RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ETDBQ3ZM63 59 aa8.2□□□□□ -1.1
CPSF2-203ENST00000554290 NEBP20929 6669 aa8.19□□□□□ -1.1
CPSF2-203ENST00000554290 KRTAP5-9P26371 169 aa8.16□□□□□ -1.1
CPSF2-203ENST00000554290 NDUFC1O43677 76 aa8.14□□□□□ -1.11
CPSF2-203ENST00000554290 MUC12Q9UKN1 5478 aa8.12□□□□□ -1.11
CPSF2-203ENST00000554290 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
CPSF2-203ENST00000554290 H0YAA0 97 aa8.11□□□□□ -1.11
CPSF2-203ENST00000554290 ATOX1O00244 68 aa8.09□□□□□ -1.11
CPSF2-203ENST00000554290 UQCRQO14949 82 aa8.09□□□□□ -1.11
CPSF2-203ENST00000554290 ACYP1P07311 99 aa8.08□□□□□ -1.12
CPSF2-203ENST00000554290 H0Y9P7 68 aa8.06□□□□□ -1.12
CPSF2-203ENST00000554290 HIST1H4AP62805 103 aaKnown RBP8.05□□□□□ -1.12
CPSF2-203ENST00000554290 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
CPSF2-203ENST00000554290 A8MUN3 132 aa8.02□□□□□ -1.13
CPSF2-203ENST00000554290 KMT2DO14686 5537 aa8.01□□□□□ -1.13
CPSF2-203ENST00000554290 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
CPSF2-203ENST00000554290 FAM240AA0A1B0GVK7 77 aa7.99□□□□□ -1.13
CPSF2-203ENST00000554290 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
CPSF2-203ENST00000554290 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
CPSF2-203ENST00000554290 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
CPSF2-203ENST00000554290 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
CPSF2-203ENST00000554290 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
CPSF2-203ENST00000554290 KRTAP2-3P0C7H8 128 aa7.88□□□□□ -1.15
CPSF2-203ENST00000554290 SPRR2FQ96RM1 72 aa7.88□□□□□ -1.15
CPSF2-203ENST00000554290 KRTAP2-4Q9BYR9 128 aa7.88□□□□□ -1.15
CPSF2-203ENST00000554290 MT1XP80297 61 aa7.87□□□□□ -1.15
CPSF2-203ENST00000554290 MP68P56378 58 aa7.86□□□□□ -1.15
CPSF2-203ENST00000554290 LINC00643Q86TS7 51 aa7.85□□□□□ -1.15
CPSF2-203ENST00000554290 R4GN34 69 aa7.85□□□□□ -1.15
CPSF2-203ENST00000554290 C20orf197Q8N268 126 aa7.83□□□□□ -1.16
CPSF2-203ENST00000554290 SPRR2EP22531 72 aa7.82□□□□□ -1.16
CPSF2-203ENST00000554290 SPRR2BP35325 72 aa7.82□□□□□ -1.16
CPSF2-203ENST00000554290 SPRR2AP35326 72 aa7.82□□□□□ -1.16
CPSF2-203ENST00000554290 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
CPSF2-203ENST00000554290 OCR1Q9BZK8 76 aa7.79□□□□□ -1.16
CPSF2-203ENST00000554290 P0C880 135 aa7.77□□□□□ -1.17
CPSF2-203ENST00000554290 M0QZ58 72 aa7.76□□□□□ -1.17
CPSF2-203ENST00000554290 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
CPSF2-203ENST00000554290 H3BPC8 53 aa7.71□□□□□ -1.18
CPSF2-203ENST00000554290 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
CPSF2-203ENST00000554290 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
CPSF2-203ENST00000554290 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
CPSF2-203ENST00000554290 KRTAP2-2Q9BYT5 123 aa7.61□□□□□ -1.19
CPSF2-203ENST00000554290 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
CPSF2-203ENST00000554290 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
CPSF2-203ENST00000554290 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
CPSF2-203ENST00000554290 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
CPSF2-203ENST00000554290 SPRR2DP22532 72 aa7.57□□□□□ -1.2
CPSF2-203ENST00000554290 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
CPSF2-203ENST00000554290 J3QR89 54 aa7.51□□□□□ -1.21
CPSF2-203ENST00000554290 ACYP2P14621 99 aa7.5□□□□□ -1.21
CPSF2-203ENST00000554290 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
CPSF2-203ENST00000554290 MT-ATP8P03928 68 aa7.49□□□□□ -1.21
CPSF2-203ENST00000554290 KRTAP10-12P60413 245 aa7.49□□□□□ -1.21
CPSF2-203ENST00000554290 H3BS24 57 aa7.48□□□□□ -1.21
CPSF2-203ENST00000554290 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
CPSF2-203ENST00000554290 A0A1B0GV90 55 aa7.47□□□□□ -1.21
CPSF2-203ENST00000554290 LCE3BQ5TA77 95 aa7.37□□□□□ -1.23
CPSF2-203ENST00000554290 CHKB-CPT1BH3BT56 60 aa7.36□□□□□ -1.23
CPSF2-203ENST00000554290 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
CPSF2-203ENST00000554290 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
CPSF2-203ENST00000554290 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
CPSF2-203ENST00000554290 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
CPSF2-203ENST00000554290 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
CPSF2-203ENST00000554290 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
CPSF2-203ENST00000554290 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
CPSF2-203ENST00000554290 K7ERU9 68 aa7.09□□□□□ -1.27
CPSF2-203ENST00000554290 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
CPSF2-203ENST00000554290 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
CPSF2-203ENST00000554290 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
CPSF2-203ENST00000554290 MT1EP04732 61 aa6.99□□□□□ -1.29
CPSF2-203ENST00000554290 SEC61GP60059 68 aa6.97□□□□□ -1.29
CPSF2-203ENST00000554290 SERP2Q8N6R1 65 aa6.97□□□□□ -1.29
CPSF2-203ENST00000554290 SERP1Q9Y6X1 66 aa6.96□□□□□ -1.3
CPSF2-203ENST00000554290 A0A0D9SG42 100 aa6.95□□□□□ -1.3
CPSF2-203ENST00000554290 COA5Q86WW8 74 aa6.94□□□□□ -1.3
CPSF2-203ENST00000554290 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
CPSF2-203ENST00000554290 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
CPSF2-203ENST00000554290 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
CPSF2-203ENST00000554290 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
CPSF2-203ENST00000554290 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
CPSF2-203ENST00000554290 A0A1B0GU33 70 aa6.84□□□□□ -1.31
CPSF2-203ENST00000554290 MT1GP13640 62 aa6.82□□□□□ -1.32
CPSF2-203ENST00000554290 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
CPSF2-203ENST00000554290 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
CPSF2-203ENST00000554290 GPR98Q8WXG9 6306 aa6.79□□□□□ -1.32
CPSF2-203ENST00000554290 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
CPSF2-203ENST00000554290 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
CPSF2-203ENST00000554290 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
CPSF2-203ENST00000554290 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
CPSF2-203ENST00000554290 MT1MQ8N339 61 aa6.68□□□□□ -1.34
CPSF2-203ENST00000554290 COX7CP15954 63 aa6.67□□□□□ -1.34
CPSF2-203ENST00000554290 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
CPSF2-203ENST00000554290 MT1LQ93083 61 aa6.65□□□□□ -1.34
CPSF2-203ENST00000554290 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
CPSF2-203ENST00000554290 A0A1B0GU69 56 aa6.62□□□□□ -1.35
CPSF2-203ENST00000554290 H7BZZ5 65 aa6.62□□□□□ -1.35
CPSF2-203ENST00000554290 MT4P47944 62 aa6.62□□□□□ -1.35
CPSF2-203ENST00000554290 A8MU10 97 aa6.56□□□□□ -1.36
CPSF2-203ENST00000554290 TNP1P09430 55 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms