RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
NPAS3-212ENST00000552696 ANKRD11Q6UB99 2663 aaPredicted RBP0.73□□□□□ -2.29
NPAS3-212ENST00000552696 SZT2Q5T011 3432 aa0.73□□□□□ -2.29
NPAS3-212ENST00000552696 BSNQ9UPA5 3926 aa0.73□□□□□ -2.29
NPAS3-212ENST00000552696 GCN1Q92616 2671 aaKnown RBP0.73□□□□□ -2.29
NPAS3-212ENST00000552696 EP400Q96L91 3159 aa0.73□□□□□ -2.29
NPAS3-212ENST00000552696 HIVEP1P15822 2718 aa0.73□□□□□ -2.29
NPAS3-212ENST00000552696 SMG1Q96Q15 3661 aaKnown RBP0.73□□□□□ -2.29
NPAS3-212ENST00000552696 FREM2Q5SZK8 3169 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 MYO9AB2RTY4 2548 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 LYSTQ99698 3801 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 COL7A1Q02388 2944 aa0.72□□□□□ -2.29
NPAS3-212ENST00000552696 FASNP49327 2511 aaKnown RBP0.72□□□□□ -2.29
NPAS3-212ENST00000552696 HRNRQ86YZ3 2850 aaPredicted RBP0.71□□□□□ -2.3
NPAS3-212ENST00000552696 MXRA5Q9NR99 2828 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 DEFB4AO15263 64 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 UNC79Q9P2D8 2635 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 USP34Q70CQ2 3546 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 SPEGQ15772 3267 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 XIRP2A4UGR9 3374 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 CSMD3Q7Z407 3707 aa0.71□□□□□ -2.3
NPAS3-212ENST00000552696 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 PDZD2O15018 2839 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 VPS13BQ7Z7G8 4022 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 TRRAPQ9Y4A5 3859 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
NPAS3-212ENST00000552696 NOTCH1P46531 2555 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 ACACBO00763 2458 aa0.7□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH2Q9P225 4427 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 RELNP78509 3460 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 ANK2Q01484 3957 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 CMYA5Q8N3K9 4069 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 PKD1L1Q8TDX9 2849 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 SPENQ96T58 3664 aaKnown RBP0.69□□□□□ -2.3
NPAS3-212ENST00000552696 MUC3AQ02505 3323 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 LAMA3Q16787 3333 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 M0R2T5 61 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH8Q96JB1 4490 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 STAB1Q9NY15 2570 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 LAMA5O15230 3695 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
NPAS3-212ENST00000552696 DYNC2H1Q8NCM8 4307 aaKnown RBP0.68□□□□□ -2.3
NPAS3-212ENST00000552696 PRKDCP78527 4128 aaKnown RBP0.68□□□□□ -2.3
NPAS3-212ENST00000552696 FLGP20930 4061 aaPredicted RBP0.68□□□□□ -2.3
NPAS3-212ENST00000552696 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 ASPMQ8IZT6 3477 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 STAB2Q8WWQ8 2551 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH1Q9P2D7 4330 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 NSD1Q96L73 2696 aaPredicted RBP0.68□□□□□ -2.3
NPAS3-212ENST00000552696 LOC400499M0QZD8 3231 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 TENM4Q6N022 2769 aa0.68□□□□□ -2.3
NPAS3-212ENST00000552696 FBN2P35556 2912 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 UNC80Q8N2C7 3258 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 SACSQ9NZJ4 4579 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH6Q9C0G6 4158 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 KMT2AQ03164 3969 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 HECTD4Q9Y4D8 3996 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 CSMD1Q96PZ7 3565 aa0.67□□□□□ -2.3
NPAS3-212ENST00000552696 ZNF469Q96JG9 3925 aaPredicted RBP0.67□□□□□ -2.3
NPAS3-212ENST00000552696 FLNBO75369 2602 aaKnown RBP0.67□□□□□ -2.3
NPAS3-212ENST00000552696 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
NPAS3-212ENST00000552696 MGAM2Q2M2H8 2515 aa0.66□□□□□ -2.3
NPAS3-212ENST00000552696 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
NPAS3-212ENST00000552696 FLNAP21333 2647 aaKnown RBP0.66□□□□□ -2.3
NPAS3-212ENST00000552696 ADGRG4Q8IZF6 3080 aa0.66□□□□□ -2.3
NPAS3-212ENST00000552696 VPS13CQ709C8 3753 aa0.65□□□□□ -2.31
NPAS3-212ENST00000552696 MYCBP2O75592 4640 aa0.65□□□□□ -2.31
NPAS3-212ENST00000552696 HUWE1Q7Z6Z7 4374 aaKnown RBP0.65□□□□□ -2.31
NPAS3-212ENST00000552696 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
NPAS3-212ENST00000552696 DNAH14Q0VDD8 3507 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 PKD1P98161 4303 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 MAST4O15021 2626 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 ANK3Q12955 4377 aaKnown RBP0.64□□□□□ -2.31
NPAS3-212ENST00000552696 BRCA2P51587 3418 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 DNAH10Q8IVF4 4471 aa0.64□□□□□ -2.31
NPAS3-212ENST00000552696 PKHD1L1Q86WI1 4243 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 SMR3AQ99954 134 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 HSPG2P98160 4391 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 MYO15AQ9UKN7 3530 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 VCANP13611 3396 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
NPAS3-212ENST00000552696 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
NPAS3-212ENST00000552696 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
NPAS3-212ENST00000552696 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
NPAS3-212ENST00000552696 KRTAP8-1Q8IUC2 63 aa0.61□□□□□ -2.31
NPAS3-212ENST00000552696 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
NPAS3-212ENST00000552696 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
NPAS3-212ENST00000552696 CDH23Q9H251 3354 aa0.61□□□□□ -2.31
NPAS3-212ENST00000552696 APOBP04114 4563 aaKnown RBP0.6□□□□□ -2.31
NPAS3-212ENST00000552696 EYSQ5T1H1 3165 aa0.6□□□□□ -2.31
NPAS3-212ENST00000552696 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
NPAS3-212ENST00000552696 FAT3Q8TDW7 4589 aa0.6□□□□□ -2.31
NPAS3-212ENST00000552696 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms