□□□ -1.4
MARK3-209ENST00000555235 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
MARK3-209ENST00000555235 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
MARK3-209ENST00000555235 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
MARK3-209ENST00000555235 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
MARK3-209ENST00000555235 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
MARK3-209ENST00000555235 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
MARK3-209ENST00000555235 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
MARK3-209ENST00000555235 USH2AO75445 5202 aa5.89□□□□□ -1.47
MARK3-209ENST00000555235 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
MARK3-209ENST00000555235 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
MARK3-209ENST00000555235 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
MARK3-209ENST00000555235 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
MARK3-209ENST00000555235 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
MARK3-209ENST00000555235 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
MARK3-209ENST00000555235 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
MARK3-209ENST00000555235 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
MARK3-209ENST00000555235 CRCT1Q9UGL9 99 aa5.66□□□□□ -1.5
MARK3-209ENST00000555235 KMT2DO14686 5537 aa5.65□□□□□ -1.51
MARK3-209ENST00000555235 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
MARK3-209ENST00000555235 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms