RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
GABRB3-206ENST00000554556 H0YAA0 97 aa9.52□□□□□ -0.89
GABRB3-206ENST00000554556 K7EP34 96 aa9.52□□□□□ -0.89
GABRB3-206ENST00000554556 NDUFC1O43677 76 aa9.52□□□□□ -0.89
GABRB3-206ENST00000554556 MDN1Q9NU22 5596 aa9.51□□□□□ -0.89
GABRB3-206ENST00000554556 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
GABRB3-206ENST00000554556 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
GABRB3-206ENST00000554556 SPRR2FQ96RM1 72 aa9.45□□□□□ -0.9
GABRB3-206ENST00000554556 A8MUN3 132 aa9.42□□□□□ -0.9
GABRB3-206ENST00000554556 LOC105371267A0A1B0GV96 52 aa9.41□□□□□ -0.9
GABRB3-206ENST00000554556 SPRR2EP22531 72 aa9.41□□□□□ -0.9
GABRB3-206ENST00000554556 SPRR2BP35325 72 aa9.41□□□□□ -0.9
GABRB3-206ENST00000554556 SPRR2AP35326 72 aa9.41□□□□□ -0.9
GABRB3-206ENST00000554556 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
GABRB3-206ENST00000554556 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
GABRB3-206ENST00000554556 F8W1H4 67 aa9.38□□□□□ -0.91
GABRB3-206ENST00000554556 ACYP1P07311 99 aa9.38□□□□□ -0.91
GABRB3-206ENST00000554556 ATOX1O00244 68 aa9.36□□□□□ -0.91
GABRB3-206ENST00000554556 UQCRQO14949 82 aa9.36□□□□□ -0.91
GABRB3-206ENST00000554556 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
GABRB3-206ENST00000554556 PLAC4Q8WY50 150 aa9.36□□□□□ -0.91
GABRB3-206ENST00000554556 H0Y9P7 68 aa9.33□□□□□ -0.92
GABRB3-206ENST00000554556 MT1XP80297 61 aa9.33□□□□□ -0.92
GABRB3-206ENST00000554556 KRTAP8-1Q8IUC2 63 aa9.31□□□□□ -0.92
GABRB3-206ENST00000554556 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
GABRB3-206ENST00000554556 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
GABRB3-206ENST00000554556 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
GABRB3-206ENST00000554556 R4GN34 69 aa9.22□□□□□ -0.93
GABRB3-206ENST00000554556 KRTAP2-2Q9BYT5 123 aa9.21□□□□□ -0.94
GABRB3-206ENST00000554556 KRTAP2-1Q9BYU5 128 aa9.21□□□□□ -0.94
GABRB3-206ENST00000554556 LCE1AQ5T7P2 110 aa9.2□□□□□ -0.94
GABRB3-206ENST00000554556 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
GABRB3-206ENST00000554556 LINC00208Q96KT6 92 aa9.16□□□□□ -0.94
GABRB3-206ENST00000554556 FAM240AA0A1B0GVK7 77 aa9.12□□□□□ -0.95
GABRB3-206ENST00000554556 M0QZ58 72 aa9.1□□□□□ -0.95
GABRB3-206ENST00000554556 SPRR2DP22532 72 aa9.1□□□□□ -0.95
GABRB3-206ENST00000554556 P0C880 135 aa9.09□□□□□ -0.95
GABRB3-206ENST00000554556 MP68P56378 58 aa9.07□□□□□ -0.96
GABRB3-206ENST00000554556 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
GABRB3-206ENST00000554556 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
GABRB3-206ENST00000554556 LINC01554Q52M75 96 aa9□□□□□ -0.97
GABRB3-206ENST00000554556 LINC00643Q86TS7 51 aa8.97□□□□□ -0.97
GABRB3-206ENST00000554556 OCR1Q9BZK8 76 aa8.96□□□□□ -0.98
GABRB3-206ENST00000554556 KRTAP3-2Q9BYR7 98 aa8.93□□□□□ -0.98
GABRB3-206ENST00000554556 PCP4L1A6NKN8 68 aa8.91□□□□□ -0.98
GABRB3-206ENST00000554556 KRTAP10-7P60409 375 aaPredicted RBP8.9□□□□□ -0.98
GABRB3-206ENST00000554556 DMAC1Q96GE9 116 aa8.9□□□□□ -0.98
GABRB3-206ENST00000554556 H3BPC8 53 aa8.89□□□□□ -0.99
GABRB3-206ENST00000554556 LCE3BQ5TA77 95 aa8.88□□□□□ -0.99
GABRB3-206ENST00000554556 KRTAP10-12P60413 245 aa8.87□□□□□ -0.99
GABRB3-206ENST00000554556 MT-ATP8P03928 68 aa8.78□□□□□ -1
GABRB3-206ENST00000554556 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
GABRB3-206ENST00000554556 SCGB1A1P11684 91 aa8.69□□□□□ -1.02
GABRB3-206ENST00000554556 ACYP2P14621 99 aa8.68□□□□□ -1.02
GABRB3-206ENST00000554556 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
GABRB3-206ENST00000554556 CHKB-CPT1BH3BT56 60 aa8.51□□□□□ -1.05
GABRB3-206ENST00000554556 J3QR89 54 aa8.49□□□□□ -1.05
GABRB3-206ENST00000554556 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
GABRB3-206ENST00000554556 DSTQ03001 7570 aaKnown RBP8.41□□□□□ -1.06
GABRB3-206ENST00000554556 LCE5AQ5TCM9 118 aa8.39□□□□□ -1.07
GABRB3-206ENST00000554556 A0A1B0GV90 55 aa8.37□□□□□ -1.07
GABRB3-206ENST00000554556 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
GABRB3-206ENST00000554556 KRTAP19-7Q3SYF9 63 aa8.34□□□□□ -1.07
GABRB3-206ENST00000554556 KRTAP19-3Q7Z4W3 81 aa8.33□□□□□ -1.08
GABRB3-206ENST00000554556 KRTAP4-9Q9BYQ8 210 aa8.33□□□□□ -1.08
GABRB3-206ENST00000554556 GPR98Q8WXG9 6306 aa8.33□□□□□ -1.08
GABRB3-206ENST00000554556 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
GABRB3-206ENST00000554556 MT1EP04732 61 aa8.3□□□□□ -1.08
GABRB3-206ENST00000554556 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
GABRB3-206ENST00000554556 SPANXA2-OT1Q8N9U9 137 aa8.18□□□□□ -1.1
GABRB3-206ENST00000554556 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
GABRB3-206ENST00000554556 A0A0D9SG42 100 aa8.12□□□□□ -1.11
GABRB3-206ENST00000554556 MT1GP13640 62 aa8.12□□□□□ -1.11
GABRB3-206ENST00000554556 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
GABRB3-206ENST00000554556 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
GABRB3-206ENST00000554556 SEC61GP60059 68 aa8.05□□□□□ -1.12
GABRB3-206ENST00000554556 KRTAP19-5Q3LI72 72 aa8.05□□□□□ -1.12
GABRB3-206ENST00000554556 LCE4AQ5TA78 99 aa8.04□□□□□ -1.12
GABRB3-206ENST00000554556 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
GABRB3-206ENST00000554556 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
GABRB3-206ENST00000554556 MT4P47944 62 aa7.97□□□□□ -1.13
GABRB3-206ENST00000554556 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
GABRB3-206ENST00000554556 COA5Q86WW8 74 aa7.95□□□□□ -1.14
GABRB3-206ENST00000554556 K7ERU9 68 aa7.94□□□□□ -1.14
GABRB3-206ENST00000554556 MT1MQ8N339 61 aa7.93□□□□□ -1.14
GABRB3-206ENST00000554556 A0A1B0GU33 70 aa7.9□□□□□ -1.14
GABRB3-206ENST00000554556 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
GABRB3-206ENST00000554556 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
GABRB3-206ENST00000554556 MT1LQ93083 61 aa7.87□□□□□ -1.15
GABRB3-206ENST00000554556 HMCN1Q96RW7 5635 aa7.82□□□□□ -1.16
GABRB3-206ENST00000554556 KRTAP5-4Q6L8H1 288 aa7.78□□□□□ -1.16
GABRB3-206ENST00000554556 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
GABRB3-206ENST00000554556 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
GABRB3-206ENST00000554556 SMIM26A0A096LP01 95 aa7.71□□□□□ -1.18
GABRB3-206ENST00000554556 KRTAP5-10Q6L8G5 202 aa7.7□□□□□ -1.18
GABRB3-206ENST00000554556 AHNAK2Q8IVF2 5795 aa7.7□□□□□ -1.18
GABRB3-206ENST00000554556 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
GABRB3-206ENST00000554556 TNP1P09430 55 aa7.68□□□□□ -1.18
GABRB3-206ENST00000554556 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
GABRB3-206ENST00000554556 A0A1B0GU69 56 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms