RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 RYR3Q15413 4870 aa2.86□□□□□ -1.95
TMEM55B-204ENST00000553602 ALMS1Q8TCU4 4167 aa2.85□□□□□ -1.95
TMEM55B-204ENST00000553602 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.95
TMEM55B-204ENST00000553602 DNAH17Q9UFH2 4485 aa2.84□□□□□ -1.96
TMEM55B-204ENST00000553602 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
TMEM55B-204ENST00000553602 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
TMEM55B-204ENST00000553602 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
TMEM55B-204ENST00000553602 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
TMEM55B-204ENST00000553602 H0YAA0 97 aa2.82□□□□□ -1.96
TMEM55B-204ENST00000553602 PLECQ15149 4684 aaKnown RBP2.82□□□□□ -1.96
TMEM55B-204ENST00000553602 A0A1B0GU33 70 aa2.81□□□□□ -1.96
TMEM55B-204ENST00000553602 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
TMEM55B-204ENST00000553602 H1FX-AS1Q4G0G2 97 aa2.81□□□□□ -1.96
TMEM55B-204ENST00000553602 ADM2Q7Z4H4 148 aa2.81□□□□□ -1.96
TMEM55B-204ENST00000553602 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
TMEM55B-204ENST00000553602 BIRC6Q9NR09 4857 aa2.8□□□□□ -1.96
TMEM55B-204ENST00000553602 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
TMEM55B-204ENST00000553602 KMT2AQ03164 3969 aa2.79□□□□□ -1.96
TMEM55B-204ENST00000553602 A0A1B0GVY2 172 aa2.78□□□□□ -1.96
TMEM55B-204ENST00000553602 CSAG1Q6PB30 78 aa2.78□□□□□ -1.96
TMEM55B-204ENST00000553602 K7ERS5 55 aa2.77□□□□□ -1.97
TMEM55B-204ENST00000553602 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
TMEM55B-204ENST00000553602 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
TMEM55B-204ENST00000553602 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
TMEM55B-204ENST00000553602 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
TMEM55B-204ENST00000553602 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
TMEM55B-204ENST00000553602 DNAH2Q9P225 4427 aa2.75□□□□□ -1.97
TMEM55B-204ENST00000553602 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
TMEM55B-204ENST00000553602 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.98
TMEM55B-204ENST00000553602 PKHD1P08F94 4074 aa2.71□□□□□ -1.98
TMEM55B-204ENST00000553602 SMR3BP02814 79 aaPredicted RBP2.7□□□□□ -1.98
TMEM55B-204ENST00000553602 KRTAP10-6P60371 365 aaPredicted RBP2.7□□□□□ -1.98
TMEM55B-204ENST00000553602 KRTAP10-8P60410 259 aa2.7□□□□□ -1.98
TMEM55B-204ENST00000553602 DNAH5Q8TE73 4624 aa2.7□□□□□ -1.98
TMEM55B-204ENST00000553602 PKD1P98161 4303 aa2.69□□□□□ -1.98
TMEM55B-204ENST00000553602 ROMO1P60602 79 aa2.69□□□□□ -1.98
TMEM55B-204ENST00000553602 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
TMEM55B-204ENST00000553602 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
TMEM55B-204ENST00000553602 S4R3F8 94 aa2.68□□□□□ -1.98
TMEM55B-204ENST00000553602 FAT2Q9NYQ8 4349 aa2.67□□□□□ -1.98
TMEM55B-204ENST00000553602 KIAA1109Q2LD37 5005 aa2.66□□□□□ -1.98
TMEM55B-204ENST00000553602 HERC2O95714 4834 aa2.66□□□□□ -1.98
TMEM55B-204ENST00000553602 VPS13BQ7Z7G8 4022 aa2.66□□□□□ -1.98
TMEM55B-204ENST00000553602 RYR1P21817 5038 aa2.65□□□□□ -1.98
TMEM55B-204ENST00000553602 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.99
TMEM55B-204ENST00000553602 DYNC1H1Q14204 4646 aaKnown RBP2.64□□□□□ -1.99
TMEM55B-204ENST00000553602 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
TMEM55B-204ENST00000553602 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
TMEM55B-204ENST00000553602 M0QZ58 72 aa2.62□□□□□ -1.99
TMEM55B-204ENST00000553602 Q5VSD8 79 aa2.62□□□□□ -1.99
TMEM55B-204ENST00000553602 TPRXLQ17RH7 258 aa2.61□□□□□ -1.99
TMEM55B-204ENST00000553602 P0C880 135 aa2.6□□□□□ -1.99
TMEM55B-204ENST00000553602 LCE1AQ5T7P2 110 aa2.6□□□□□ -1.99
TMEM55B-204ENST00000553602 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
TMEM55B-204ENST00000553602 ABCA13Q86UQ4 5058 aa2.59□□□□□ -1.99
TMEM55B-204ENST00000553602 HSPG2P98160 4391 aa2.59□□□□□ -1.99
TMEM55B-204ENST00000553602 MT1HL1P0DM35 61 aa2.59□□□□□ -1.99
TMEM55B-204ENST00000553602 APOBP04114 4563 aaKnown RBP2.58□□□□□ -2
TMEM55B-204ENST00000553602 KRTAP12-1P59990 96 aa2.58□□□□□ -2
TMEM55B-204ENST00000553602 A0A0D9SG42 100 aa2.57□□□□□ -2
TMEM55B-204ENST00000553602 NDUFAF8A1L188 74 aa2.57□□□□□ -2
TMEM55B-204ENST00000553602 KRTAP12-2P59991 146 aa2.56□□□□□ -2
TMEM55B-204ENST00000553602 CRIPTQ9P021 101 aa2.56□□□□□ -2
TMEM55B-204ENST00000553602 MT3P25713 68 aa2.54□□□□□ -2
TMEM55B-204ENST00000553602 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
TMEM55B-204ENST00000553602 TNXBP22105 4242 aa2.51□□□□□ -2.01
TMEM55B-204ENST00000553602 FAT1Q14517 4588 aa2.49□□□□□ -2.01
TMEM55B-204ENST00000553602 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
TMEM55B-204ENST00000553602 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
TMEM55B-204ENST00000553602 R4GN34 69 aa2.47□□□□□ -2.01
TMEM55B-204ENST00000553602 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
TMEM55B-204ENST00000553602 HERC1Q15751 4861 aa2.45□□□□□ -2.02
TMEM55B-204ENST00000553602 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
TMEM55B-204ENST00000553602 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
TMEM55B-204ENST00000553602 KRTAP19-2Q3LHN2 52 aa2.41□□□□□ -2.02
TMEM55B-204ENST00000553602 HMCN2Q8NDA2 5059 aa2.38□□□□□ -2.03
TMEM55B-204ENST00000553602 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
TMEM55B-204ENST00000553602 KRTAP2-2Q9BYT5 123 aa2.37□□□□□ -2.03
TMEM55B-204ENST00000553602 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
TMEM55B-204ENST00000553602 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
TMEM55B-204ENST00000553602 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
TMEM55B-204ENST00000553602 LRP2P98164 4655 aa2.33□□□□□ -2.04
TMEM55B-204ENST00000553602 TNP1P09430 55 aa2.31□□□□□ -2.04
TMEM55B-204ENST00000553602 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
TMEM55B-204ENST00000553602 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
TMEM55B-204ENST00000553602 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
TMEM55B-204ENST00000553602 SPRR2GQ9BYE4 73 aa2.27□□□□□ -2.05
TMEM55B-204ENST00000553602 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
TMEM55B-204ENST00000553602 LPAP08519 4548 aa2.24□□□□□ -2.05
TMEM55B-204ENST00000553602 MUC17Q685J3 4493 aa2.22□□□□□ -2.05
TMEM55B-204ENST00000553602 KRTAP10-7P60409 375 aaPredicted RBP2.2□□□□□ -2.06
TMEM55B-204ENST00000553602 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
TMEM55B-204ENST00000553602 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
TMEM55B-204ENST00000553602 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
TMEM55B-204ENST00000553602 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
TMEM55B-204ENST00000553602 MUC2Q02817 5179 aa2.15□□□□□ -2.06
TMEM55B-204ENST00000553602 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
TMEM55B-204ENST00000553602 MT1HP80294 61 aa2.15□□□□□ -2.07
TMEM55B-204ENST00000553602 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
TMEM55B-204ENST00000553602 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms