RNA–Protein interactions for RNA: ENST00000553615.5

FCF1-203, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-203ENST00000553615 TGP01266 2768 aa3.43□□□□□ -1.86
FCF1-203ENST00000553615 NBEAL1Q6ZS30 2694 aa3.43□□□□□ -1.86
FCF1-203ENST00000553615 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
FCF1-203ENST00000553615 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
FCF1-203ENST00000553615 FLNAP21333 2647 aaKnown RBP3.42□□□□□ -1.86
FCF1-203ENST00000553615 CUBNO60494 3623 aa3.42□□□□□ -1.86
FCF1-203ENST00000553615 ANK2Q01484 3957 aa3.41□□□□□ -1.86
FCF1-203ENST00000553615 NOTCH2Q04721 2471 aa3.41□□□□□ -1.86
FCF1-203ENST00000553615 PKD1L1Q8TDX9 2849 aa3.4□□□□□ -1.86
FCF1-203ENST00000553615 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.86
FCF1-203ENST00000553615 ACANP16112 2415 aa3.4□□□□□ -1.86
FCF1-203ENST00000553615 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
FCF1-203ENST00000553615 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
FCF1-203ENST00000553615 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.87
FCF1-203ENST00000553615 POLQO75417 2590 aa3.39□□□□□ -1.87
FCF1-203ENST00000553615 TENM3Q9P273 2699 aa3.39□□□□□ -1.87
FCF1-203ENST00000553615 CSMD3Q7Z407 3707 aa3.38□□□□□ -1.87
FCF1-203ENST00000553615 PDZD2O15018 2839 aa3.38□□□□□ -1.87
FCF1-203ENST00000553615 R4GN34 69 aa3.37□□□□□ -1.87
FCF1-203ENST00000553615 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
FCF1-203ENST00000553615 FAM208BQ5VWN6 2430 aa3.34□□□□□ -1.87
FCF1-203ENST00000553615 ITPR2Q14571 2701 aa3.34□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
FCF1-203ENST00000553615 FLNCQ14315 2725 aa3.32□□□□□ -1.88
FCF1-203ENST00000553615 DYNC2H1Q8NCM8 4307 aaKnown RBP3.31□□□□□ -1.88
FCF1-203ENST00000553615 PRKDCP78527 4128 aaKnown RBP3.31□□□□□ -1.88
FCF1-203ENST00000553615 STAB2Q8WWQ8 2551 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP21-3Q3LHN1 58 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 LYSTQ99698 3801 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
FCF1-203ENST00000553615 ATRQ13535 2644 aa3.29□□□□□ -1.88
FCF1-203ENST00000553615 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
FCF1-203ENST00000553615 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
FCF1-203ENST00000553615 KRTAP10-8P60410 259 aa3.28□□□□□ -1.88
FCF1-203ENST00000553615 SMR3AQ99954 134 aa3.28□□□□□ -1.88
FCF1-203ENST00000553615 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
FCF1-203ENST00000553615 DNAH17Q9UFH2 4485 aa3.26□□□□□ -1.89
FCF1-203ENST00000553615 Q5VSD8 79 aa3.26□□□□□ -1.89
FCF1-203ENST00000553615 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
FCF1-203ENST00000553615 COL7A1Q02388 2944 aa3.26□□□□□ -1.89
FCF1-203ENST00000553615 NOTCH1P46531 2555 aa3.25□□□□□ -1.89
FCF1-203ENST00000553615 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
FCF1-203ENST00000553615 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
FCF1-203ENST00000553615 IGSF10Q6WRI0 2623 aa3.22□□□□□ -1.89
FCF1-203ENST00000553615 ZNF469Q96JG9 3925 aaPredicted RBP3.21□□□□□ -1.9
FCF1-203ENST00000553615 TENM1Q9UKZ4 2725 aa3.2□□□□□ -1.9
FCF1-203ENST00000553615 HECTD4Q9Y4D8 3996 aa3.19□□□□□ -1.9
FCF1-203ENST00000553615 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
FCF1-203ENST00000553615 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
FCF1-203ENST00000553615 DNAH11Q96DT5 4516 aa3.17□□□□□ -1.9
FCF1-203ENST00000553615 DNAH2Q9P225 4427 aa3.17□□□□□ -1.9
FCF1-203ENST00000553615 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
FCF1-203ENST00000553615 MGAM2Q2M2H8 2515 aa3.16□□□□□ -1.9
FCF1-203ENST00000553615 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
FCF1-203ENST00000553615 TNP1P09430 55 aa3.13□□□□□ -1.91
FCF1-203ENST00000553615 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
FCF1-203ENST00000553615 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
FCF1-203ENST00000553615 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
FCF1-203ENST00000553615 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
FCF1-203ENST00000553615 SACSQ9NZJ4 4579 aa3.09□□□□□ -1.91
FCF1-203ENST00000553615 STAB1Q9NY15 2570 aa3.08□□□□□ -1.92
FCF1-203ENST00000553615 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
FCF1-203ENST00000553615 J3QKU1 62 aa3.03□□□□□ -1.92
FCF1-203ENST00000553615 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
FCF1-203ENST00000553615 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
FCF1-203ENST00000553615 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
FCF1-203ENST00000553615 DNAH5Q8TE73 4624 aa2.95□□□□□ -1.94
FCF1-203ENST00000553615 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
FCF1-203ENST00000553615 LRP1Q07954 4544 aaKnown RBP2.94□□□□□ -1.94
FCF1-203ENST00000553615 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
FCF1-203ENST00000553615 TNXBP22105 4242 aa2.92□□□□□ -1.94
FCF1-203ENST00000553615 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
FCF1-203ENST00000553615 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
FCF1-203ENST00000553615 KRTAP10-4P60372 401 aaPredicted RBP2.91□□□□□ -1.94
FCF1-203ENST00000553615 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
FCF1-203ENST00000553615 PKD1P98161 4303 aa2.89□□□□□ -1.95
FCF1-203ENST00000553615 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
FCF1-203ENST00000553615 RYR3Q15413 4870 aa2.88□□□□□ -1.95
FCF1-203ENST00000553615 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
FCF1-203ENST00000553615 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
FCF1-203ENST00000553615 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
FCF1-203ENST00000553615 BIRC6Q9NR09 4857 aa2.85□□□□□ -1.95
FCF1-203ENST00000553615 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
FCF1-203ENST00000553615 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
FCF1-203ENST00000553615 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
FCF1-203ENST00000553615 HSPG2P98160 4391 aa2.81□□□□□ -1.96
FCF1-203ENST00000553615 KRTAP8-1Q8IUC2 63 aa2.81□□□□□ -1.96
FCF1-203ENST00000553615 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
FCF1-203ENST00000553615 FAT3Q8TDW7 4589 aa2.79□□□□□ -1.96
FCF1-203ENST00000553615 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
FCF1-203ENST00000553615 RYR1P21817 5038 aa2.77□□□□□ -1.97
FCF1-203ENST00000553615 MUC2Q02817 5179 aa2.77□□□□□ -1.97
FCF1-203ENST00000553615 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
FCF1-203ENST00000553615 FAT1Q14517 4588 aa2.73□□□□□ -1.97
FCF1-203ENST00000553615 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
FCF1-203ENST00000553615 KMT2CQ8NEZ4 4911 aaKnown RBP2.68□□□□□ -1.98
FCF1-203ENST00000553615 KRTAP12-3P60328 96 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms