RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CRIPTQ9P021 101 aa5.67□□□□□ -1.5
LINC00643-202ENST00000553426 KMT2DO14686 5537 aa5.67□□□□□ -1.5
LINC00643-202ENST00000553426 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
LINC00643-202ENST00000553426 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
LINC00643-202ENST00000553426 ACYP1P07311 99 aa5.62□□□□□ -1.51
LINC00643-202ENST00000553426 NDUFC1O43677 76 aa5.61□□□□□ -1.51
LINC00643-202ENST00000553426 ATOX1O00244 68 aa5.6□□□□□ -1.51
LINC00643-202ENST00000553426 A0A087WVE0 104 aa5.59□□□□□ -1.51
LINC00643-202ENST00000553426 UQCRQO14949 82 aa5.59□□□□□ -1.51
LINC00643-202ENST00000553426 HIST1H4AP62805 103 aaKnown RBP5.59□□□□□ -1.51
LINC00643-202ENST00000553426 ATP5EP2Q5VTU8 51 aa5.59□□□□□ -1.51
LINC00643-202ENST00000553426 H0Y9P7 68 aa5.57□□□□□ -1.52
LINC00643-202ENST00000553426 PCP4L1A6NKN8 68 aa5.56□□□□□ -1.52
LINC00643-202ENST00000553426 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
LINC00643-202ENST00000553426 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
LINC00643-202ENST00000553426 A8MUN3 132 aa5.54□□□□□ -1.52
LINC00643-202ENST00000553426 H0YAA0 97 aa5.54□□□□□ -1.52
LINC00643-202ENST00000553426 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
LINC00643-202ENST00000553426 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
LINC00643-202ENST00000553426 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
LINC00643-202ENST00000553426 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
LINC00643-202ENST00000553426 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
LINC00643-202ENST00000553426 MP68P56378 58 aa5.46□□□□□ -1.54
LINC00643-202ENST00000553426 LINC00643Q86TS7 51 aa5.45□□□□□ -1.54
LINC00643-202ENST00000553426 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
LINC00643-202ENST00000553426 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
LINC00643-202ENST00000553426 R4GN34 69 aa5.4□□□□□ -1.54
LINC00643-202ENST00000553426 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
LINC00643-202ENST00000553426 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
LINC00643-202ENST00000553426 H3BPC8 53 aa5.34□□□□□ -1.55
LINC00643-202ENST00000553426 MT1XP80297 61 aa5.34□□□□□ -1.55
LINC00643-202ENST00000553426 M0QZ58 72 aa5.33□□□□□ -1.56
LINC00643-202ENST00000553426 SPRR2EP22531 72 aa5.31□□□□□ -1.56
LINC00643-202ENST00000553426 SPRR2BP35325 72 aa5.31□□□□□ -1.56
LINC00643-202ENST00000553426 SPRR2AP35326 72 aa5.31□□□□□ -1.56
LINC00643-202ENST00000553426 P0C880 135 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 DMAC1Q96GE9 116 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
LINC00643-202ENST00000553426 J3QR89 54 aa5.28□□□□□ -1.56
LINC00643-202ENST00000553426 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
LINC00643-202ENST00000553426 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
LINC00643-202ENST00000553426 TRAV7A0A075B6U4 112 aa5.21□□□□□ -1.58
LINC00643-202ENST00000553426 A0A1B0GV90 55 aa5.21□□□□□ -1.58
LINC00643-202ENST00000553426 ACYP2P14621 99 aa5.19□□□□□ -1.58
LINC00643-202ENST00000553426 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
LINC00643-202ENST00000553426 SPTSSBQ8NFR3 76 aa5.19□□□□□ -1.58
LINC00643-202ENST00000553426 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
LINC00643-202ENST00000553426 MT-ATP8P03928 68 aa5.17□□□□□ -1.58
LINC00643-202ENST00000553426 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
LINC00643-202ENST00000553426 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
LINC00643-202ENST00000553426 SPRR2DP22532 72 aa5.13□□□□□ -1.59
LINC00643-202ENST00000553426 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
LINC00643-202ENST00000553426 SMIM20Q8N5G0 67 aa5.11□□□□□ -1.59
LINC00643-202ENST00000553426 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
LINC00643-202ENST00000553426 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
LINC00643-202ENST00000553426 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
LINC00643-202ENST00000553426 K7ERU9 68 aa4.98□□□□□ -1.61
LINC00643-202ENST00000553426 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
LINC00643-202ENST00000553426 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
LINC00643-202ENST00000553426 SPANXA2-OT1Q8N9U9 137 aa4.95□□□□□ -1.62
LINC00643-202ENST00000553426 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
LINC00643-202ENST00000553426 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
LINC00643-202ENST00000553426 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
LINC00643-202ENST00000553426 KRTAP13-4Q3LI77 160 aa4.88□□□□□ -1.63
LINC00643-202ENST00000553426 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
LINC00643-202ENST00000553426 SEC61GP60059 68 aa4.86□□□□□ -1.63
LINC00643-202ENST00000553426 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
LINC00643-202ENST00000553426 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
LINC00643-202ENST00000553426 COA5Q86WW8 74 aa4.82□□□□□ -1.64
LINC00643-202ENST00000553426 A0A0D9SG42 100 aa4.79□□□□□ -1.64
LINC00643-202ENST00000553426 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
LINC00643-202ENST00000553426 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
LINC00643-202ENST00000553426 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
LINC00643-202ENST00000553426 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
LINC00643-202ENST00000553426 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
LINC00643-202ENST00000553426 MT1EP04732 61 aa4.74□□□□□ -1.65
LINC00643-202ENST00000553426 A0A1B0GU33 70 aa4.73□□□□□ -1.65
LINC00643-202ENST00000553426 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
LINC00643-202ENST00000553426 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
LINC00643-202ENST00000553426 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
LINC00643-202ENST00000553426 CYSTM1Q9H1C7 97 aa4.67□□□□□ -1.66
LINC00643-202ENST00000553426 COX7CP15954 63 aa4.66□□□□□ -1.66
LINC00643-202ENST00000553426 MT1GP13640 62 aa4.65□□□□□ -1.67
LINC00643-202ENST00000553426 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
LINC00643-202ENST00000553426 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
LINC00643-202ENST00000553426 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
LINC00643-202ENST00000553426 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
LINC00643-202ENST00000553426 A0A1B0GU69 56 aa4.6□□□□□ -1.67
LINC00643-202ENST00000553426 H7BZZ5 65 aa4.6□□□□□ -1.67
LINC00643-202ENST00000553426 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
LINC00643-202ENST00000553426 MT4P47944 62 aa4.55□□□□□ -1.68
LINC00643-202ENST00000553426 TNP1P09430 55 aa4.53□□□□□ -1.68
LINC00643-202ENST00000553426 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
LINC00643-202ENST00000553426 MT1MQ8N339 61 aa4.53□□□□□ -1.68
LINC00643-202ENST00000553426 MT1LQ93083 61 aa4.52□□□□□ -1.69
LINC00643-202ENST00000553426 A8MU10 97 aa4.51□□□□□ -1.69
LINC00643-202ENST00000553426 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms