RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
HCFC2-206ENST00000552343 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 LPAP08519 4548 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 H3BUA1 57 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 DEFB4AO15263 64 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 NREPQ16612 68 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 SMIM11BQ8TCY0 68 aa1.72□□□□□ -2.13
HCFC2-206ENST00000552343 DEFB131BA0A096LNP1 70 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 LINC00959A0A1B0GUT2 108 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 LINC01549A6NIU2 74 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 NCR3O14931 201 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 MT1HL1P0DM35 61 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 HAMPP81172 84 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 USMG5Q96IX5 58 aa1.71□□□□□ -2.14
HCFC2-206ENST00000552343 A0A1B0GU69 56 aa1.7□□□□□ -2.14
HCFC2-206ENST00000552343 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
HCFC2-206ENST00000552343 KLK9Q2XQG4 91 aa1.7□□□□□ -2.14
HCFC2-206ENST00000552343 LELP1Q5T871 98 aa1.7□□□□□ -2.14
HCFC2-206ENST00000552343 DEFB104AQ8WTQ1 72 aa1.7□□□□□ -2.14
HCFC2-206ENST00000552343 TRBV6-1A0A0K0K1D8 114 aa1.69□□□□□ -2.14
HCFC2-206ENST00000552343 NDUFB1O75438 58 aa1.69□□□□□ -2.14
HCFC2-206ENST00000552343 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
HCFC2-206ENST00000552343 FXYD6Q9H0Q3 95 aa1.69□□□□□ -2.14
HCFC2-206ENST00000552343 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
HCFC2-206ENST00000552343 PRH1P02810 166 aa1.67□□□□□ -2.14
HCFC2-206ENST00000552343 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
HCFC2-206ENST00000552343 LINC00575Q6W349 94 aa1.67□□□□□ -2.14
HCFC2-206ENST00000552343 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
HCFC2-206ENST00000552343 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
HCFC2-206ENST00000552343 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
HCFC2-206ENST00000552343 PIGYQ3MUY2 71 aa1.66□□□□□ -2.14
HCFC2-206ENST00000552343 RPL39P5Q59GN2 51 aa1.66□□□□□ -2.14
HCFC2-206ENST00000552343 Q6ZSA8 131 aa1.66□□□□□ -2.14
HCFC2-206ENST00000552343 SPART-AS1P0CW21 52 aa1.65□□□□□ -2.15
HCFC2-206ENST00000552343 APELAP0DMC3 54 aa1.65□□□□□ -2.15
HCFC2-206ENST00000552343 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
HCFC2-206ENST00000552343 ENHOQ6UWT2 76 aa1.65□□□□□ -2.15
HCFC2-206ENST00000552343 SNRPGP15A8MWD9 76 aa1.64□□□□□ -2.15
HCFC2-206ENST00000552343 TTTY10Q9BZA0 68 aa1.64□□□□□ -2.15
HCFC2-206ENST00000552343 NDUFA4O00483 81 aa1.63□□□□□ -2.15
HCFC2-206ENST00000552343 COX7BP24311 80 aa1.63□□□□□ -2.15
HCFC2-206ENST00000552343 DEFB131AP59861 70 aa1.63□□□□□ -2.15
HCFC2-206ENST00000552343 RHPN1-AS1Q9BWJ2 59 aa1.63□□□□□ -2.15
HCFC2-206ENST00000552343 K7EMI3 77 aa1.62□□□□□ -2.15
HCFC2-206ENST00000552343 HTN3P15516 51 aa1.61□□□□□ -2.15
HCFC2-206ENST00000552343 FCER1GP30273 86 aa1.61□□□□□ -2.15
HCFC2-206ENST00000552343 H3BNG1 76 aa1.6□□□□□ -2.15
HCFC2-206ENST00000552343 K7EIM0 57 aa1.6□□□□□ -2.15
HCFC2-206ENST00000552343 SNRPGP62308 76 aaKnown RBP1.6□□□□□ -2.15
HCFC2-206ENST00000552343 TMEM167AQ8TBQ9 72 aa1.6□□□□□ -2.15
HCFC2-206ENST00000552343 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
HCFC2-206ENST00000552343 A8MTW9 85 aa1.59□□□□□ -2.15
HCFC2-206ENST00000552343 A0A096LPF7 62 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 I3L2K1 104 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 ARL14EPLP0DKL9 152 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 WT1-ASQ06250 92 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 ABRACLQ9P1F3 81 aa1.58□□□□□ -2.16
HCFC2-206ENST00000552343 DEFB130BP0DP73 79 aa1.57□□□□□ -2.16
HCFC2-206ENST00000552343 DEFB130AP0DP74 79 aa1.57□□□□□ -2.16
HCFC2-206ENST00000552343 DEFB1P60022 68 aa1.57□□□□□ -2.16
HCFC2-206ENST00000552343 CRIPTQ9P021 101 aa1.56□□□□□ -2.16
HCFC2-206ENST00000552343 TIMM8BQ9Y5J9 83 aaPredicted RBP1.55□□□□□ -2.16
HCFC2-206ENST00000552343 WFDC10BQ8IUB3 73 aa1.54□□□□□ -2.16
HCFC2-206ENST00000552343 ARHGAP5-AS1Q96IT6 56 aa1.54□□□□□ -2.16
HCFC2-206ENST00000552343 NOP10Q9NPE3 64 aaKnown RBP1.54□□□□□ -2.16
HCFC2-206ENST00000552343 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
HCFC2-206ENST00000552343 SSPOA2VEC9 5147 aa1.53□□□□□ -2.17
HCFC2-206ENST00000552343 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
HCFC2-206ENST00000552343 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
HCFC2-206ENST00000552343 PRCDQ00LT1 54 aa1.51□□□□□ -2.17
HCFC2-206ENST00000552343 PRO0255Q9UI72 69 aa1.51□□□□□ -2.17
HCFC2-206ENST00000552343 USH2AO75445 5202 aa1.51□□□□□ -2.17
HCFC2-206ENST00000552343 SPINK4O60575 86 aa1.5□□□□□ -2.17
HCFC2-206ENST00000552343 SPINK6Q6UWN8 80 aa1.5□□□□□ -2.17
HCFC2-206ENST00000552343 TOMM5Q8N4H5 51 aa1.5□□□□□ -2.17
HCFC2-206ENST00000552343 KCNQ1DNQ9H478 68 aa1.5□□□□□ -2.17
HCFC2-206ENST00000552343 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
HCFC2-206ENST00000552343 HTN1P15515 57 aa1.49□□□□□ -2.17
HCFC2-206ENST00000552343 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
HCFC2-206ENST00000552343 TP53AIP1Q9HCN2 124 aa1.49□□□□□ -2.17
HCFC2-206ENST00000552343 ETDCA0A1B0GVM5 59 aa1.48□□□□□ -2.17
HCFC2-206ENST00000552343 IGIPA6NJ69 53 aa1.48□□□□□ -2.17
HCFC2-206ENST00000552343 NMES1Q9C002 83 aa1.48□□□□□ -2.17
HCFC2-206ENST00000552343 I3L3M4 83 aa1.47□□□□□ -2.17
HCFC2-206ENST00000552343 K7EQZ3 153 aa1.47□□□□□ -2.17
HCFC2-206ENST00000552343 SPINK9Q5DT21 86 aa1.47□□□□□ -2.17
HCFC2-206ENST00000552343 C10orf95Q9H7T3 257 aa1.47□□□□□ -2.17
HCFC2-206ENST00000552343 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
HCFC2-206ENST00000552343 MT1HP80294 61 aa1.46□□□□□ -2.18
HCFC2-206ENST00000552343 CRIP1P50238 77 aa1.45□□□□□ -2.18
HCFC2-206ENST00000552343 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
HCFC2-206ENST00000552343 NEBP20929 6669 aa1.42□□□□□ -2.18
HCFC2-206ENST00000552343 PLNP26678 52 aa1.42□□□□□ -2.18
HCFC2-206ENST00000552343 SERF2P84101 59 aa1.42□□□□□ -2.18
HCFC2-206ENST00000552343 COX6A2Q02221 97 aa1.41□□□□□ -2.18
HCFC2-206ENST00000552343 A0A096LNI7 61 aa1.4□□□□□ -2.19
HCFC2-206ENST00000552343 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
HCFC2-206ENST00000552343 CNFNQ9BYD5 112 aa1.4□□□□□ -2.19
HCFC2-206ENST00000552343 CDKN2A-AS1Q9UH64 79 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms