RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 COPS9Q8WXC6 57 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 C14orf144Q96I85 54 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 HIST1H4GQ99525 98 aa1.28□□□□□ -2.2
SLIRP-202ENST00000553981 FAM236AA0A1B0GUQ0 79 aa1.27□□□□□ -2.21
SLIRP-202ENST00000553981 FAM236BA0A1B0GV22 79 aa1.27□□□□□ -2.21
SLIRP-202ENST00000553981 Q6ZQT0 140 aa1.27□□□□□ -2.21
SLIRP-202ENST00000553981 MRPL34Q9BQ48 92 aaKnown RBP1.27□□□□□ -2.21
SLIRP-202ENST00000553981 VPS25Q9BRG1 176 aa1.27□□□□□ -2.21
SLIRP-202ENST00000553981 DLEU1O43261 78 aa1.26□□□□□ -2.21
SLIRP-202ENST00000553981 PRR15Q8IV56 129 aa1.26□□□□□ -2.21
SLIRP-202ENST00000553981 HIGD1BQ9P298 99 aa1.26□□□□□ -2.21
SLIRP-202ENST00000553981 PRO1854Q9UHT4 67 aa1.26□□□□□ -2.21
SLIRP-202ENST00000553981 K7EQZ3 153 aa1.25□□□□□ -2.21
SLIRP-202ENST00000553981 TMEM254Q8TBM7 123 aa1.25□□□□□ -2.21
SLIRP-202ENST00000553981 ORMDL1Q9P0S3 153 aa1.25□□□□□ -2.21
SLIRP-202ENST00000553981 TMEM256-PLSCR3K7ERE1 68 aa1.24□□□□□ -2.21
SLIRP-202ENST00000553981 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
SLIRP-202ENST00000553981 S4R3F8 94 aa1.24□□□□□ -2.21
SLIRP-202ENST00000553981 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
SLIRP-202ENST00000553981 hDV103S1A0JD37 113 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 J3KT08 172 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 SPATA45Q537H7 98 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 LYRM7Q5U5X0 104 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 C7orf65Q6ZTY9 151 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 IMUPQ9GZP8 106 aa1.23□□□□□ -2.21
SLIRP-202ENST00000553981 BPY2O14599 106 aa1.22□□□□□ -2.21
SLIRP-202ENST00000553981 BAALC-AS2P0C853 105 aa1.22□□□□□ -2.21
SLIRP-202ENST00000553981 CSAG1Q6PB30 78 aa1.22□□□□□ -2.21
SLIRP-202ENST00000553981 C1orf64Q8NEQ6 169 aa1.22□□□□□ -2.21
SLIRP-202ENST00000553981 NAA38Q9BRA0 125 aaKnown RBP1.22□□□□□ -2.21
SLIRP-202ENST00000553981 LOC110117498A0A087WWA1 95 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 C9JAW5 83 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 HSBP1L1C9JCN9 74 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 HCG22E2RYF7 251 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 NDUFS5O43920 106 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 NDUFB1O75438 58 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 DNAL4O96015 105 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 DSCR8Q96T75 97 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 C14orf132Q9NPU4 83 aa1.21□□□□□ -2.22
SLIRP-202ENST00000553981 MT4P47944 62 aa1.2□□□□□ -2.22
SLIRP-202ENST00000553981 PSMB2P49721 201 aa1.2□□□□□ -2.22
SLIRP-202ENST00000553981 P0C880 135 aa1.19□□□□□ -2.22
SLIRP-202ENST00000553981 S100A2P29034 98 aa1.19□□□□□ -2.22
SLIRP-202ENST00000553981 PYY3Q5JQD4 70 aa1.19□□□□□ -2.22
SLIRP-202ENST00000553981 CRIPTQ9P021 101 aa1.19□□□□□ -2.22
SLIRP-202ENST00000553981 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
SLIRP-202ENST00000553981 H3BQ85 93 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 K7EP34 96 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 SNCGO76070 127 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 MT1EP04732 61 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 HSD52Q0P140 79 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 NREPQ16612 68 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 ADM2Q7Z4H4 148 aa1.18□□□□□ -2.22
SLIRP-202ENST00000553981 A8MUN3 132 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 H0YAA0 97 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 CASC2Q6XLA1 102 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 VAMP8Q9BV40 100 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 PRO2289Q9P1D8 64 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
SLIRP-202ENST00000553981 SCGB1C2P0DMR2 95 aa1.16□□□□□ -2.22
SLIRP-202ENST00000553981 KRTAP12-4P60329 112 aa1.16□□□□□ -2.22
SLIRP-202ENST00000553981 A0A1B0GW54 56 aa1.15□□□□□ -2.23
SLIRP-202ENST00000553981 JMJD7-PLA2G4BH0Y9G9 81 aa1.15□□□□□ -2.23
SLIRP-202ENST00000553981 COX6CP09669 75 aa1.15□□□□□ -2.23
SLIRP-202ENST00000553981 PLAC4Q8WY50 150 aa1.15□□□□□ -2.23
SLIRP-202ENST00000553981 CYP4F30PQ9H0H9 118 aa1.15□□□□□ -2.23
SLIRP-202ENST00000553981 S100A6P06703 90 aa1.14□□□□□ -2.23
SLIRP-202ENST00000553981 ATXN8Q156A1 80 aa1.13□□□□□ -2.23
SLIRP-202ENST00000553981 MT1MQ8N339 61 aa1.13□□□□□ -2.23
SLIRP-202ENST00000553981 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
SLIRP-202ENST00000553981 PDE6GP18545 87 aa1.12□□□□□ -2.23
SLIRP-202ENST00000553981 UQCR10Q9UDW1 63 aa1.12□□□□□ -2.23
SLIRP-202ENST00000553981 M0QZ58 72 aa1.11□□□□□ -2.23
SLIRP-202ENST00000553981 KRTAP19-5Q3LI72 72 aa1.11□□□□□ -2.23
SLIRP-202ENST00000553981 LINC01554Q52M75 96 aa1.11□□□□□ -2.23
SLIRP-202ENST00000553981 TAX1BP3O14907 124 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 MT1GP13640 62 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 S100A1P23297 94 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 KRTAP13-4Q3LI77 160 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 MT1LQ93083 61 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 R4GN34 69 aa1.1□□□□□ -2.23
SLIRP-202ENST00000553981 H3BT86 120 aa1.09□□□□□ -2.23
SLIRP-202ENST00000553981 NDUFC1O43677 76 aa1.09□□□□□ -2.23
SLIRP-202ENST00000553981 KRTAP12-3P60328 96 aa1.08□□□□□ -2.24
SLIRP-202ENST00000553981 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
SLIRP-202ENST00000553981 SPCS1Q9Y6A9 102 aa1.07□□□□□ -2.24
SLIRP-202ENST00000553981 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
SLIRP-202ENST00000553981 TRAV22A0A0B4J277 110 aa1.06□□□□□ -2.24
SLIRP-202ENST00000553981 LOC101927531A0A1B0GV80 90 aa1.06□□□□□ -2.24
SLIRP-202ENST00000553981 A0A1W2PPM0 123 aa1.06□□□□□ -2.24
SLIRP-202ENST00000553981 SEC61GP60059 68 aa1.06□□□□□ -2.24
SLIRP-202ENST00000553981 CAMK2N1Q7Z7J9 78 aa1.06□□□□□ -2.24
SLIRP-202ENST00000553981 SYNE1Q8NF91 8797 aaKnown RBP1.05□□□□□ -2.24
SLIRP-202ENST00000553981 H0Y9P7 68 aa1.05□□□□□ -2.24
SLIRP-202ENST00000553981 A0A0D9SG42 100 aa1.04□□□□□ -2.24
SLIRP-202ENST00000553981 TSTD3H0UI37 97 aa1.04□□□□□ -2.24
SLIRP-202ENST00000553981 M0R143 59 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms