RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
PPP4R3A-202ENST00000554390 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
PPP4R3A-202ENST00000554390 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
PPP4R3A-202ENST00000554390 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
PPP4R3A-202ENST00000554390 A0A0D9SG42 100 aa8.81□□□□□ -1
PPP4R3A-202ENST00000554390 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
PPP4R3A-202ENST00000554390 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
PPP4R3A-202ENST00000554390 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
PPP4R3A-202ENST00000554390 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
PPP4R3A-202ENST00000554390 FAT3Q8TDW7 4589 aa8.76□□□□□ -1.01
PPP4R3A-202ENST00000554390 LPAP08519 4548 aa8.75□□□□□ -1.01
PPP4R3A-202ENST00000554390 RYR2Q92736 4967 aa8.72□□□□□ -1.01
PPP4R3A-202ENST00000554390 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
PPP4R3A-202ENST00000554390 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
PPP4R3A-202ENST00000554390 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
PPP4R3A-202ENST00000554390 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
PPP4R3A-202ENST00000554390 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
PPP4R3A-202ENST00000554390 TNXBP22105 4242 aa8.67□□□□□ -1.02
PPP4R3A-202ENST00000554390 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
PPP4R3A-202ENST00000554390 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
PPP4R3A-202ENST00000554390 S4R3F8 94 aa8.58□□□□□ -1.04
PPP4R3A-202ENST00000554390 LRP2P98164 4655 aa8.58□□□□□ -1.04
PPP4R3A-202ENST00000554390 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
PPP4R3A-202ENST00000554390 KRTAP17-1Q9BYP8 105 aa8.54□□□□□ -1.04
PPP4R3A-202ENST00000554390 RYR3Q15413 4870 aa8.53□□□□□ -1.04
PPP4R3A-202ENST00000554390 XP32Q5T750 250 aa8.5□□□□□ -1.05
PPP4R3A-202ENST00000554390 Q5VSD8 79 aa8.49□□□□□ -1.05
PPP4R3A-202ENST00000554390 RYR1P21817 5038 aa8.49□□□□□ -1.05
PPP4R3A-202ENST00000554390 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
PPP4R3A-202ENST00000554390 ABCA13Q86UQ4 5058 aa8.42□□□□□ -1.06
PPP4R3A-202ENST00000554390 KRTAP21-3Q3LHN1 58 aa8.32□□□□□ -1.08
PPP4R3A-202ENST00000554390 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
PPP4R3A-202ENST00000554390 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
PPP4R3A-202ENST00000554390 M0QZ58 72 aa8.2□□□□□ -1.1
PPP4R3A-202ENST00000554390 MUC2Q02817 5179 aa8.17□□□□□ -1.1
PPP4R3A-202ENST00000554390 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
PPP4R3A-202ENST00000554390 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
PPP4R3A-202ENST00000554390 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
PPP4R3A-202ENST00000554390 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
PPP4R3A-202ENST00000554390 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
PPP4R3A-202ENST00000554390 R4GN34 69 aa7.97□□□□□ -1.13
PPP4R3A-202ENST00000554390 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
PPP4R3A-202ENST00000554390 MUC17Q685J3 4493 aa7.88□□□□□ -1.15
PPP4R3A-202ENST00000554390 HERC2O95714 4834 aa7.77□□□□□ -1.17
PPP4R3A-202ENST00000554390 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
PPP4R3A-202ENST00000554390 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
PPP4R3A-202ENST00000554390 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
PPP4R3A-202ENST00000554390 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
PPP4R3A-202ENST00000554390 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
PPP4R3A-202ENST00000554390 J3QL48 77 aa7.63□□□□□ -1.19
PPP4R3A-202ENST00000554390 HERC1Q15751 4861 aa7.63□□□□□ -1.19
PPP4R3A-202ENST00000554390 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
PPP4R3A-202ENST00000554390 KRTAP19-2Q3LHN2 52 aa7.53□□□□□ -1.2
PPP4R3A-202ENST00000554390 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
PPP4R3A-202ENST00000554390 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
PPP4R3A-202ENST00000554390 TNP1P09430 55 aa7.37□□□□□ -1.23
PPP4R3A-202ENST00000554390 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
PPP4R3A-202ENST00000554390 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
PPP4R3A-202ENST00000554390 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
PPP4R3A-202ENST00000554390 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
PPP4R3A-202ENST00000554390 M0R2T5 61 aa7.14□□□□□ -1.27
PPP4R3A-202ENST00000554390 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
PPP4R3A-202ENST00000554390 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
PPP4R3A-202ENST00000554390 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
PPP4R3A-202ENST00000554390 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
PPP4R3A-202ENST00000554390 KRTAP10-10P60014 251 aa6.94□□□□□ -1.3
PPP4R3A-202ENST00000554390 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
PPP4R3A-202ENST00000554390 MT1FP04733 61 aa6.9□□□□□ -1.3
PPP4R3A-202ENST00000554390 INE1O15225 51 aa6.88□□□□□ -1.31
PPP4R3A-202ENST00000554390 MT1HP80294 61 aa6.88□□□□□ -1.31
PPP4R3A-202ENST00000554390 USH2AO75445 5202 aa6.85□□□□□ -1.31
PPP4R3A-202ENST00000554390 MT2AP02795 61 aa6.83□□□□□ -1.32
PPP4R3A-202ENST00000554390 KMT2DO14686 5537 aa6.8□□□□□ -1.32
PPP4R3A-202ENST00000554390 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
PPP4R3A-202ENST00000554390 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
PPP4R3A-202ENST00000554390 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
PPP4R3A-202ENST00000554390 MT1BP07438 61 aa6.63□□□□□ -1.35
PPP4R3A-202ENST00000554390 MT1XP80297 61 aa6.63□□□□□ -1.35
PPP4R3A-202ENST00000554390 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
PPP4R3A-202ENST00000554390 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
PPP4R3A-202ENST00000554390 KRTAP19-8Q3LI54 63 aa6.56□□□□□ -1.36
PPP4R3A-202ENST00000554390 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
PPP4R3A-202ENST00000554390 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.39
PPP4R3A-202ENST00000554390 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
PPP4R3A-202ENST00000554390 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
PPP4R3A-202ENST00000554390 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
PPP4R3A-202ENST00000554390 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
PPP4R3A-202ENST00000554390 LCE2BO14633 110 aa6.27□□□□□ -1.41
PPP4R3A-202ENST00000554390 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
PPP4R3A-202ENST00000554390 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
PPP4R3A-202ENST00000554390 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
PPP4R3A-202ENST00000554390 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
PPP4R3A-202ENST00000554390 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
PPP4R3A-202ENST00000554390 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
PPP4R3A-202ENST00000554390 DSTQ03001 7570 aaKnown RBP5.95□□□□□ -1.46
PPP4R3A-202ENST00000554390 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
PPP4R3A-202ENST00000554390 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
PPP4R3A-202ENST00000554390 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.46
PPP4R3A-202ENST00000554390 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
PPP4R3A-202ENST00000554390 LCE2AQ5TA79 106 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms