RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
PFDN5-219ENST00000553171 SPART-AS1P0CW21 52 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 DEFB130BP0DP73 79 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 DEFB130AP0DP74 79 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 RPL37AP61513 92 aaKnown RBP2.88□□□□□ -1.95
PFDN5-219ENST00000553171 UNQ6190/PRO20217Q6UXQ8 127 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 Q96NJ1 140 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 FAT3Q8TDW7 4589 aa2.88□□□□□ -1.95
PFDN5-219ENST00000553171 A0A1W2PNN7 141 aa2.86□□□□□ -1.95
PFDN5-219ENST00000553171 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
PFDN5-219ENST00000553171 C6orf48Q9UBA6 75 aa2.86□□□□□ -1.95
PFDN5-219ENST00000553171 PSORS1C2Q9UIG4 136 aa2.86□□□□□ -1.95
PFDN5-219ENST00000553171 ACYP2P14621 99 aa2.85□□□□□ -1.95
PFDN5-219ENST00000553171 TP53AIP1Q9HCN2 124 aa2.85□□□□□ -1.95
PFDN5-219ENST00000553171 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
PFDN5-219ENST00000553171 FAM168BA1KXE4 195 aa2.84□□□□□ -1.95
PFDN5-219ENST00000553171 SMR3BP02814 79 aaPredicted RBP2.84□□□□□ -1.95
PFDN5-219ENST00000553171 DSCR10P59022 87 aa2.84□□□□□ -1.95
PFDN5-219ENST00000553171 CLPSL2Q6UWE3 100 aa2.84□□□□□ -1.95
PFDN5-219ENST00000553171 Q6ZRX8 168 aa2.84□□□□□ -1.95
PFDN5-219ENST00000553171 APLNQ9ULZ1 77 aa2.84□□□□□ -1.95
PFDN5-219ENST00000553171 A0A0G2JQZ4 141 aa2.83□□□□□ -1.96
PFDN5-219ENST00000553171 SPRR1AP35321 89 aa2.83□□□□□ -1.96
PFDN5-219ENST00000553171 LINC00304Q8N9R0 145 aa2.83□□□□□ -1.96
PFDN5-219ENST00000553171 TNXBP22105 4242 aa2.82□□□□□ -1.96
PFDN5-219ENST00000553171 A0A096LPF7 62 aa2.82□□□□□ -1.96
PFDN5-219ENST00000553171 K7EQZ3 153 aa2.82□□□□□ -1.96
PFDN5-219ENST00000553171 LINC01556Q5JQF7 62 aa2.82□□□□□ -1.96
PFDN5-219ENST00000553171 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
PFDN5-219ENST00000553171 SSBP3-AS1Q7Z2R9 100 aa2.81□□□□□ -1.96
PFDN5-219ENST00000553171 DEFB105AQ8NG35 78 aa2.78□□□□□ -1.96
PFDN5-219ENST00000553171 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 SPRR1BP22528 89 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 DEFB135Q30KP9 77 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 TYMSOSQ8TAI1 123 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 R4GN34 69 aa2.77□□□□□ -1.97
PFDN5-219ENST00000553171 C14orf177Q52M58 125 aa2.76□□□□□ -1.97
PFDN5-219ENST00000553171 WFDC10BQ8IUB3 73 aa2.76□□□□□ -1.97
PFDN5-219ENST00000553171 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
PFDN5-219ENST00000553171 HTN3P15516 51 aa2.75□□□□□ -1.97
PFDN5-219ENST00000553171 PCOTHQ58A44 107 aa2.75□□□□□ -1.97
PFDN5-219ENST00000553171 IGFL1Q6UW32 110 aa2.75□□□□□ -1.97
PFDN5-219ENST00000553171 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PFDN5-219ENST00000553171 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
PFDN5-219ENST00000553171 NEBP20929 6669 aa2.73□□□□□ -1.97
PFDN5-219ENST00000553171 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
PFDN5-219ENST00000553171 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
PFDN5-219ENST00000553171 LPAP08519 4548 aa2.7□□□□□ -1.98
PFDN5-219ENST00000553171 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
PFDN5-219ENST00000553171 DEFB4AO15263 64 aa2.7□□□□□ -1.98
PFDN5-219ENST00000553171 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
PFDN5-219ENST00000553171 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
PFDN5-219ENST00000553171 INE1O15225 51 aa2.69□□□□□ -1.98
PFDN5-219ENST00000553171 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
PFDN5-219ENST00000553171 PLAC4Q8WY50 150 aa2.69□□□□□ -1.98
PFDN5-219ENST00000553171 USH2AO75445 5202 aa2.69□□□□□ -1.98
PFDN5-219ENST00000553171 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
PFDN5-219ENST00000553171 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
PFDN5-219ENST00000553171 MRPL34Q9BQ48 92 aaKnown RBP2.67□□□□□ -1.98
PFDN5-219ENST00000553171 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
PFDN5-219ENST00000553171 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
PFDN5-219ENST00000553171 KRTAP7-1Q8IUC3 87 aa2.65□□□□□ -1.99
PFDN5-219ENST00000553171 H0YAA0 97 aa2.64□□□□□ -1.99
PFDN5-219ENST00000553171 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
PFDN5-219ENST00000553171 UBE2DNLQ8IWF7 75 aa2.64□□□□□ -1.99
PFDN5-219ENST00000553171 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
PFDN5-219ENST00000553171 A0A096LNI7 61 aa2.63□□□□□ -1.99
PFDN5-219ENST00000553171 PRLHP81277 87 aa2.63□□□□□ -1.99
PFDN5-219ENST00000553171 KRTAP13-1Q8IUC0 172 aa2.62□□□□□ -1.99
PFDN5-219ENST00000553171 DNAH8Q96JB1 4490 aa2.62□□□□□ -1.99
PFDN5-219ENST00000553171 Q6ZRN7 208 aaPredicted RBP2.59□□□□□ -1.99
PFDN5-219ENST00000553171 Q6ZSA8 131 aa2.59□□□□□ -1.99
PFDN5-219ENST00000553171 KRTAP3-1Q9BYR8 98 aa2.59□□□□□ -1.99
PFDN5-219ENST00000553171 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
PFDN5-219ENST00000553171 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
PFDN5-219ENST00000553171 H1FX-AS1Q4G0G2 97 aa2.57□□□□□ -2
PFDN5-219ENST00000553171 KRTAP1-5Q9BYS1 174 aa2.57□□□□□ -2
PFDN5-219ENST00000553171 IGKV2-30P06310 120 aa2.56□□□□□ -2
PFDN5-219ENST00000553171 KMT2DO14686 5537 aa2.55□□□□□ -2
PFDN5-219ENST00000553171 RPL37P61927 97 aaKnown RBP2.54□□□□□ -2
PFDN5-219ENST00000553171 KRTAP12-2P59991 146 aa2.53□□□□□ -2
PFDN5-219ENST00000553171 IGKV2D-30A0A075B6S6 120 aa2.52□□□□□ -2.01
PFDN5-219ENST00000553171 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
PFDN5-219ENST00000553171 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
PFDN5-219ENST00000553171 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
PFDN5-219ENST00000553171 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
PFDN5-219ENST00000553171 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
PFDN5-219ENST00000553171 RPS29P62273 56 aaKnown RBP2.49□□□□□ -2.01
PFDN5-219ENST00000553171 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
PFDN5-219ENST00000553171 SPINK6Q6UWN8 80 aa2.48□□□□□ -2.01
PFDN5-219ENST00000553171 SPINK1P00995 79 aa2.47□□□□□ -2.01
PFDN5-219ENST00000553171 KRTAP10-7P60409 375 aaPredicted RBP2.47□□□□□ -2.01
PFDN5-219ENST00000553171 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
PFDN5-219ENST00000553171 MUC17Q685J3 4493 aa2.41□□□□□ -2.02
PFDN5-219ENST00000553171 KRTAP1-4P0C5Y4 121 aa2.4□□□□□ -2.03
PFDN5-219ENST00000553171 MT1HP80294 61 aa2.4□□□□□ -2.03
PFDN5-219ENST00000553171 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
PFDN5-219ENST00000553171 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
PFDN5-219ENST00000553171 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms