RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
ERBB3-219ENST00000551242 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
ERBB3-219ENST00000551242 FAT1Q14517 4588 aa6.36□□□□□ -1.39
ERBB3-219ENST00000551242 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
ERBB3-219ENST00000551242 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
ERBB3-219ENST00000551242 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
ERBB3-219ENST00000551242 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
ERBB3-219ENST00000551242 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
ERBB3-219ENST00000551242 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
ERBB3-219ENST00000551242 RYR2Q92736 4967 aa6.24□□□□□ -1.41
ERBB3-219ENST00000551242 S4R3F8 94 aa6.24□□□□□ -1.41
ERBB3-219ENST00000551242 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
ERBB3-219ENST00000551242 MYCBP2O75592 4640 aa6.21□□□□□ -1.42
ERBB3-219ENST00000551242 APOBP04114 4563 aaKnown RBP6.2□□□□□ -1.42
ERBB3-219ENST00000551242 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
ERBB3-219ENST00000551242 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
ERBB3-219ENST00000551242 HSPG2P98160 4391 aa6.17□□□□□ -1.42
ERBB3-219ENST00000551242 RYR3Q15413 4870 aa6.16□□□□□ -1.42
ERBB3-219ENST00000551242 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
ERBB3-219ENST00000551242 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
ERBB3-219ENST00000551242 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
ERBB3-219ENST00000551242 FAT3Q8TDW7 4589 aa6.08□□□□□ -1.44
ERBB3-219ENST00000551242 XP32Q5T750 250 aa6.07□□□□□ -1.44
ERBB3-219ENST00000551242 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
ERBB3-219ENST00000551242 LPAP08519 4548 aa6.02□□□□□ -1.45
ERBB3-219ENST00000551242 Q5VSD8 79 aa6.01□□□□□ -1.45
ERBB3-219ENST00000551242 A0A0A0MQY5 61 aa6□□□□□ -1.45
ERBB3-219ENST00000551242 TNXBP22105 4242 aa5.98□□□□□ -1.45
ERBB3-219ENST00000551242 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
ERBB3-219ENST00000551242 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
ERBB3-219ENST00000551242 RYR1P21817 5038 aa5.93□□□□□ -1.46
ERBB3-219ENST00000551242 M0QZ58 72 aa5.93□□□□□ -1.46
ERBB3-219ENST00000551242 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
ERBB3-219ENST00000551242 LRP2P98164 4655 aa5.84□□□□□ -1.47
ERBB3-219ENST00000551242 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
ERBB3-219ENST00000551242 R4GN34 69 aa5.79□□□□□ -1.48
ERBB3-219ENST00000551242 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
ERBB3-219ENST00000551242 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
ERBB3-219ENST00000551242 ABCA13Q86UQ4 5058 aa5.74□□□□□ -1.49
ERBB3-219ENST00000551242 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
ERBB3-219ENST00000551242 HERC2O95714 4834 aa5.61□□□□□ -1.51
ERBB3-219ENST00000551242 J3QL48 77 aa5.56□□□□□ -1.52
ERBB3-219ENST00000551242 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
ERBB3-219ENST00000551242 MUC2Q02817 5179 aa5.55□□□□□ -1.52
ERBB3-219ENST00000551242 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
ERBB3-219ENST00000551242 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
ERBB3-219ENST00000551242 HERC1Q15751 4861 aa5.45□□□□□ -1.54
ERBB3-219ENST00000551242 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
ERBB3-219ENST00000551242 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
ERBB3-219ENST00000551242 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
ERBB3-219ENST00000551242 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
ERBB3-219ENST00000551242 TNP1P09430 55 aa5.34□□□□□ -1.55
ERBB3-219ENST00000551242 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
ERBB3-219ENST00000551242 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
ERBB3-219ENST00000551242 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
ERBB3-219ENST00000551242 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
ERBB3-219ENST00000551242 RNF213Q63HN8 5207 aa5.2□□□□□ -1.58
ERBB3-219ENST00000551242 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
ERBB3-219ENST00000551242 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
ERBB3-219ENST00000551242 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
ERBB3-219ENST00000551242 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
ERBB3-219ENST00000551242 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
ERBB3-219ENST00000551242 M0R2T5 61 aa4.98□□□□□ -1.61
ERBB3-219ENST00000551242 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
ERBB3-219ENST00000551242 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
ERBB3-219ENST00000551242 INE1O15225 51 aa4.93□□□□□ -1.62
ERBB3-219ENST00000551242 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
ERBB3-219ENST00000551242 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
ERBB3-219ENST00000551242 MT1HP80294 61 aa4.83□□□□□ -1.64
ERBB3-219ENST00000551242 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
ERBB3-219ENST00000551242 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
ERBB3-219ENST00000551242 MT1FP04733 61 aa4.75□□□□□ -1.65
ERBB3-219ENST00000551242 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
ERBB3-219ENST00000551242 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
ERBB3-219ENST00000551242 MT2AP02795 61 aa4.71□□□□□ -1.65
ERBB3-219ENST00000551242 MT1XP80297 61 aa4.7□□□□□ -1.66
ERBB3-219ENST00000551242 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
ERBB3-219ENST00000551242 KMT2DO14686 5537 aa4.67□□□□□ -1.66
ERBB3-219ENST00000551242 USH2AO75445 5202 aa4.66□□□□□ -1.66
ERBB3-219ENST00000551242 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.66
ERBB3-219ENST00000551242 MT1BP07438 61 aa4.65□□□□□ -1.67
ERBB3-219ENST00000551242 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.67
ERBB3-219ENST00000551242 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
ERBB3-219ENST00000551242 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
ERBB3-219ENST00000551242 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
ERBB3-219ENST00000551242 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
ERBB3-219ENST00000551242 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
ERBB3-219ENST00000551242 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
ERBB3-219ENST00000551242 LCE2BO14633 110 aa4.39□□□□□ -1.71
ERBB3-219ENST00000551242 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
ERBB3-219ENST00000551242 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
ERBB3-219ENST00000551242 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
ERBB3-219ENST00000551242 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
ERBB3-219ENST00000551242 MT1LQ93083 61 aa4.08□□□□□ -1.76
ERBB3-219ENST00000551242 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms