RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 HIST1H4AP62805 103 aaKnown RBP9.13□□□□□ -0.95
SLC48A1-208ENST00000551301 ATOX1O00244 68 aa9.1□□□□□ -0.95
SLC48A1-208ENST00000551301 UQCRQO14949 82 aa9.09□□□□□ -0.95
SLC48A1-208ENST00000551301 KRTAP19-8Q3LI54 63 aa9.09□□□□□ -0.95
SLC48A1-208ENST00000551301 MT1BP07438 61 aa9.07□□□□□ -0.96
SLC48A1-208ENST00000551301 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
SLC48A1-208ENST00000551301 LINC00643Q86TS7 51 aa9.06□□□□□ -0.96
SLC48A1-208ENST00000551301 H0Y9P7 68 aa9.04□□□□□ -0.96
SLC48A1-208ENST00000551301 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
SLC48A1-208ENST00000551301 J3QR89 54 aa9.03□□□□□ -0.96
SLC48A1-208ENST00000551301 NDUFC1O43677 76 aa9.03□□□□□ -0.96
SLC48A1-208ENST00000551301 A0A087WVE0 104 aa8.99□□□□□ -0.97
SLC48A1-208ENST00000551301 A8MUN3 132 aa8.95□□□□□ -0.98
SLC48A1-208ENST00000551301 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
SLC48A1-208ENST00000551301 H0YAA0 97 aa8.91□□□□□ -0.98
SLC48A1-208ENST00000551301 LINC00208Q96KT6 92 aa8.9□□□□□ -0.98
SLC48A1-208ENST00000551301 MP68P56378 58 aa8.89□□□□□ -0.99
SLC48A1-208ENST00000551301 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
SLC48A1-208ENST00000551301 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
SLC48A1-208ENST00000551301 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
SLC48A1-208ENST00000551301 NEBP20929 6669 aa8.8□□□□□ -1
SLC48A1-208ENST00000551301 OCR1Q9BZK8 76 aa8.8□□□□□ -1
SLC48A1-208ENST00000551301 K7ERU9 68 aa8.78□□□□□ -1
SLC48A1-208ENST00000551301 H3BPC8 53 aa8.72□□□□□ -1.01
SLC48A1-208ENST00000551301 C20orf197Q8N268 126 aa8.71□□□□□ -1.02
SLC48A1-208ENST00000551301 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.02
SLC48A1-208ENST00000551301 SCGB1A1P11684 91 aa8.7□□□□□ -1.02
SLC48A1-208ENST00000551301 MUC12Q9UKN1 5478 aa8.68□□□□□ -1.02
SLC48A1-208ENST00000551301 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
SLC48A1-208ENST00000551301 KRTAP5-9P26371 169 aa8.66□□□□□ -1.02
SLC48A1-208ENST00000551301 R4GN34 69 aa8.66□□□□□ -1.02
SLC48A1-208ENST00000551301 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
SLC48A1-208ENST00000551301 DMAC1Q96GE9 116 aa8.6□□□□□ -1.03
SLC48A1-208ENST00000551301 M0QZ58 72 aa8.55□□□□□ -1.04
SLC48A1-208ENST00000551301 KRTAP20-1Q3LI63 56 aa8.55□□□□□ -1.04
SLC48A1-208ENST00000551301 P0C880 135 aa8.54□□□□□ -1.04
SLC48A1-208ENST00000551301 KMT2DO14686 5537 aa8.53□□□□□ -1.04
SLC48A1-208ENST00000551301 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
SLC48A1-208ENST00000551301 MT1XP80297 61 aa8.5□□□□□ -1.05
SLC48A1-208ENST00000551301 TRAV7A0A075B6U4 112 aa8.47□□□□□ -1.05
SLC48A1-208ENST00000551301 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
SLC48A1-208ENST00000551301 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
SLC48A1-208ENST00000551301 ACYP2P14621 99 aa8.45□□□□□ -1.06
SLC48A1-208ENST00000551301 SPTSSBQ8NFR3 76 aa8.44□□□□□ -1.06
SLC48A1-208ENST00000551301 SPRR2FQ96RM1 72 aa8.43□□□□□ -1.06
SLC48A1-208ENST00000551301 KRTAP8-1Q8IUC2 63 aa8.39□□□□□ -1.07
SLC48A1-208ENST00000551301 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
SLC48A1-208ENST00000551301 SPRR2EP22531 72 aa8.33□□□□□ -1.08
SLC48A1-208ENST00000551301 SPRR2BP35325 72 aa8.33□□□□□ -1.08
SLC48A1-208ENST00000551301 SPRR2AP35326 72 aa8.33□□□□□ -1.08
SLC48A1-208ENST00000551301 CHKB-CPT1BH3BT56 60 aa8.32□□□□□ -1.08
SLC48A1-208ENST00000551301 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
SLC48A1-208ENST00000551301 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
SLC48A1-208ENST00000551301 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
SLC48A1-208ENST00000551301 SNURFQ9Y675 71 aa8.26□□□□□ -1.09
SLC48A1-208ENST00000551301 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
SLC48A1-208ENST00000551301 LCE1AQ5T7P2 110 aa8.15□□□□□ -1.1
SLC48A1-208ENST00000551301 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
SLC48A1-208ENST00000551301 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
SLC48A1-208ENST00000551301 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
SLC48A1-208ENST00000551301 KRTAP10-12P60413 245 aa8.09□□□□□ -1.11
SLC48A1-208ENST00000551301 COX7CP15954 63 aa8.08□□□□□ -1.12
SLC48A1-208ENST00000551301 SPRR2DP22532 72 aa8.07□□□□□ -1.12
SLC48A1-208ENST00000551301 KRTAP2-2Q9BYT5 123 aa8.03□□□□□ -1.12
SLC48A1-208ENST00000551301 KRTAP2-1Q9BYU5 128 aa8.03□□□□□ -1.12
SLC48A1-208ENST00000551301 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
SLC48A1-208ENST00000551301 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
SLC48A1-208ENST00000551301 SEC61GP60059 68 aa7.92□□□□□ -1.14
SLC48A1-208ENST00000551301 KRTAP13-4Q3LI77 160 aa7.89□□□□□ -1.15
SLC48A1-208ENST00000551301 COA5Q86WW8 74 aa7.89□□□□□ -1.15
SLC48A1-208ENST00000551301 H7BZZ5 65 aa7.88□□□□□ -1.15
SLC48A1-208ENST00000551301 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
SLC48A1-208ENST00000551301 CYSTM1Q9H1C7 97 aa7.85□□□□□ -1.15
SLC48A1-208ENST00000551301 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
SLC48A1-208ENST00000551301 A0A0D9SG42 100 aa7.76□□□□□ -1.17
SLC48A1-208ENST00000551301 CCDC179H3BU77 68 aa7.73□□□□□ -1.17
SLC48A1-208ENST00000551301 A0A1B0GU33 70 aa7.7□□□□□ -1.18
SLC48A1-208ENST00000551301 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
SLC48A1-208ENST00000551301 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
SLC48A1-208ENST00000551301 ATP5EP56381 51 aaPredicted RBP7.63□□□□□ -1.19
SLC48A1-208ENST00000551301 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
SLC48A1-208ENST00000551301 MT1EP04732 61 aa7.56□□□□□ -1.2
SLC48A1-208ENST00000551301 LCE5AQ5TCM9 118 aa7.55□□□□□ -1.2
SLC48A1-208ENST00000551301 A0A1B0GU69 56 aa7.54□□□□□ -1.2
SLC48A1-208ENST00000551301 KRTAP19-3Q7Z4W3 81 aa7.54□□□□□ -1.2
SLC48A1-208ENST00000551301 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
SLC48A1-208ENST00000551301 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
SLC48A1-208ENST00000551301 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
SLC48A1-208ENST00000551301 TMEM258P61165 79 aa7.5□□□□□ -1.21
SLC48A1-208ENST00000551301 KRTAP19-5Q3LI72 72 aa7.41□□□□□ -1.22
SLC48A1-208ENST00000551301 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
SLC48A1-208ENST00000551301 KRTAP9-9Q9BYP9 154 aa7.39□□□□□ -1.23
SLC48A1-208ENST00000551301 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
SLC48A1-208ENST00000551301 MT1GP13640 62 aa7.38□□□□□ -1.23
SLC48A1-208ENST00000551301 KRTAP4-12Q9BQ66 201 aa7.38□□□□□ -1.23
SLC48A1-208ENST00000551301 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
SLC48A1-208ENST00000551301 A8MU10 97 aa7.34□□□□□ -1.23
SLC48A1-208ENST00000551301 TNP1P09430 55 aa7.31□□□□□ -1.24
SLC48A1-208ENST00000551301 LINC01558Q9Y6Z2 57 aa7.31□□□□□ -1.24
SLC48A1-208ENST00000551301 GPR98Q8WXG9 6306 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms