RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 HSPG2P98160 4391 aa8.24□□□□□ -1.09
ARHGEF40-203ENST00000554514 ROMO1P60602 79 aa8.23□□□□□ -1.09
ARHGEF40-203ENST00000554514 COX6B2Q6YFQ2 88 aa8.23□□□□□ -1.09
ARHGEF40-203ENST00000554514 A0A1B0GU33 70 aa8.22□□□□□ -1.09
ARHGEF40-203ENST00000554514 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
ARHGEF40-203ENST00000554514 RYR3Q15413 4870 aa8.17□□□□□ -1.1
ARHGEF40-203ENST00000554514 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
ARHGEF40-203ENST00000554514 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
ARHGEF40-203ENST00000554514 XP32Q5T750 250 aa8.12□□□□□ -1.11
ARHGEF40-203ENST00000554514 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
ARHGEF40-203ENST00000554514 RYR1P21817 5038 aa8.1□□□□□ -1.11
ARHGEF40-203ENST00000554514 KIAA1109Q2LD37 5005 aa8.08□□□□□ -1.12
ARHGEF40-203ENST00000554514 P0C880 135 aa8.05□□□□□ -1.12
ARHGEF40-203ENST00000554514 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.12
ARHGEF40-203ENST00000554514 S4R3F8 94 aa8□□□□□ -1.13
ARHGEF40-203ENST00000554514 LPAP08519 4548 aa8□□□□□ -1.13
ARHGEF40-203ENST00000554514 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
ARHGEF40-203ENST00000554514 A0A0D9SG42 100 aa7.98□□□□□ -1.13
ARHGEF40-203ENST00000554514 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
ARHGEF40-203ENST00000554514 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
ARHGEF40-203ENST00000554514 K7ERS5 55 aa7.94□□□□□ -1.14
ARHGEF40-203ENST00000554514 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
ARHGEF40-203ENST00000554514 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
ARHGEF40-203ENST00000554514 LRP2P98164 4655 aa7.92□□□□□ -1.14
ARHGEF40-203ENST00000554514 EPPK1P58107 5090 aaKnown RBP7.9□□□□□ -1.14
ARHGEF40-203ENST00000554514 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
ARHGEF40-203ENST00000554514 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
ARHGEF40-203ENST00000554514 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
ARHGEF40-203ENST00000554514 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
ARHGEF40-203ENST00000554514 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
ARHGEF40-203ENST00000554514 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
ARHGEF40-203ENST00000554514 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
ARHGEF40-203ENST00000554514 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
ARHGEF40-203ENST00000554514 LUZP6Q538Z0 58 aa7.59□□□□□ -1.19
ARHGEF40-203ENST00000554514 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
ARHGEF40-203ENST00000554514 J3QL48 77 aa7.53□□□□□ -1.2
ARHGEF40-203ENST00000554514 M0QZ58 72 aa7.51□□□□□ -1.21
ARHGEF40-203ENST00000554514 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
ARHGEF40-203ENST00000554514 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
ARHGEF40-203ENST00000554514 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
ARHGEF40-203ENST00000554514 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
ARHGEF40-203ENST00000554514 R4GN34 69 aa7.46□□□□□ -1.22
ARHGEF40-203ENST00000554514 HERC2O95714 4834 aa7.45□□□□□ -1.22
ARHGEF40-203ENST00000554514 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
ARHGEF40-203ENST00000554514 MUC2Q02817 5179 aa7.38□□□□□ -1.23
ARHGEF40-203ENST00000554514 KRTAP19-2Q3LHN2 52 aa7.22□□□□□ -1.25
ARHGEF40-203ENST00000554514 HERC1Q15751 4861 aa7.15□□□□□ -1.26
ARHGEF40-203ENST00000554514 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
ARHGEF40-203ENST00000554514 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
ARHGEF40-203ENST00000554514 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.27
ARHGEF40-203ENST00000554514 PCLOQ9Y6V0 5065 aa7.05□□□□□ -1.28
ARHGEF40-203ENST00000554514 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
ARHGEF40-203ENST00000554514 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
ARHGEF40-203ENST00000554514 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
ARHGEF40-203ENST00000554514 M0R2T5 61 aa6.86□□□□□ -1.31
ARHGEF40-203ENST00000554514 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
ARHGEF40-203ENST00000554514 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
ARHGEF40-203ENST00000554514 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
ARHGEF40-203ENST00000554514 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
ARHGEF40-203ENST00000554514 TNP1P09430 55 aa6.76□□□□□ -1.33
ARHGEF40-203ENST00000554514 MT1HP80294 61 aa6.69□□□□□ -1.34
ARHGEF40-203ENST00000554514 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
ARHGEF40-203ENST00000554514 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
ARHGEF40-203ENST00000554514 KRTAP10-10P60014 251 aa6.65□□□□□ -1.35
ARHGEF40-203ENST00000554514 MT1FP04733 61 aa6.6□□□□□ -1.35
ARHGEF40-203ENST00000554514 MT2AP02795 61 aa6.58□□□□□ -1.36
ARHGEF40-203ENST00000554514 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
ARHGEF40-203ENST00000554514 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
ARHGEF40-203ENST00000554514 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
ARHGEF40-203ENST00000554514 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
ARHGEF40-203ENST00000554514 MT1BP07438 61 aa6.34□□□□□ -1.39
ARHGEF40-203ENST00000554514 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
ARHGEF40-203ENST00000554514 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
ARHGEF40-203ENST00000554514 MT1XP80297 61 aa6.29□□□□□ -1.4
ARHGEF40-203ENST00000554514 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
ARHGEF40-203ENST00000554514 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
ARHGEF40-203ENST00000554514 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
ARHGEF40-203ENST00000554514 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
ARHGEF40-203ENST00000554514 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
ARHGEF40-203ENST00000554514 USH2AO75445 5202 aa6.13□□□□□ -1.43
ARHGEF40-203ENST00000554514 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
ARHGEF40-203ENST00000554514 LCE2BO14633 110 aa6.03□□□□□ -1.44
ARHGEF40-203ENST00000554514 INE1O15225 51 aa6.03□□□□□ -1.44
ARHGEF40-203ENST00000554514 KMT2DO14686 5537 aa6.02□□□□□ -1.45
ARHGEF40-203ENST00000554514 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
ARHGEF40-203ENST00000554514 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
ARHGEF40-203ENST00000554514 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
ARHGEF40-203ENST00000554514 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
ARHGEF40-203ENST00000554514 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
ARHGEF40-203ENST00000554514 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
ARHGEF40-203ENST00000554514 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
ARHGEF40-203ENST00000554514 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
ARHGEF40-203ENST00000554514 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
ARHGEF40-203ENST00000554514 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
ARHGEF40-203ENST00000554514 MT1EP04732 61 aa5.44□□□□□ -1.54
ARHGEF40-203ENST00000554514 MT1LQ93083 61 aa5.43□□□□□ -1.54
ARHGEF40-203ENST00000554514 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
ARHGEF40-203ENST00000554514 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
ARHGEF40-203ENST00000554514 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
ARHGEF40-203ENST00000554514 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms