RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 SPRR2GQ9BYE4 73 aa9.86□□□□□ -0.83
RCCD1-202ENST00000554302 S4R3F8 94 aa9.86□□□□□ -0.83
RCCD1-202ENST00000554302 KRTAP19-8Q3LI54 63 aa9.85□□□□□ -0.83
RCCD1-202ENST00000554302 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
RCCD1-202ENST00000554302 A6NN06 94 aa9.83□□□□□ -0.84
RCCD1-202ENST00000554302 CSAG1Q6PB30 78 aa9.83□□□□□ -0.84
RCCD1-202ENST00000554302 GTF2H5Q6ZYL4 71 aa9.83□□□□□ -0.84
RCCD1-202ENST00000554302 LCA10Q71F78 164 aa9.82□□□□□ -0.84
RCCD1-202ENST00000554302 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
RCCD1-202ENST00000554302 Q5VV11 94 aa9.81□□□□□ -0.84
RCCD1-202ENST00000554302 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
RCCD1-202ENST00000554302 K7EP34 96 aa9.79□□□□□ -0.84
RCCD1-202ENST00000554302 PRO0461Q9UI25 63 aa9.76□□□□□ -0.85
RCCD1-202ENST00000554302 NEBP20929 6669 aa9.75□□□□□ -0.85
RCCD1-202ENST00000554302 MUC12Q9UKN1 5478 aa9.75□□□□□ -0.85
RCCD1-202ENST00000554302 KRTAP10-5P60370 271 aa9.72□□□□□ -0.85
RCCD1-202ENST00000554302 TP53AIP1Q9HCN2 124 aa9.72□□□□□ -0.85
RCCD1-202ENST00000554302 KLKP1Q107X0 134 aa9.7□□□□□ -0.86
RCCD1-202ENST00000554302 KRTAP4-2Q9BYR5 136 aa9.68□□□□□ -0.86
RCCD1-202ENST00000554302 F8W1H4 67 aa9.67□□□□□ -0.86
RCCD1-202ENST00000554302 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
RCCD1-202ENST00000554302 KRTAP5-9P26371 169 aa9.58□□□□□ -0.88
RCCD1-202ENST00000554302 CRIPTQ9P021 101 aa9.56□□□□□ -0.88
RCCD1-202ENST00000554302 A0A087WVE0 104 aa9.55□□□□□ -0.88
RCCD1-202ENST00000554302 KMT2DO14686 5537 aa9.5□□□□□ -0.89
RCCD1-202ENST00000554302 ETDBQ3ZM63 59 aa9.47□□□□□ -0.89
RCCD1-202ENST00000554302 TRAV22A0A0B4J277 110 aa9.46□□□□□ -0.9
RCCD1-202ENST00000554302 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.9
RCCD1-202ENST00000554302 KRTAP20-1Q3LI63 56 aa9.46□□□□□ -0.9
RCCD1-202ENST00000554302 MDN1Q9NU22 5596 aa9.45□□□□□ -0.9
RCCD1-202ENST00000554302 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
RCCD1-202ENST00000554302 J3QR89 54 aa9.42□□□□□ -0.9
RCCD1-202ENST00000554302 H0YAA0 97 aa9.41□□□□□ -0.9
RCCD1-202ENST00000554302 K7ERU9 68 aa9.41□□□□□ -0.9
RCCD1-202ENST00000554302 NDUFC1O43677 76 aa9.34□□□□□ -0.91
RCCD1-202ENST00000554302 UQCRQO14949 82 aa9.3□□□□□ -0.92
RCCD1-202ENST00000554302 FAM240AA0A1B0GVK7 77 aa9.29□□□□□ -0.92
RCCD1-202ENST00000554302 ATOX1O00244 68 aa9.28□□□□□ -0.92
RCCD1-202ENST00000554302 H0Y9P7 68 aa9.27□□□□□ -0.93
RCCD1-202ENST00000554302 ACYP1P07311 99 aa9.27□□□□□ -0.93
RCCD1-202ENST00000554302 A8MUN3 132 aa9.24□□□□□ -0.93
RCCD1-202ENST00000554302 ATP5EP2Q5VTU8 51 aa9.24□□□□□ -0.93
RCCD1-202ENST00000554302 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
RCCD1-202ENST00000554302 MT1XP80297 61 aa9.21□□□□□ -0.94
RCCD1-202ENST00000554302 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
RCCD1-202ENST00000554302 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
RCCD1-202ENST00000554302 KRTAP2-3P0C7H8 128 aa9.17□□□□□ -0.94
RCCD1-202ENST00000554302 KRTAP2-4Q9BYR9 128 aa9.17□□□□□ -0.94
RCCD1-202ENST00000554302 SPRR2FQ96RM1 72 aa9.16□□□□□ -0.94
RCCD1-202ENST00000554302 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
RCCD1-202ENST00000554302 SPRR2EP22531 72 aa9.08□□□□□ -0.96
RCCD1-202ENST00000554302 SPRR2BP35325 72 aa9.08□□□□□ -0.96
RCCD1-202ENST00000554302 SPRR2AP35326 72 aa9.08□□□□□ -0.96
RCCD1-202ENST00000554302 LINC00643Q86TS7 51 aa9.08□□□□□ -0.96
RCCD1-202ENST00000554302 PLAC4Q8WY50 150 aa9.08□□□□□ -0.96
RCCD1-202ENST00000554302 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
RCCD1-202ENST00000554302 KRTAP8-1Q8IUC2 63 aa9.04□□□□□ -0.96
RCCD1-202ENST00000554302 P0C880 135 aa9.02□□□□□ -0.97
RCCD1-202ENST00000554302 OCR1Q9BZK8 76 aa9.02□□□□□ -0.97
RCCD1-202ENST00000554302 R4GN34 69 aa9.02□□□□□ -0.97
RCCD1-202ENST00000554302 MP68P56378 58 aa8.98□□□□□ -0.97
RCCD1-202ENST00000554302 LCE1AQ5T7P2 110 aa8.98□□□□□ -0.97
RCCD1-202ENST00000554302 C20orf197Q8N268 126 aa8.96□□□□□ -0.98
RCCD1-202ENST00000554302 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
RCCD1-202ENST00000554302 M0QZ58 72 aa8.93□□□□□ -0.98
RCCD1-202ENST00000554302 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
RCCD1-202ENST00000554302 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
RCCD1-202ENST00000554302 KRTAP2-2Q9BYT5 123 aa8.87□□□□□ -0.99
RCCD1-202ENST00000554302 KRTAP2-1Q9BYU5 128 aa8.87□□□□□ -0.99
RCCD1-202ENST00000554302 H3BPC8 53 aa8.86□□□□□ -0.99
RCCD1-202ENST00000554302 SPRR2DP22532 72 aa8.78□□□□□ -1
RCCD1-202ENST00000554302 LINC01554Q52M75 96 aa8.78□□□□□ -1
RCCD1-202ENST00000554302 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
RCCD1-202ENST00000554302 KRTAP10-12P60413 245 aa8.76□□□□□ -1.01
RCCD1-202ENST00000554302 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
RCCD1-202ENST00000554302 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
RCCD1-202ENST00000554302 ACYP2P14621 99 aa8.59□□□□□ -1.03
RCCD1-202ENST00000554302 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
RCCD1-202ENST00000554302 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
RCCD1-202ENST00000554302 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
RCCD1-202ENST00000554302 COX7CP15954 63 aa8.49□□□□□ -1.05
RCCD1-202ENST00000554302 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
RCCD1-202ENST00000554302 CCDC179H3BU77 68 aa8.35□□□□□ -1.07
RCCD1-202ENST00000554302 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
RCCD1-202ENST00000554302 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
RCCD1-202ENST00000554302 KRTAP19-7Q3SYF9 63 aa8.25□□□□□ -1.09
RCCD1-202ENST00000554302 MT3P25713 68 aa8.23□□□□□ -1.09
RCCD1-202ENST00000554302 SNURFQ9Y675 71 aa8.23□□□□□ -1.09
RCCD1-202ENST00000554302 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
RCCD1-202ENST00000554302 SPANXA2-OT1Q8N9U9 137 aa8.21□□□□□ -1.1
RCCD1-202ENST00000554302 KRTAP5-3Q6L8H2 238 aa8.19□□□□□ -1.1
RCCD1-202ENST00000554302 MT1EP04732 61 aa8.18□□□□□ -1.1
RCCD1-202ENST00000554302 H7BZZ5 65 aa8.17□□□□□ -1.1
RCCD1-202ENST00000554302 KRTAP19-3Q7Z4W3 81 aa8.16□□□□□ -1.1
RCCD1-202ENST00000554302 TMEM258P61165 79 aa8.15□□□□□ -1.1
RCCD1-202ENST00000554302 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
RCCD1-202ENST00000554302 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.1
RCCD1-202ENST00000554302 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
RCCD1-202ENST00000554302 GPR98Q8WXG9 6306 aa8.04□□□□□ -1.12
RCCD1-202ENST00000554302 A0A0D9SG42 100 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms